RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 FAM168BA1KXE4 195 aa3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 IGKV2-29A2NJV5 120 aaPredicted RBP3.77□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 USP9XQ93008 2570 aaPredicted RBP3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 BRD3OSQ6XYD6 125 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CSPG4Q6UVK1 2322 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CLPSL1A2RUU4 121 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 A8MU10 97 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CELSR1Q9NYQ6 3014 aa3.75□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 IGLV10-54A0A075B6I4 117 aa3.75□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.75□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 A0A087WSZ3 146 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 H3BUX3 64 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 PSCAO43653 123 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LY6EQ16553 131 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 USMG5Q96IX5 58 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 ANKRD17O75179 2603 aaKnown RBP3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CRYBG3Q68DQ2 2970 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 FAM208BQ5VWN6 2430 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 H3BUA1 57 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 HAMPP81172 84 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CELSR2Q9HCU4 2923 aa3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 USP9YO00507 2555 aaPredicted RBP3.74□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 VPS13CQ709C8 3753 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 CENPEQ02224 2701 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 TRBV10-1A0A0K0K1A3 114 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 H3BQ85 93 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 NDUFA4O00483 81 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 PRR9Q5T870 116 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LRRK2Q5S007 2527 aa3.73□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 UTP20O75691 2785 aaKnown RBP3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 ZFYVE26Q68DK2 2539 aa3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 LRCOL1A6NCL2 159 aa3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 PDE6GP18545 87 aa3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 DEFB104AQ8WTQ1 72 aa3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 ZFHX3Q15911 3703 aa3.72□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 M0QY20 66 aa3.71□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 Q6ZTI0 123 aa3.71□□□□□ -1.81
ALMS1-IT1-201ENST00000441587 ZNF462Q96JM2 2506 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV2-28A0A075B6P5 120 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 LOC101927531A0A1B0GV80 90 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV2D-28P01615 120 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 HIGD2AQ9BW72 106 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 BAHCC1Q9P281 2608 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 DOPEY2Q9Y3R5 2298 aa3.71□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 POLQO75417 2590 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 USP24Q9UPU5 2620 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 MUC4Q99102 2169 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 LCE6AA0A183 80 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGHV3-53P01767 116 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 RHPN1-AS1Q9BWJ2 59 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 KRTAP29-1A8MX34 341 aaPredicted RBP3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV3-20P01619 116 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 P0C880 135 aa3.7□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CREBBPQ92793 2442 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 ZANQ9Y493 2812 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV3-7A0A075B6H7 116 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 PANO1I0J062 215 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 DEFB112Q30KQ8 113 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 NAV2Q8IVL1 2488 aa3.69□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CSAG1Q6PB30 78 aa3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 ABCA12Q86UK0 2595 aa3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 PRB1P04280 392 aa3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 SPANXA2-OT1Q8N9U9 137 aa3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 MYO9AB2RTY4 2548 aa3.68□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 UBR5O95071 2799 aaPredicted RBP3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 A0A096LNT2 108 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 RTL8CO15255 209 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGLV7-43P04211 117 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 ELOF1P60002 83 aaKnown RBP3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 DEFB1P60022 68 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 MXRA5Q9NR99 2828 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 SORL1Q92673 2214 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 TEX15Q9BXT5 2789 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 EPG5Q9HCE0 2579 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 FAM74A4Q5TZK3 123 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 Q6ZR54 194 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 MAPK1IP1LQ8NDC0 245 aa3.67□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CR1P17927 2039 aa3.66□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 TLN2Q9Y4G6 2542 aa3.66□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CSMD2Q7Z408 3487 aa3.66□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 IGKV4-1P06312 121 aa3.65□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 CCL18P55774 89 aa3.65□□□□□ -1.82
ALMS1-IT1-201ENST00000441587 COX6A2Q02221 97 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms