RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 IGKV2-29A2NJV5 120 aaPredicted RBP8.05□□□□□ -1.12
LINC00538-201ENST00000626109 COX7CP15954 63 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 NPC2P61916 151 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
LINC00538-201ENST00000626109 CEMP1Q6PRD7 247 aaPredicted RBP8.05□□□□□ -1.12
LINC00538-201ENST00000626109 Q6ZSN1 163 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
LINC00538-201ENST00000626109 SLC25A20O43772 301 aa8.04□□□□□ -1.12
LINC00538-201ENST00000626109 SS18Q15532 418 aa8.04□□□□□ -1.12
LINC00538-201ENST00000626109 TRBV10-1A0A0K0K1A3 114 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 H7C2G1 150 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 PRM2P04554 102 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 MIAQ16674 131 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 UBE2BP63146 152 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 RPL36AP83881 106 aaKnown RBP8.03□□□□□ -1.12
LINC00538-201ENST00000626109 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
LINC00538-201ENST00000626109 RPL36ALQ969Q0 106 aaKnown RBP8.03□□□□□ -1.12
LINC00538-201ENST00000626109 LITAFQ99732 161 aa8.03□□□□□ -1.12
LINC00538-201ENST00000626109 IGLV5-52A0A0A0MRZ9 124 aa8.02□□□□□ -1.13
LINC00538-201ENST00000626109 TRGV1A0A0A0MS02 117 aa8.01□□□□□ -1.13
LINC00538-201ENST00000626109 NDUFA1O15239 70 aa8.01□□□□□ -1.13
LINC00538-201ENST00000626109 MIFP14174 115 aa8.01□□□□□ -1.13
LINC00538-201ENST00000626109 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
LINC00538-201ENST00000626109 LINC00588Q9Y4M8 146 aa8.01□□□□□ -1.13
LINC00538-201ENST00000626109 C16orf74Q96GX8 76 aa8□□□□□ -1.13
LINC00538-201ENST00000626109 LINC01600Q96MT4 127 aa8□□□□□ -1.13
LINC00538-201ENST00000626109 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
LINC00538-201ENST00000626109 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 ADAMTSL4-AS1Q5T5F5 129 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 CDKN2A-AS1Q9UH64 79 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
LINC00538-201ENST00000626109 MEGF8Q7Z7M0 2845 aa7.98□□□□□ -1.13
LINC00538-201ENST00000626109 Q8NAQ8 132 aa7.98□□□□□ -1.13
LINC00538-201ENST00000626109 IGLV5-39A0A0G2JS06 123 aa7.96□□□□□ -1.13
LINC00538-201ENST00000626109 H7C423 109 aa7.96□□□□□ -1.13
LINC00538-201ENST00000626109 DEFB4AO15263 64 aa7.96□□□□□ -1.13
LINC00538-201ENST00000626109 A0A0J9YWU9 116 aa7.95□□□□□ -1.14
LINC00538-201ENST00000626109 COX6A2Q02221 97 aa7.95□□□□□ -1.14
LINC00538-201ENST00000626109 C2orf82Q6UX34 121 aa7.95□□□□□ -1.14
LINC00538-201ENST00000626109 Q6ZTI0 123 aa7.95□□□□□ -1.14
LINC00538-201ENST00000626109 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
LINC00538-201ENST00000626109 hADV29S1A0JD25 119 aa7.94□□□□□ -1.14
LINC00538-201ENST00000626109 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
LINC00538-201ENST00000626109 NOP10Q9NPE3 64 aaKnown RBP7.94□□□□□ -1.14
LINC00538-201ENST00000626109 CDC42SE2Q9NRR3 84 aa7.94□□□□□ -1.14
LINC00538-201ENST00000626109 TRGV2A0A075B6R0 118 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 SPART-AS1P0CW21 52 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 DAND5Q8N907 189 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 FBN3Q75N90 2809 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 C7orf65Q6ZTY9 151 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 CELA1Q9UNI1 258 aa7.93□□□□□ -1.14
LINC00538-201ENST00000626109 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
LINC00538-201ENST00000626109 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
LINC00538-201ENST00000626109 NACAE9PAV3 2078 aa7.92□□□□□ -1.14
LINC00538-201ENST00000626109 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
LINC00538-201ENST00000626109 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
LINC00538-201ENST00000626109 Q6ZRP5 223 aa7.91□□□□□ -1.14
LINC00538-201ENST00000626109 TRGV4A0A0C4DH28 118 aa7.9□□□□□ -1.14
LINC00538-201ENST00000626109 DEFB130BP0DP73 79 aa7.9□□□□□ -1.14
LINC00538-201ENST00000626109 DEFB130AP0DP74 79 aa7.9□□□□□ -1.14
LINC00538-201ENST00000626109 NBEAL2Q6ZNJ1 2754 aa7.9□□□□□ -1.15
LINC00538-201ENST00000626109 TRBV7-7A0A0K0K1E9 115 aa7.9□□□□□ -1.15
LINC00538-201ENST00000626109 TEX49A0A1B0GTD5 131 aa7.9□□□□□ -1.15
LINC00538-201ENST00000626109 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.15
LINC00538-201ENST00000626109 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.15
LINC00538-201ENST00000626109 IGLV5-37A0A075B6J1 123 aa7.89□□□□□ -1.15
LINC00538-201ENST00000626109 RPL37AP8A6NKH3 93 aa7.89□□□□□ -1.15
LINC00538-201ENST00000626109 CXCL6P80162 114 aa7.89□□□□□ -1.15
LINC00538-201ENST00000626109 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
LINC00538-201ENST00000626109 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
LINC00538-201ENST00000626109 SOSTDC1Q6X4U4 206 aa7.88□□□□□ -1.15
LINC00538-201ENST00000626109 TRAV13-2A0A0B4J235 113 aa7.87□□□□□ -1.15
LINC00538-201ENST00000626109 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC00538-201ENST00000626109 NANOS2P60321 138 aaKnown RBP7.87□□□□□ -1.15
LINC00538-201ENST00000626109 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
LINC00538-201ENST00000626109 TENM3Q9P273 2699 aa7.86□□□□□ -1.15
LINC00538-201ENST00000626109 DNAH9Q9NYC9 4486 aa7.86□□□□□ -1.15
LINC00538-201ENST00000626109 Q6ZTC4 211 aa7.86□□□□□ -1.15
LINC00538-201ENST00000626109 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
LINC00538-201ENST00000626109 TRBV6-8A0A0A6YYG3 113 aa7.85□□□□□ -1.15
LINC00538-201ENST00000626109 ACYP1P07311 99 aa7.85□□□□□ -1.15
LINC00538-201ENST00000626109 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.15
LINC00538-201ENST00000626109 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
LINC00538-201ENST00000626109 HTN3P15516 51 aa7.84□□□□□ -1.15
LINC00538-201ENST00000626109 FHL2Q14192 279 aa7.84□□□□□ -1.16
LINC00538-201ENST00000626109 TRAV10A0A0B4J240 114 aa7.83□□□□□ -1.16
LINC00538-201ENST00000626109 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 CRPP02741 224 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 C15orf53Q8NAA6 179 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 TOMM7Q9P0U1 55 aa7.82□□□□□ -1.16
LINC00538-201ENST00000626109 RPL28P46779 137 aaKnown RBP7.81□□□□□ -1.16
LINC00538-201ENST00000626109 UBE2AP49459 152 aa7.81□□□□□ -1.16
LINC00538-201ENST00000626109 LINC00158P58513 81 aa7.81□□□□□ -1.16
LINC00538-201ENST00000626109 IGKV3OR2-268A0A0C4DH90 116 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms