Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm25239-201ENSMUST00000174915 86 ntBASIC36.57■■■■□ 3.45
Urb1Q571H0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Urb1Q571H0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Urb1Q571H0 Gm24109-201ENSMUST00000175489 103 ntBASIC31.95■■■□□ 2.71
Urb1Q571H0 Gm15042-201ENSMUST00000120212 883 ntBASIC31.39■■■□□ 2.62
Urb1Q571H0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Urb1Q571H0 Gm15045-201ENSMUST00000117359 883 ntBASIC30.8■■■□□ 2.52
Urb1Q571H0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Urb1Q571H0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Urb1Q571H0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Urb1Q571H0 Gm23366-201ENSMUST00000175022 89 ntBASIC30.34■■■□□ 2.45
Urb1Q571H0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.99■■■□□ 2.39
Urb1Q571H0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.65■■■□□ 2.34
Urb1Q571H0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.6■■■□□ 2.33
Urb1Q571H0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Urb1Q571H0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Urb1Q571H0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Urb1Q571H0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Urb1Q571H0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Urb1Q571H0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Urb1Q571H0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.03■■■□□ 2.24
Urb1Q571H0 Gm25238-201ENSMUST00000174914 89 ntBASIC29.01■■■□□ 2.23
Urb1Q571H0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Urb1Q571H0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Urb1Q571H0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Urb1Q571H0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Urb1Q571H0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Urb1Q571H0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Urb1Q571H0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.27■■■□□ 2.12
Urb1Q571H0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Urb1Q571H0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Urb1Q571H0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Urb1Q571H0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Urb1Q571H0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
Urb1Q571H0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.99■■■□□ 2.07
Urb1Q571H0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Urb1Q571H0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.88■■■□□ 2.05
Urb1Q571H0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.87■■■□□ 2.05
Urb1Q571H0 Gm25262-201ENSMUST00000174934 133 ntBASIC27.87■■■□□ 2.05
Urb1Q571H0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Urb1Q571H0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.69■■■□□ 2.02
Urb1Q571H0 Gm27325-201ENSMUST00000175467 74 ntBASIC27.58■■■□□ 2.01
Urb1Q571H0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Urb1Q571H0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Urb1Q571H0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.52■■■□□ 2
Urb1Q571H0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.51■■□□□ 1.99
Urb1Q571H0 Gm26115-201ENSMUST00000175605 87 ntBASIC27.47■■□□□ 1.99
Urb1Q571H0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.44■■□□□ 1.98
Urb1Q571H0 Gm8109-201ENSMUST00000194076 746 ntBASIC27.41■■□□□ 1.98
Urb1Q571H0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Urb1Q571H0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Urb1Q571H0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Urb1Q571H0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.3■■□□□ 1.96
Urb1Q571H0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Urb1Q571H0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Urb1Q571H0 Rab21-202ENSMUST00000218831 843 ntBASIC27.23■■□□□ 1.95
Urb1Q571H0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Urb1Q571H0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.13■■□□□ 1.93
Urb1Q571H0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Urb1Q571H0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Urb1Q571H0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Urb1Q571H0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.98■■□□□ 1.91
Urb1Q571H0 Psd-208ENSMUST00000224556 2034 ntBASIC26.98■■□□□ 1.91
Urb1Q571H0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Urb1Q571H0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.9■■□□□ 1.9
Urb1Q571H0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.88■■□□□ 1.89
Urb1Q571H0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Urb1Q571H0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.76■■□□□ 1.87
Urb1Q571H0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.67■■□□□ 1.86
Urb1Q571H0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Urb1Q571H0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Urb1Q571H0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Urb1Q571H0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Urb1Q571H0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.52■■□□□ 1.84
Urb1Q571H0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Urb1Q571H0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Urb1Q571H0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Urb1Q571H0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
Urb1Q571H0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.45■■□□□ 1.82
Urb1Q571H0 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.43■■□□□ 1.82
Urb1Q571H0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Urb1Q571H0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Urb1Q571H0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Urb1Q571H0 Gm24804-201ENSMUST00000174982 85 ntBASIC26.27■■□□□ 1.8
Urb1Q571H0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Urb1Q571H0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Urb1Q571H0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.17■■□□□ 1.78
Urb1Q571H0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Urb1Q571H0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.15■■□□□ 1.78
Urb1Q571H0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Urb1Q571H0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.14■■□□□ 1.77
Urb1Q571H0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Urb1Q571H0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Urb1Q571H0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.13■■□□□ 1.77
Urb1Q571H0 Gm27322-201ENSMUST00000184007 104 ntBASIC26.11■■□□□ 1.77
Urb1Q571H0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Urb1Q571H0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.07■■□□□ 1.76
Urb1Q571H0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Urb1Q571H0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Urb1Q571H0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms