RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 C10orf55Q5SWW7 151 aa3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 FRAS1Q86XX4 4008 aa3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 OTOGQ6ZRI0 2925 aa3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 MUC6Q6W4X9 2439 aa3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 NAV3Q8IVL0 2385 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 ETDCA0A1B0GVM5 59 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 DMAC1Q96GE9 116 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 NOTCH3Q9UM47 2321 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 LAMA5O15230 3695 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 TRGV2A0A075B6R0 118 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 KPRPQ5T749 579 aaPredicted RBP3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
CTDSPL2-206ENST00000559175 PDE6HQ13956 83 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 Q8N9L7 120 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 CRIP1P50238 77 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 PIEZO1Q92508 2521 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 IGKV3-7A0A075B6H7 116 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 CCL18P55774 89 aa3.55□□□□□ -1.84
CTDSPL2-206ENST00000559175 NUPR2A6NF83 97 aa3.54□□□□□ -1.84
CTDSPL2-206ENST00000559175 ANKHD1Q8IWZ3 2542 aaKnown RBP3.54□□□□□ -1.84
CTDSPL2-206ENST00000559175 PTPRQQ9UMZ3 2332 aa3.54□□□□□ -1.84
CTDSPL2-206ENST00000559175 IGLV4-60A0A075B6I1 120 aa3.54□□□□□ -1.84
CTDSPL2-206ENST00000559175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 UQCR11O14957 56 aa3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 PKHD1P08F94 4074 aa3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 C1orf137Q5JT78 98 aa3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 SMIM11BQ8TCY0 68 aa3.53□□□□□ -1.84
CTDSPL2-206ENST00000559175 A0A087WSZ3 146 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 LYNX1G3V0Z9 82 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 LYNX1P0DP58 116 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 IGKV3OR2-268A0A0C4DH90 116 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 WT1-ASQ06250 92 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 SPG11Q96JI7 2443 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 TRRAPQ9Y4A5 3859 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 IGKV4-1P06312 121 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 CNFNQ9BYD5 112 aa3.52□□□□□ -1.85
CTDSPL2-206ENST00000559175 I3L2K1 104 aa3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 LCE6AA0A183 80 aa3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 PIEZO2Q9H5I5 2752 aa3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 LOC400499M0QZD8 3231 aa3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 RPL39LQ96EH5 51 aaKnown RBP3.51□□□□□ -1.85
CTDSPL2-206ENST00000559175 DEFB104AQ8WTQ1 72 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 DNAH17Q9UFH2 4485 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 IGKV2D-40P01614 121 aaPredicted RBP3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 LINC00158P58513 81 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 A0A1B0GU33 70 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 A0A1B0GU69 56 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 NDUFA1O15239 70 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 HTN1P15515 57 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 Q5W150 140 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
CTDSPL2-206ENST00000559175 RELNP78509 3460 aa3.49□□□□□ -1.85
CTDSPL2-206ENST00000559175 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
CTDSPL2-206ENST00000559175 CUBNO60494 3623 aa3.49□□□□□ -1.85
CTDSPL2-206ENST00000559175 ST20-AS1Q8NBB2 130 aa3.49□□□□□ -1.85
CTDSPL2-206ENST00000559175 ACACBO00763 2458 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 PRRC2CQ9Y520 2896 aaKnown RBP3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 LINC00959A0A1B0GUT2 108 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 ABCA2Q9BZC7 2435 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 LY6EQ16553 131 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 C5orf56Q8N8D9 126 aa3.48□□□□□ -1.85
CTDSPL2-206ENST00000559175 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 TLN1Q9Y490 2541 aaKnown RBP3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 HUWE1Q7Z6Z7 4374 aaKnown RBP3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 M0R2N4 97 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 COX7BP24311 80 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 Q6ZQY7 126 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 R4GN34 69 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
CTDSPL2-206ENST00000559175 H3BRN7 92 aa3.46□□□□□ -1.85
CTDSPL2-206ENST00000559175 FAM208BQ5VWN6 2430 aa3.46□□□□□ -1.85
CTDSPL2-206ENST00000559175 K7EIM0 57 aa3.46□□□□□ -1.86
CTDSPL2-206ENST00000559175 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 DCHS2Q6V1P9 2916 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 MYO18BQ8IUG5 2567 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 WNK1Q9H4A3 2382 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 DEFB114Q30KQ6 69 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 SPRR4Q96PI1 79 aa3.45□□□□□ -1.86
CTDSPL2-206ENST00000559175 CSPG4Q6UVK1 2322 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 APCP25054 2843 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 SPTBN4Q9H254 2564 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 GCN1Q92616 2671 aaKnown RBP3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms