RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PIEZO2Q9H5I5 2752 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 HELZ2Q9BYK8 2649 aaKnown RBP1.7□□□□□ -2.14
VPS41-206ENST00000418457 HECTD1Q9ULT8 2610 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 PTPRZ1P23471 2315 aaPredicted RBP1.69□□□□□ -2.14
VPS41-206ENST00000418457 PCNX1Q96RV3 2341 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 ZNF462Q96JM2 2506 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 IGHV3-73A0A0B4J1V6 119 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 TRBV6-4A0A1B0GX49 114 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 LECT2O14960 151 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 LINC00158P58513 81 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 DEFB131AP59861 70 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 BLCAPP62952 87 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 COX6A2Q02221 97 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 COX17Q14061 63 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 RBMY1FQ15415 496 aaKnown RBP1.69□□□□□ -2.14
VPS41-206ENST00000418457 KRTAP13-3Q3SY46 172 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 RNASE13Q5GAN3 156 aaKnown RBP1.69□□□□□ -2.14
VPS41-206ENST00000418457 LYPD5Q6UWN5 251 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 Q8N2B8 174 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 MIR7-3HGQ8N6C7 128 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 LINC00337Q8N6G1 96 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 SMIM11BQ8TCY0 68 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 DEFB104AQ8WTQ1 72 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 LINC00846Q9NV44 126 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 C22orf24Q9Y442 160 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 SERP1Q9Y6X1 66 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 OTOGQ6ZRI0 2925 aa1.69□□□□□ -2.14
VPS41-206ENST00000418457 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
VPS41-206ENST00000418457 CNOT1A5YKK6 2376 aaKnown RBP1.69□□□□□ -2.14
VPS41-206ENST00000418457 CRYBG3Q68DQ2 2970 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 ACACAQ13085 2346 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 CELSR1Q9NYQ6 3014 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 DOPEY2Q9Y3R5 2298 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 FLNBO75369 2602 aaKnown RBP1.68□□□□□ -2.14
VPS41-206ENST00000418457 IGKV2-28A0A075B6P5 120 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 TRAV7A0A075B6U4 112 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 LOC110117498A0A087WWA1 95 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 TRGV1A0A0A0MS02 117 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 FAM236DA0A1B0GTK5 79 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 KNCNA6PVL3 124 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 IGKV2D-28P01615 120 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 FAM236CP0DP71 79 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 HTN1P15515 57 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 CCL18P55774 89 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 Q8IZM0 81 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 C6orf223Q8N319 242 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 C3orf56Q8N813 242 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 DYNLRB2Q8TF09 96 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 C4orf3Q8WVX3 66 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 CCL19Q99731 98 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 C14orf132Q9NPU4 83 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 LRBAP50851 2863 aa1.68□□□□□ -2.14
VPS41-206ENST00000418457 NF1P21359 2839 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 MYO18BQ8IUG5 2567 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 PRRC2CQ9Y520 2896 aaKnown RBP1.67□□□□□ -2.14
VPS41-206ENST00000418457 SMIM26A0A096LP01 95 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 TRBV6-8A0A0A6YYG3 113 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 IGHV3OR16-9A0A0B4J2B5 98 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 IGKV3D-7A0A0C4DH55 119 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 KRTAP4-16G5E9R7 235 aaPredicted RBP1.67□□□□□ -2.14
VPS41-206ENST00000418457 NCR3O14931 201 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 RTL8CO15255 209 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 ERC2-IT1O76042 136 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 PRB2P02812 416 aaPredicted RBP1.67□□□□□ -2.14
VPS41-206ENST00000418457 CHTF8P0CG12 524 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 XCL1P47992 114 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 KLKP1Q107X0 134 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 SS18Q15532 418 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 Q5XG85 94 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 Q8N814 137 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 TOMM7Q9P0U1 55 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 XCL2Q9UBD3 114 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 PRO0628Q9UI54 55 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 KLK12Q9UKR0 248 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 ABCA2Q9BZC7 2435 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 FLNCQ14315 2725 aa1.67□□□□□ -2.14
VPS41-206ENST00000418457 ADGRG4Q8IZF6 3080 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 MED13LQ71F56 2210 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 A0A087WVE0 104 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 LINC00959A0A1B0GUT2 108 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 J3QKU1 62 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 RBM3P98179 157 aaKnown RBP1.66□□□□□ -2.14
VPS41-206ENST00000418457 CD164Q04900 197 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 DEFB114Q30KQ6 69 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 DEFB112Q30KQ8 113 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 ENHOQ6UWT2 76 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 FAM19A1Q7Z5A9 133 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 C1orf158Q8N1D5 194 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 C20orf197Q8N268 126 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 DSCR8Q96T75 97 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 CELSR2Q9HCU4 2923 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 UNC79Q9P2D8 2635 aa1.66□□□□□ -2.14
VPS41-206ENST00000418457 PDZD2O15018 2839 aa1.65□□□□□ -2.14
VPS41-206ENST00000418457 ANKRD17O75179 2603 aaKnown RBP1.65□□□□□ -2.15
VPS41-206ENST00000418457 TRAV23DV6A0A075B6W5 121 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 TRBV7-6A0A0J9YX20 115 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms