RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SMIM11BQ8TCY0 68 aa2.27□□□□□ -2.05
YBX3-210ENST00000540975 TNCP24821 2201 aa2.27□□□□□ -2.05
YBX3-210ENST00000540975 TRANK1O15050 2925 aa2.27□□□□□ -2.05
YBX3-210ENST00000540975 A0A1B0GU33 70 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 H0Y9P7 68 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 M0QY20 66 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 PDE6GP18545 87 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 USMG5Q96IX5 58 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 DNAJC13O75165 2243 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 ZGRF1Q86YA3 2104 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 MUC6Q6W4X9 2439 aa2.26□□□□□ -2.05
YBX3-210ENST00000540975 A0A096LNT2 108 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 M0R2N4 97 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 NDUFA4O00483 81 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 Q6ZTI0 123 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 DEFB123Q8N688 67 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 C9orf163Q8N9P6 203 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 WFDC10AQ9H1F0 79 aa2.25□□□□□ -2.05
YBX3-210ENST00000540975 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.24□□□□□ -2.05
YBX3-210ENST00000540975 UQCR11O14957 56 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 DEFB114Q30KQ6 69 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 FREM1Q5H8C1 2179 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 ARFGEF3Q5TH69 2177 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 BAHCC1Q9P281 2608 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 CUL9Q8IWT3 2517 aa2.24□□□□□ -2.05
YBX3-210ENST00000540975 DOCK10Q96BY6 2186 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 CNTRLQ7Z7A1 2325 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 IGKV3OR2-268A0A0C4DH90 116 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 APELAP0DMC3 54 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 SPRR4Q96PI1 79 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 CR1P17927 2039 aa2.23□□□□□ -2.05
YBX3-210ENST00000540975 AHCTF1Q8WYP5 2266 aa2.22□□□□□ -2.05
YBX3-210ENST00000540975 MKI67P46013 3256 aaKnown RBP2.22□□□□□ -2.05
YBX3-210ENST00000540975 COX6A2Q02221 97 aa2.22□□□□□ -2.05
YBX3-210ENST00000540975 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
YBX3-210ENST00000540975 DEFB104AQ8WTQ1 72 aa2.22□□□□□ -2.05
YBX3-210ENST00000540975 CADP27708 2225 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 TRGV4A0A0C4DH28 118 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 LINC00959A0A1B0GUT2 108 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 TRBV6-4A0A1B0GX49 114 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 J3QKU1 62 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 HAMPP81172 84 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 DEFB112Q30KQ8 113 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 COA5Q86WW8 74 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 C5orf56Q8N8D9 126 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 ZNF462Q96JM2 2506 aa2.21□□□□□ -2.06
YBX3-210ENST00000540975 A0A087WTM6 91 aa2.2□□□□□ -2.06
YBX3-210ENST00000540975 FAM186AA6NE01 2351 aa2.2□□□□□ -2.06
YBX3-210ENST00000540975 SDK1Q7Z5N4 2213 aa2.19□□□□□ -2.06
YBX3-210ENST00000540975 RHPN1-AS1Q9BWJ2 59 aa2.19□□□□□ -2.06
YBX3-210ENST00000540975 SZT2Q5T011 3432 aa2.19□□□□□ -2.06
YBX3-210ENST00000540975 C5orf42Q9H799 3197 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 TECTAO75443 2155 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 UNC80Q8N2C7 3258 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 ETDCA0A1B0GVM5 59 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 LINC00575Q6W349 94 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 KCNQ1DNQ9H478 68 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 LAMA3Q16787 3333 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 CDH23Q9H251 3354 aa2.18□□□□□ -2.06
YBX3-210ENST00000540975 LAMA2P24043 3122 aaKnown RBP2.17□□□□□ -2.06
YBX3-210ENST00000540975 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 TRGV2A0A075B6R0 118 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 A8MTW9 85 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 LYNX1G3V0Z9 82 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 G3V318 75 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 LYNX1P0DP58 116 aa2.17□□□□□ -2.06
YBX3-210ENST00000540975 COL6A3P12111 3177 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 XIRP2A4UGR9 3374 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 COX7BP24311 80 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 DEFB1P60022 68 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 LINC00472Q9H8W2 130 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 CEP290O15078 2479 aa2.16□□□□□ -2.06
YBX3-210ENST00000540975 ABCA4P78363 2273 aa2.15□□□□□ -2.06
YBX3-210ENST00000540975 RANBP2P49792 3224 aaKnown RBP2.15□□□□□ -2.07
YBX3-210ENST00000540975 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 COX17Q14061 63 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 C4orf3Q8WVX3 66 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 PRO2289Q9P1D8 64 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 SORL1Q92673 2214 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 ZDBF2Q9HCK1 2354 aa2.15□□□□□ -2.07
YBX3-210ENST00000540975 VCANP13611 3396 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 H3BUX3 64 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 PRB1P04280 392 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 LINC00158P58513 81 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
YBX3-210ENST00000540975 CHD8Q9HCK8 2581 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 PLCE1Q9P212 2302 aa2.14□□□□□ -2.07
YBX3-210ENST00000540975 TRGV1A0A0A0MS02 117 aa2.13□□□□□ -2.07
YBX3-210ENST00000540975 RPL37AP61513 92 aaKnown RBP2.13□□□□□ -2.07
YBX3-210ENST00000540975 Q6ZQY7 126 aa2.13□□□□□ -2.07
YBX3-210ENST00000540975 Q96NJ1 140 aa2.13□□□□□ -2.07
YBX3-210ENST00000540975 CCL19Q99731 98 aa2.13□□□□□ -2.07
YBX3-210ENST00000540975 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
YBX3-210ENST00000540975 A0A1B0GU69 56 aa2.12□□□□□ -2.07
YBX3-210ENST00000540975 SPINK13Q1W4C9 94 aa2.12□□□□□ -2.07
YBX3-210ENST00000540975 REV3LO60673 3130 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms