RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 GAFA1Q96PS6 74 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 TTTY12Q9BZ98 90 aa1.56□□□□□ -2.16
SSR1-209ENST00000488834 ZFHX2Q9C0A1 2572 aaPredicted RBP1.56□□□□□ -2.16
SSR1-209ENST00000488834 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 LINC00959A0A1B0GUT2 108 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 LINC00158P58513 81 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 COX6A2Q02221 97 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 C10orf55Q5SWW7 151 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 COA5Q86WW8 74 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 Q9Y3F1 56 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 TECTAO75443 2155 aa1.55□□□□□ -2.16
SSR1-209ENST00000488834 H0Y9P7 68 aa1.54□□□□□ -2.16
SSR1-209ENST00000488834 CD52P31358 61 aa1.54□□□□□ -2.16
SSR1-209ENST00000488834 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
SSR1-209ENST00000488834 KLK9Q2XQG4 91 aa1.54□□□□□ -2.16
SSR1-209ENST00000488834 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
SSR1-209ENST00000488834 SPRR4Q96PI1 79 aa1.54□□□□□ -2.16
SSR1-209ENST00000488834 MRPL33O75394 65 aaKnown RBP1.53□□□□□ -2.16
SSR1-209ENST00000488834 DEFB110Q30KQ9 67 aa1.53□□□□□ -2.16
SSR1-209ENST00000488834 C1orf137Q5JT78 98 aa1.53□□□□□ -2.16
SSR1-209ENST00000488834 KRTAP26-1Q6PEX3 210 aa1.53□□□□□ -2.16
SSR1-209ENST00000488834 RP1L1Q8IWN7 2480 aaPredicted RBP1.53□□□□□ -2.16
SSR1-209ENST00000488834 WNK2Q9Y3S1 2297 aa1.53□□□□□ -2.16
SSR1-209ENST00000488834 ZFHX3Q15911 3703 aa1.53□□□□□ -2.17
SSR1-209ENST00000488834 DEFB112Q30KQ8 113 aa1.52□□□□□ -2.17
SSR1-209ENST00000488834 SPACA4Q8TDM5 124 aa1.52□□□□□ -2.17
SSR1-209ENST00000488834 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 PRB1P04280 392 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 Q6ZQY7 126 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 DEFB104AQ8WTQ1 72 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 C4orf3Q8WVX3 66 aa1.51□□□□□ -2.17
SSR1-209ENST00000488834 CACNA1GO43497 2377 aa1.5□□□□□ -2.17
SSR1-209ENST00000488834 FN1P02751 2386 aaKnown RBP1.5□□□□□ -2.17
SSR1-209ENST00000488834 DEFB131BA0A096LNP1 70 aa1.5□□□□□ -2.17
SSR1-209ENST00000488834 UQCR11O14957 56 aa1.5□□□□□ -2.17
SSR1-209ENST00000488834 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
SSR1-209ENST00000488834 COX17Q14061 63 aa1.5□□□□□ -2.17
SSR1-209ENST00000488834 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
SSR1-209ENST00000488834 IGLV5-48A0A075B6I7 105 aa1.49□□□□□ -2.17
SSR1-209ENST00000488834 NUPR2A6NF83 97 aa1.49□□□□□ -2.17
SSR1-209ENST00000488834 Q8IZM0 81 aa1.49□□□□□ -2.17
SSR1-209ENST00000488834 PATE1Q8WXA2 126 aa1.49□□□□□ -2.17
SSR1-209ENST00000488834 USP24Q9UPU5 2620 aa1.49□□□□□ -2.17
SSR1-209ENST00000488834 IGKV3-7A0A075B6H7 116 aa1.48□□□□□ -2.17
SSR1-209ENST00000488834 APELAP0DMC3 54 aa1.48□□□□□ -2.17
SSR1-209ENST00000488834 CCL3L1P16619 93 aa1.48□□□□□ -2.17
SSR1-209ENST00000488834 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
SSR1-209ENST00000488834 CNOT1A5YKK6 2376 aaKnown RBP1.48□□□□□ -2.17
SSR1-209ENST00000488834 SPTBN1Q01082 2364 aaKnown RBP1.48□□□□□ -2.17
SSR1-209ENST00000488834 ANKRD17O75179 2603 aaKnown RBP1.47□□□□□ -2.17
SSR1-209ENST00000488834 IGKV3OR2-268A0A0C4DH90 116 aa1.47□□□□□ -2.17
SSR1-209ENST00000488834 LINC00472Q9H8W2 130 aa1.47□□□□□ -2.17
SSR1-209ENST00000488834 KAAG1Q9UBP8 84 aa1.47□□□□□ -2.17
SSR1-209ENST00000488834 COL6A6A6NMZ7 2263 aa1.47□□□□□ -2.17
SSR1-209ENST00000488834 SPTY2D1-AS1A0A0U1RR47 76 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 K7EQZ3 153 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 DEFB103AP81534 67 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 MINOS1Q5TGZ0 78 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 PRO3102Q9H379 93 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 TOMM7Q9P0U1 55 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 ALMS1Q8TCU4 4167 aa1.46□□□□□ -2.18
SSR1-209ENST00000488834 TRGV1A0A0A0MS02 117 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 A0A1B0GU69 56 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 ACYP2P14621 99 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 DEFB108BQ8NET1 73 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 TP53AIP1Q9HCN2 124 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 SRCAPQ6ZRS2 3230 aa1.45□□□□□ -2.18
SSR1-209ENST00000488834 A0A087WTM6 91 aa1.44□□□□□ -2.18
SSR1-209ENST00000488834 A8MTW9 85 aa1.44□□□□□ -2.18
SSR1-209ENST00000488834 WFDC13Q8IUB5 93 aa1.44□□□□□ -2.18
SSR1-209ENST00000488834 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
SSR1-209ENST00000488834 WDR87Q6ZQQ6 2873 aa1.43□□□□□ -2.18
SSR1-209ENST00000488834 GVQW2A0A096LPI5 108 aaPredicted RBP1.43□□□□□ -2.18
SSR1-209ENST00000488834 LYNX1G3V0Z9 82 aa1.43□□□□□ -2.18
SSR1-209ENST00000488834 ANGP03950 147 aaKnown RBP1.43□□□□□ -2.18
SSR1-209ENST00000488834 DEFB1P60022 68 aa1.43□□□□□ -2.18
SSR1-209ENST00000488834 APC2O95996 2303 aa1.43□□□□□ -2.18
SSR1-209ENST00000488834 CACNA1BQ00975 2339 aa1.43□□□□□ -2.18
SSR1-209ENST00000488834 ACACAQ13085 2346 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 DEFB132Q7Z7B7 95 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 WFDC10BQ8IUB3 73 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 Q96NJ1 140 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 CCL19Q99731 98 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 BAHCC1Q9P281 2608 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 A0A0C4DFX4 3053 aa1.42□□□□□ -2.18
SSR1-209ENST00000488834 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
SSR1-209ENST00000488834 Q6ZRN7 208 aaPredicted RBP1.41□□□□□ -2.18
SSR1-209ENST00000488834 USMG5Q96IX5 58 aa1.41□□□□□ -2.18
SSR1-209ENST00000488834 RHPN1-AS1Q9BWJ2 59 aa1.41□□□□□ -2.18
SSR1-209ENST00000488834 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.41□□□□□ -2.181e-27■■□□□ 13.9
SSR1-209ENST00000488834 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.18
SSR1-209ENST00000488834 MGAQ8IWI9 3026 aa1.4□□□□□ -2.18
SSR1-209ENST00000488834 IGF2RP11717 2491 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 WNK1Q9H4A3 2382 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 ZDBF2Q9HCK1 2354 aa1.4□□□□□ -2.19
SSR1-209ENST00000488834 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.19
SSR1-209ENST00000488834 NBDYA0A0U1RRE5 68 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms