RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SORL1Q92673 2214 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 PTPRQQ9UMZ3 2332 aa0.91□□□□□ -2.26
CHD9-209ENST00000564255 RANBP2P49792 3224 aaKnown RBP0.91□□□□□ -2.26
CHD9-209ENST00000564255 LOC110117498A0A087WWA1 95 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 TRBV6-8A0A0A6YYG3 113 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 IGKV3D-7A0A0C4DH55 119 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 IGKV3OR2-268A0A0C4DH90 116 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 SPTBN2O15020 2390 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 TRANK1O15050 2925 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 IGLV3-1P01715 115 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 FREM3P0C091 2139 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 IGF2RP11717 2491 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 PLGLAQ15195 96 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 AMELXQ99217 191 aa0.9□□□□□ -2.26
CHD9-209ENST00000564255 GOLGB1Q14789 3259 aaKnown RBP0.9□□□□□ -2.26
CHD9-209ENST00000564255 ZGRF1Q86YA3 2104 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 KMT2DO14686 5537 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 TRBV6-4A0A1B0GX49 114 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 CCL3L1P16619 93 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 GCHFRP30047 84 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 CD52P31358 61 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 SSBP1Q04837 148 aaKnown RBP0.9□□□□□ -2.27
CHD9-209ENST00000564255 C6orf201Q7Z4U5 140 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 PROK2Q9HC23 129 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 PSENENQ9NZ42 101 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 V9GYH0 126 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 DOPEY2Q9Y3R5 2298 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 FBN2P35556 2912 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 ANKRD36A6QL64 1941 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 FN1P02751 2386 aaKnown RBP0.9□□□□□ -2.27
CHD9-209ENST00000564255 AHCTF1Q8WYP5 2266 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 TET1Q8NFU7 2136 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 DOCK11Q5JSL3 2073 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 A0A1B0GWA3 101 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 CEBPZOSA8MTT3 80 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 M0R2N4 97 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 FXYD1O00168 92 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 INE1O15225 51 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 PPP1R17O96001 155 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 ARMS2P0C7Q2 107 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 F8P00451 2351 aa0.9□□□□□ -2.27
CHD9-209ENST00000564255 HERC1Q15751 4861 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 PPYP01298 95 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 C3orf79P0CE67 100 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 ATP5EP2Q5VTU8 51 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 Q6JHZ5 121 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 COX7B2Q8TF08 81 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 KLK9Q9UKQ9 250 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 ARL2-SNX15V9GYD0 113 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 LAMA2P24043 3122 aaKnown RBP0.89□□□□□ -2.27
CHD9-209ENST00000564255 IGSF10Q6WRI0 2623 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 SPG11Q96JI7 2443 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 APC2O95996 2303 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 ACACAQ13085 2346 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 JMJD7-PLA2G4BH0Y9G9 81 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 SPAG11BQ08648 103 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 FAM74A4Q5TZK3 123 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 SPAG11AQ6PDA7 123 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 UBE2D4Q9Y2X8 147 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 EYSQ5T1H1 3165 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 NINQ8N4C6 2090 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 CACNA1EQ15878 2313 aa0.89□□□□□ -2.27
CHD9-209ENST00000564255 SDK1Q7Z5N4 2213 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 ZFHX4Q86UP3 3567 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 SPINT3P49223 89 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 CCL18P55774 89 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 HILPDAQ9Y5L2 63 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
CHD9-209ENST00000564255 ASXL3Q9C0F0 2248 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 IGKV2-40A0A087WW87 121 aaPredicted RBP0.88□□□□□ -2.27
CHD9-209ENST00000564255 TRBV7-4A0A0J9YYF1 115 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 LEPROTL1O95214 131 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 IGKV2D-40P01614 121 aaPredicted RBP0.88□□□□□ -2.27
CHD9-209ENST00000564255 IFI27P40305 119 aaPredicted RBP0.88□□□□□ -2.27
CHD9-209ENST00000564255 PPP1R1CQ8WVI7 109 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 PRR15LQ9BU68 103 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 SNURFQ9Y675 71 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 LINC01558Q9Y6Z2 57 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 MTORP42345 2549 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 MKI67P46013 3256 aaKnown RBP0.88□□□□□ -2.27
CHD9-209ENST00000564255 NAV3Q8IVL0 2385 aa0.88□□□□□ -2.27
CHD9-209ENST00000564255 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 MED13LQ71F56 2210 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 A0A087WTM6 91 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 NBDYA0A0U1RRE5 68 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 IGKV2-29A2NJV5 120 aaPredicted RBP0.87□□□□□ -2.27
CHD9-209ENST00000564255 D6R8Y8 96 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 F8VRH5 84 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 MUSTN1Q8IVN3 82 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 MED12Q93074 2177 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 RYR3Q15413 4870 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 HEATR1Q9H583 2144 aaKnown RBP0.87□□□□□ -2.27
CHD9-209ENST00000564255 MED13Q9UHV7 2174 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 LAMA3Q16787 3333 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 UBR5O95071 2799 aaPredicted RBP0.87□□□□□ -2.27
CHD9-209ENST00000564255 DNAL4O96015 105 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 RPL37AP61513 92 aaKnown RBP0.87□□□□□ -2.27
CHD9-209ENST00000564255 WFDC10AQ9H1F0 79 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 R4GMQ9 66 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms