RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 RIF1Q5UIP0 2472 aaKnown RBP-1.09□□□□□ -2.58
USP8-218ENST00000561330 RELNP78509 3460 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 QSER1Q2KHR3 1735 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 SPHKAPQ2M3C7 1700 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 MAPKBP1O60336 1514 aa-1.1□□□□□ -2.58
USP8-218ENST00000561330 TRBV25-1A0A075B6N4 114 aa-1.1□□□□□ -2.59
USP8-218ENST00000561330 DEFA5Q01523 94 aa-1.1□□□□□ -2.59
USP8-218ENST00000561330 UTP20O75691 2785 aaKnown RBP-1.1□□□□□ -2.59
USP8-218ENST00000561330 NBEAL2Q6ZNJ1 2754 aa-1.1□□□□□ -2.59
USP8-218ENST00000561330 CRYBG1Q9Y4K1 1723 aa-1.11□□□□□ -2.59
USP8-218ENST00000561330 SAMD9Q5K651 1589 aa-1.11□□□□□ -2.59
USP8-218ENST00000561330 UQCRHP07919 91 aa-1.11□□□□□ -2.59
USP8-218ENST00000561330 PREX1Q8TCU6 1659 aa-1.11□□□□□ -2.59
USP8-218ENST00000561330 CELSR3Q9NYQ7 3312 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 NDUFC1O43677 76 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 NDUFA3O95167 84 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 S100A12P80511 92 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 RPL13AP3Q6NVV1 102 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 ALKQ9UM73 1620 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 MLH3Q9UHC1 1453 aa-1.12□□□□□ -2.59
USP8-218ENST00000561330 RGPD8O14715 1765 aaPredicted RBP-1.13□□□□□ -2.59
USP8-218ENST00000561330 RGPD5Q99666 1765 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 D6R8Y8 96 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 GNGT2O14610 69 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 IGLC2P0DOY2 106 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 IGLC3P0DOY3 106 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 GTF2H5Q6ZYL4 71 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 MUSTN1Q8IVN3 82 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 TRIOO75962 3097 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 RGPD3A6NKT7 1758 aaPredicted RBP-1.13□□□□□ -2.59
USP8-218ENST00000561330 RGPD4Q7Z3J3 1758 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 SCN11AQ9UI33 1791 aa-1.13□□□□□ -2.59
USP8-218ENST00000561330 FAM135AQ9P2D6 1515 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 CEP290O15078 2479 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 TEX15Q9BXT5 2789 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 WDR87Q6ZQQ6 2873 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 CORTO00230 105 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 LEPROTL1O95214 131 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 HMGN1P05114 100 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 TRGV9Q99603 122 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 ACACBO00763 2458 aa-1.14□□□□□ -2.59
USP8-218ENST00000561330 ABCC2Q92887 1545 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 PZPP20742 1482 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 H7BZZ5 65 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 DLEU1O43261 78 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 COX7BP24311 80 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 RPL38P63173 70 aaKnown RBP-1.15□□□□□ -2.59
USP8-218ENST00000561330 TMEM203Q969S6 136 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 GNG8Q9UK08 70 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 S4R3F8 94 aa-1.15□□□□□ -2.59
USP8-218ENST00000561330 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.16□□□□□ -2.59
USP8-218ENST00000561330 DSPP15924 2871 aaKnown RBP-1.16□□□□□ -2.59
USP8-218ENST00000561330 EIF4G3O43432 1585 aaKnown RBP-1.16□□□□□ -2.59
USP8-218ENST00000561330 RAPGEF2Q9Y4G8 1499 aa-1.16□□□□□ -2.59
USP8-218ENST00000561330 A0A1B0GV90 55 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 DEFB110Q30KQ9 67 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 KRTAP19-5Q3LI72 72 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 ETDBQ3ZM63 59 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 COX6B2Q6YFQ2 88 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 ZNF720Q7Z2F6 126 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 PMCHL2Q9BQD1 86 aa-1.16□□□□□ -2.6
USP8-218ENST00000561330 MAGI2Q86UL8 1455 aa-1.17□□□□□ -2.6
USP8-218ENST00000561330 DNAH7Q8WXX0 4024 aa-1.17□□□□□ -2.6
USP8-218ENST00000561330 MPC2O95563 127 aa-1.17□□□□□ -2.6
USP8-218ENST00000561330 ALKAL2Q6UX46 152 aa-1.17□□□□□ -2.6
USP8-218ENST00000561330 TIAM2Q8IVF5 1701 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 DNAH8Q96JB1 4490 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 F8WEM9 126 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 MT1XP80297 61 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 MRPS10P82664 201 aaKnown RBP-1.18□□□□□ -2.6
USP8-218ENST00000561330 HMGN3Q15651 99 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 ABCA13Q86UQ4 5058 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 LRRC9Q6ZRR7 1453 aa-1.18□□□□□ -2.6
USP8-218ENST00000561330 MAP3K1Q13233 1512 aa-1.19□□□□□ -2.6
USP8-218ENST00000561330 USP9XQ93008 2570 aaPredicted RBP-1.19□□□□□ -2.6
USP8-218ENST00000561330 H0YAA0 97 aa-1.19□□□□□ -2.6
USP8-218ENST00000561330 K7EP34 96 aa-1.19□□□□□ -2.6
USP8-218ENST00000561330 UBE2D4Q9Y2X8 147 aa-1.19□□□□□ -2.6
USP8-218ENST00000561330 CLTCQ00610 1675 aaKnown RBP-1.2□□□□□ -2.6
USP8-218ENST00000561330 SUPT6HQ7KZ85 1726 aaKnown RBP-1.2□□□□□ -2.6
USP8-218ENST00000561330 ATOX1O00244 68 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 C3orf79P0CE67 100 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 COL5A1-AS1Q5SY13 56 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 GAFA1Q96PS6 74 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 PRO3102Q9H379 93 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 NRXN1Q9ULB1 1477 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 LRRC7Q96NW7 1537 aa-1.2□□□□□ -2.6
USP8-218ENST00000561330 UQCRHLA0A096LP55 91 aa-1.21□□□□□ -2.6
USP8-218ENST00000561330 LINC00158P58513 81 aa-1.21□□□□□ -2.6
USP8-218ENST00000561330 DEFB1P60022 68 aa-1.21□□□□□ -2.6
USP8-218ENST00000561330 SERP2Q8N6R1 65 aa-1.21□□□□□ -2.6
USP8-218ENST00000561330 PRDM15P57071 1507 aaPredicted RBP-1.21□□□□□ -2.6
USP8-218ENST00000561330 SRCAPQ6ZRS2 3230 aa-1.21□□□□□ -2.6
USP8-218ENST00000561330 RANBP2P49792 3224 aaKnown RBP-1.22□□□□□ -2.6
USP8-218ENST00000561330 RGPD1P0DJD0 1748 aa-1.22□□□□□ -2.6
USP8-218ENST00000561330 CSMD1Q96PZ7 3565 aa-1.22□□□□□ -2.6
USP8-218ENST00000561330 IQCF6A8MYZ5 107 aa-1.22□□□□□ -2.6
USP8-218ENST00000561330 PRLHP81277 87 aa-1.22□□□□□ -2.6
USP8-218ENST00000561330 ANKRD36BQ8N2N9 1353 aa-1.22□□□□□ -2.61
USP8-218ENST00000561330 LTN1O94822 1766 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms