RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 GIG44P09565 113 aaPredicted RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 DNAH10OSP0CZ25 163 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 PDE6GP18545 87 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 RBM3P98179 157 aaKnown RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 C9orf129Q5T035 196 aaKnown RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 UBL5Q9BZL1 73 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 REV3LO60673 3130 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 RP1L1Q8IWN7 2480 aaPredicted RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 GPR179Q6PRD1 2367 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 APC2O95996 2303 aa3.04□□□□□ -1.92
RTN4-215ENST00000491592 RANBP2P49792 3224 aaKnown RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 LAMA2P24043 3122 aaKnown RBP3.04□□□□□ -1.92
RTN4-215ENST00000491592 DOPEY2Q9Y3R5 2298 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 IGKV2-28A0A075B6P5 120 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 IGKV2D-28P01615 120 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 LINC00158P58513 81 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 ROMO1P60602 79 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 LINC00269Q8N2A0 174 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 LAMA3Q16787 3333 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 WDR87Q6ZQQ6 2873 aa3.03□□□□□ -1.92
RTN4-215ENST00000491592 SPTBN2O15020 2390 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 CACNA1HO95180 2353 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 TRBV6-4A0A1B0GX49 114 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 CCL18P55774 89 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 FAM229BQ4G0N7 80 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 Q6ZQT0 140 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
RTN4-215ENST00000491592 SZT2Q5T011 3432 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 A0A087WVE0 104 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 LOC110117498A0A087WWA1 95 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 H3BUX3 64 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 H7BZZ5 65 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 NCR3O14931 201 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 HTN1P15515 57 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 LY6EQ16553 131 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 C1orf134Q5TEV5 83 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 BPESC1Q9GZL8 116 aa3.01□□□□□ -1.93
RTN4-215ENST00000491592 TRAV23DV6A0A075B6W5 121 aa3□□□□□ -1.93
RTN4-215ENST00000491592 FAM168BA1KXE4 195 aa3□□□□□ -1.93
RTN4-215ENST00000491592 DEFB131AP59861 70 aa3□□□□□ -1.93
RTN4-215ENST00000491592 ENHOQ6UWT2 76 aa3□□□□□ -1.93
RTN4-215ENST00000491592 CYP4F30PQ9H0H9 118 aa3□□□□□ -1.93
RTN4-215ENST00000491592 XIRP2A4UGR9 3374 aa3□□□□□ -1.93
RTN4-215ENST00000491592 NCOR1O75376 2440 aa3□□□□□ -1.93
RTN4-215ENST00000491592 ANKHD1Q8IWZ3 2542 aaKnown RBP2.99□□□□□ -1.93
RTN4-215ENST00000491592 ACACAQ13085 2346 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 MAP1BP46821 2468 aaKnown RBP2.99□□□□□ -1.93
RTN4-215ENST00000491592 COL6A6A6NMZ7 2263 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 TRIOBPQ9H2D6 2365 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 COX17Q14061 63 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 DEFB116Q30KQ4 102 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 C9orf116Q5BN46 136 aaPredicted RBP2.99□□□□□ -1.93
RTN4-215ENST00000491592 BRD3OSQ6XYD6 125 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 CDH23Q9H251 3354 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 SORL1Q92673 2214 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 LAMA1P25391 3075 aa2.99□□□□□ -1.93
RTN4-215ENST00000491592 SPTBN1Q01082 2364 aaKnown RBP2.98□□□□□ -1.93
RTN4-215ENST00000491592 IGLV10-54A0A075B6I4 117 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 A0A087WSZ3 146 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 Q8IZM0 81 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 DEFB123Q8N688 67 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 TMEM254Q8TBM7 123 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
RTN4-215ENST00000491592 B4DSR2 109 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 PANO1I0J062 215 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 KRTAP10-3P60369 221 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 Q5W150 140 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 LINC00575Q6W349 94 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 OTOGLQ3ZCN5 2332 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 PTPRQQ9UMZ3 2332 aa2.97□□□□□ -1.93
RTN4-215ENST00000491592 TRBV6-8A0A0A6YYG3 113 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 LINC00959A0A1B0GUT2 108 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 F8WEM9 126 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 MIFP14174 115 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 DEFB114Q30KQ6 69 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 LINC00474Q9P2X8 69 aa2.96□□□□□ -1.94
RTN4-215ENST00000491592 PTPRZ1P23471 2315 aaPredicted RBP2.95□□□□□ -1.94
RTN4-215ENST00000491592 A0A096LNT2 108 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 HAMPP81172 84 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 Q6ZTI0 123 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 ST20-AS1Q8NBB2 130 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 WFDC9Q8NEX5 89 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 C4orf3Q8WVX3 66 aa2.95□□□□□ -1.94
RTN4-215ENST00000491592 EP300Q09472 2414 aaPredicted RBP2.94□□□□□ -1.94
RTN4-215ENST00000491592 IGLV4-60A0A075B6I1 120 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 TRAV10A0A0B4J240 114 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 TRGV4A0A0C4DH28 118 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 TRBV7-4A0A0J9YYF1 115 aa2.94□□□□□ -1.94
RTN4-215ENST00000491592 A0A1B0GU33 70 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms