RNA–Protein interactions for RNA: ENST00000516539.1

RNU6-1256P-201, Transcript of RNA, U6 small nuclear 1256, pseudogene, humanhuman

BASIC

Gene RNU6-1256P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1256P-201ENST00000516539 PIK3C2BO00750 1634 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 DIP2BQ9P265 1576 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 CEP170BQ9Y4F5 1589 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 COL7A1Q02388 2944 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 A0A087WXM4 84 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 SPRR2DP22532 72 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 WFDC13Q8IUB5 93 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 KDM5DQ9BY66 1539 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 FAT2Q9NYQ8 4349 aa0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 CNOT1A5YKK6 2376 aaKnown RBP0.16□□□□□ -2.38
RNU6-1256P-201ENST00000516539 MYCBP2O75592 4640 aa0.15□□□□□ -2.38
RNU6-1256P-201ENST00000516539 EP300Q09472 2414 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 ARFGEF2Q9Y6D5 1785 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 MAGI3Q5TCQ9 1506 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 M0R2T5 61 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 USP32Q8NFA0 1604 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 APC2O95996 2303 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 DOT1LQ8TEK3 1739 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 MUC5ACP98088 5654 aa0.15□□□□□ -2.39
RNU6-1256P-201ENST00000516539 IFI6P09912 130 aa0.14□□□□□ -2.39
RNU6-1256P-201ENST00000516539 C18orf32Q8TCD1 76 aa0.14□□□□□ -2.39
RNU6-1256P-201ENST00000516539 CCDC88BA6NC98 1476 aa0.14□□□□□ -2.39
RNU6-1256P-201ENST00000516539 SCN11AQ9UI33 1791 aa0.14□□□□□ -2.39
RNU6-1256P-201ENST00000516539 NSD1Q96L73 2696 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 PTPN23Q9H3S7 1636 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 MDN1Q9NU22 5596 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 SMIM13P0DJ93 91 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 LELP1Q5T871 98 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 NWD1Q149M9 1564 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 CFAP74Q9C0B2 1584 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 ANKARQ7Z5J8 1434 aa0.13□□□□□ -2.39
RNU6-1256P-201ENST00000516539 ZNF831Q5JPB2 1677 aa0.12□□□□□ -2.39
RNU6-1256P-201ENST00000516539 NDUFA3O95167 84 aa0.12□□□□□ -2.39
RNU6-1256P-201ENST00000516539 C3orf79P0CE67 100 aa0.12□□□□□ -2.39
RNU6-1256P-201ENST00000516539 RRBP1Q9P2E9 1410 aaKnown RBP0.12□□□□□ -2.39
RNU6-1256P-201ENST00000516539 TNRC6CQ9HCJ0 1690 aaKnown RBP0.11□□□□□ -2.39
RNU6-1256P-201ENST00000516539 LCE6AA0A183 80 aa0.11□□□□□ -2.39
RNU6-1256P-201ENST00000516539 NREPQ16612 68 aa0.11□□□□□ -2.39
RNU6-1256P-201ENST00000516539 PRKDCP78527 4128 aaKnown RBP0.1□□□□□ -2.39
RNU6-1256P-201ENST00000516539 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
RNU6-1256P-201ENST00000516539 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
RNU6-1256P-201ENST00000516539 TNXBP22105 4242 aa0.1□□□□□ -2.39
RNU6-1256P-201ENST00000516539 SETXQ7Z333 2677 aaKnown RBP0.1□□□□□ -2.39
RNU6-1256P-201ENST00000516539 ALMS1Q8TCU4 4167 aa0.09□□□□□ -2.39
RNU6-1256P-201ENST00000516539 ACANP16112 2415 aa0.09□□□□□ -2.39
RNU6-1256P-201ENST00000516539 NESP48681 1621 aa0.09□□□□□ -2.39
RNU6-1256P-201ENST00000516539 LPAP08519 4548 aa0.09□□□□□ -2.39
RNU6-1256P-201ENST00000516539 DEFB135Q30KP9 77 aa0.09□□□□□ -2.4
RNU6-1256P-201ENST00000516539 PRO3102Q9H379 93 aa0.09□□□□□ -2.4
RNU6-1256P-201ENST00000516539 KNL1Q8NG31 2342 aa0.09□□□□□ -2.4
RNU6-1256P-201ENST00000516539 MAP3K1Q13233 1512 aa0.08□□□□□ -2.4
RNU6-1256P-201ENST00000516539 KMT2DO14686 5537 aa0.08□□□□□ -2.4
RNU6-1256P-201ENST00000516539 FLNBO75369 2602 aaKnown RBP0.08□□□□□ -2.4
RNU6-1256P-201ENST00000516539 NDUFA4O00483 81 aa0.08□□□□□ -2.4
RNU6-1256P-201ENST00000516539 C4AP0C0L4 1744 aa0.07□□□□□ -2.4
RNU6-1256P-201ENST00000516539 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
RNU6-1256P-201ENST00000516539 ANKRD50Q9ULJ7 1429 aa0.07□□□□□ -2.4
RNU6-1256P-201ENST00000516539 SPRR2BP35325 72 aa0.07□□□□□ -2.4
RNU6-1256P-201ENST00000516539 CFAP43Q8NDM7 1665 aa0.07□□□□□ -2.4
RNU6-1256P-201ENST00000516539 PDE4DIPQ5VU43 2346 aa0.06□□□□□ -2.4
RNU6-1256P-201ENST00000516539 DDX60LQ5H9U9 1706 aaKnown RBP0.06□□□□□ -2.4
RNU6-1256P-201ENST00000516539 HECTD4Q9Y4D8 3996 aa0.06□□□□□ -2.4
RNU6-1256P-201ENST00000516539 CICQ96RK0 1608 aaPredicted RBP0.05□□□□□ -2.4
RNU6-1256P-201ENST00000516539 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
RNU6-1256P-201ENST00000516539 LINC00158P58513 81 aa0.05□□□□□ -2.4
RNU6-1256P-201ENST00000516539 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
RNU6-1256P-201ENST00000516539 PLCH1Q4KWH8 1693 aa0.05□□□□□ -2.4
RNU6-1256P-201ENST00000516539 ABCA8O94911 1581 aa0.04□□□□□ -2.4
RNU6-1256P-201ENST00000516539 STAB2Q8WWQ8 2551 aa0.03□□□□□ -2.4
RNU6-1256P-201ENST00000516539 PCNX1Q96RV3 2341 aa0.03□□□□□ -2.41
RNU6-1256P-201ENST00000516539 CREBBPQ92793 2442 aa0.03□□□□□ -2.41
RNU6-1256P-201ENST00000516539 HSPG2P98160 4391 aa0.03□□□□□ -2.41
RNU6-1256P-201ENST00000516539 CD163L1Q9NR16 1453 aa0.03□□□□□ -2.41
RNU6-1256P-201ENST00000516539 WIZO95785 1651 aa0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 NBASA2RRP1 2371 aa0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 H0YGG7 62 aa0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 MRPL33O75394 65 aaKnown RBP0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 SMCO4Q9NRQ5 59 aa0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 TENM2Q9NT68 2774 aa0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 RICTORQ6R327 1708 aa0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 DEFB131BA0A096LNP1 70 aa0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 DEPDC5O75140 1603 aa0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 H3BVH4 76 aa0□□□□□ -2.41
RNU6-1256P-201ENST00000516539 PDCD5O14737 125 aa0□□□□□ -2.41
RNU6-1256P-201ENST00000516539 STAB1Q9NY15 2570 aa0□□□□□ -2.41
RNU6-1256P-201ENST00000516539 TRANK1O15050 2925 aa-0□□□□□ -2.41
RNU6-1256P-201ENST00000516539 PLXNC1O60486 1568 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 ADAMTS12P58397 1594 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 RALGAPBQ86X10 1494 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 SETD2Q9BYW2 2564 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 UBL5Q9BZL1 73 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 COL6A3P12111 3177 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
RNU6-1256P-201ENST00000516539 REV3LO60673 3130 aa-0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 LYNX1G3V0Z9 82 aa-0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 KCNQ1DNQ9H478 68 aa-0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 LRP2P98164 4655 aa-0.02□□□□□ -2.41
RNU6-1256P-201ENST00000516539 TJP1Q07157 1748 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms