RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Tmem89Q9DA04 169 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Igkv8-24A0A140T8P5 121 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 MsmbO08540 113 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Rpl36aP83882 106 aaKnown RBP9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 AdmP97297 184 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm7489Q3UT34 171 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Olfr745Q7TRL9 328 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Srsf7Q8BL97 267 aaKnown RBP9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ssbp1Q9CYR0 152 aaKnown RBP9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Plpp2Q9DAX2 276 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Foxf2O54743 446 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Sec11aQ9R0P6 179 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Urb1Q571H0 2274 aaKnown RBP9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Igkv4-57-1A0A075B5M4 119 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 CfdP03953 259 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trdv4Q5R1A3 115 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trav7d-3Q5R1I1 112 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Zdbf2Q5SS00 2493 aaKnown RBP9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm29423A0A087WRM1 55 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm26727M0QWT1 121 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pex7P97865 318 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm10767Q3TQP0 103 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h1tQ07133 208 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 MycbQ6P8Z1 170 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Olfr1373Q7TQT6 311 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Prr3Q811B5 190 aaKnown RBP9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist3h2bbQ8CGP0 126 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist3h2baQ9D2U9 126 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Prss22Q9ER10 306 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Cd5lQ9QWK4 352 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Fbln5Q9WVH9 448 aa9.67□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Rnf217D3YYI7 515 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tmem86bQ497J1 226 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 OtorQ9JIE3 128 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ighv5-12-4A0A0A6YWG4 117 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Saa4P31532 130 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Cdcp2Q8BQH6 427 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ube2e2Q91W82 201 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ndufa11Q9D8B4 141 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Sipa1l3G3X9J0 1776 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm7075D3Z497 112 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 P01812 117 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Sod1P08228 154 aaKnown RBP9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Plac1Q9JI83 173 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pcm1Q9R0L6 2025 aa9.66□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ighv1-31A0A0A6YWK5 117 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm2564F6Z9S8 108 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ccl19O70460 108 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 CntfrO88507 372 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Cd69P37217 199 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tm2d3Q8BJ83 261 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Dock6Q8VDR9 2080 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Col4a3Q9QZS0 1669 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Carhsp1Q9CR86 148 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Mrpl32Q9DCI9 187 aaKnown RBP9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Igkv4-80A0A075B5L7 116 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tcrg-C1A0A075B5Z0 172 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tcrg-C3L7N479 172 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pax9P47242 342 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Dmrtc2Q8CGW9 370 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hils1Q9QYL0 170 aa9.65□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ifi27l2aQ8R412 90 aa9.65□□□□□ -0.87
Scn8a-208ENSMUST00000200963 SostQ99P68 211 aa9.65□□□□□ -0.87
Scn8a-208ENSMUST00000200963 B1ARW8 110 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav3-1Q5R1I8 114 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Olfr211Q8VGH2 309 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Pip4p2Q9CZX7 257 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm10775Q3V290 127 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm26938S4R185 226 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav9-1A0A075B601 112 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 1500009C09RikD3YYW9 81 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Foxh1O88621 401 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 P01726 129 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 BmperQ8CJ69 685 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 P01811 117 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Mrps21P58059 87 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm4763Q8CFJ5 196 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Pth2Q91W27 100 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Svs5P30933 122 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Pxt1Q8K459 51 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Olfr984Q8VFN1 314 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Mgst3Q9CPU4 153 aa9.64□□□□□ -0.87
Scn8a-208ENSMUST00000200963 A0A1Y7VLU2 103 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Tmem141A2AJB2 108 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm7102J3QQ10 178 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 IappP12968 93 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Gm5105Q8C6Y9 112 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv14-126A0A075B5K0 117 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Ighv8-6A0A0A6YXA3 118 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Trav2Q5R1I9 109 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 ArtnQ9Z0L2 224 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv4-53A0A0G2JFC6 119 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 4931422A03RikA2BHN9 113 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Supt4h1aP63271 117 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Igkv4-68A0A0B4J1I7 117 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Lamtor3O88653 124 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 P01655 112 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Iglc2P01844 104 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Vmo1Q5SXG7 201 aa9.63□□□□□ -0.87
Scn8a-208ENSMUST00000200963 Mrpl53Q9D1H8 118 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 219.3 ms