RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 C6orf201Q7Z4U5 140 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 MUSTN1Q8IVN3 82 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 TMEM263Q8WUH6 116 aaKnown RBP0.52□□□□□ -2.33
RNF4-219ENST00000513450 SMIM4Q8WVI0 70 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 SMCO4Q9NRQ5 59 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 KMT2BQ9UMN6 2715 aaPredicted RBP0.52□□□□□ -2.33
RNF4-219ENST00000513450 IQSEC2Q5JU85 1478 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 C1orf167Q5SNV9 1468 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 RAPGEF6Q8TEU7 1601 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 SHPRHQ149N8 1683 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 CRYBG1Q9Y4K1 1723 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 LTN1O94822 1766 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 ARFGEF2Q9Y6D5 1785 aa0.52□□□□□ -2.33
RNF4-219ENST00000513450 LINC00959A0A1B0GUT2 108 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 SLIT1O75093 1534 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 ANKRD17O75179 2603 aaKnown RBP0.51□□□□□ -2.33
RNF4-219ENST00000513450 LRP6O75581 1613 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 ACYP1P07311 99 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 RGPD1P0DJD0 1748 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 GCHFRP30047 84 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 S100A3P33764 101 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 SMIM11AP58511 58 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 HAMPP81172 84 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 PRB3Q04118 309 aaPredicted RBP0.51□□□□□ -2.33
RNF4-219ENST00000513450 TARBP1Q13395 1621 aaKnown RBP0.51□□□□□ -2.33
RNF4-219ENST00000513450 COX17Q14061 63 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 NCOA2Q15596 1464 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 HMGN3Q15651 99 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 ANKARQ7Z5J8 1434 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 NAV3Q8IVL0 2385 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 MADDQ8WXG6 1647 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 CFAP74Q9C0B2 1584 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 UGGT2Q9NYU1 1516 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 UBE2D4Q9Y2X8 147 aa0.51□□□□□ -2.33
RNF4-219ENST00000513450 AHCTF1Q8WYP5 2266 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 LRRC37A2A6NM11 1700 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 ZC3H13Q5T200 1668 aaKnown RBP0.5□□□□□ -2.33
RNF4-219ENST00000513450 CEP170BQ9Y4F5 1589 aaPredicted RBP0.5□□□□□ -2.33
RNF4-219ENST00000513450 CUX1P39880 1505 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 KCPQ6ZWJ8 1503 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 ABCC2Q92887 1545 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 CLIP1P30622 1438 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 UNC79Q9P2D8 2635 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 A0A0D9SG42 100 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 TRBV7-4A0A0J9YYF1 115 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 CEBPZOSA8MTT3 80 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 H0Y9P7 68 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 PLGLAQ15195 96 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 HEPN1Q6WQI6 88 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 RGPD8O14715 1765 aaPredicted RBP0.5□□□□□ -2.33
RNF4-219ENST00000513450 RGPD5Q99666 1765 aa0.5□□□□□ -2.33
RNF4-219ENST00000513450 C5P01031 1676 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 GOLGA4Q13439 2230 aaKnown RBP0.49□□□□□ -2.33
RNF4-219ENST00000513450 CCDC141Q6ZP82 1450 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 SMIM31A0A1B0GVY4 71 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 SMIM13P0DJ93 91 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 SSBP3-AS1Q7Z2R9 100 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 ZNF462Q96JM2 2506 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 ASH1LQ9NR48 2969 aaKnown RBP0.49□□□□□ -2.33
RNF4-219ENST00000513450 ITSN1Q15811 1721 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 USP32Q8NFA0 1604 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 PTPN23Q9H3S7 1636 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 SAMD9Q5K651 1589 aa0.49□□□□□ -2.33
RNF4-219ENST00000513450 ABCC1P33527 1531 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 ATP7BP35670 1465 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 CD163L1Q9NR16 1453 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 URB1O60287 2271 aaKnown RBP0.48□□□□□ -2.33
RNF4-219ENST00000513450 XRN1Q8IZH2 1706 aaKnown RBP0.48□□□□□ -2.33
RNF4-219ENST00000513450 HMGA1P17096 107 aaKnown RBP0.48□□□□□ -2.33
RNF4-219ENST00000513450 GNGT1P63211 74 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 CRIPTQ9P021 101 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 ALKQ9UM73 1620 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 ERICH3Q5RHP9 1530 aa0.48□□□□□ -2.33
RNF4-219ENST00000513450 PKD1L3Q7Z443 1732 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 PLCE1Q9P212 2302 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 TRAV21A0A0B4J279 112 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 TRBV6-1A0A0K0K1D8 114 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 A0A1B0GU69 56 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 I3L2K1 104 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 PIN1P1O15428 100 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 IFI6P09912 130 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 UBE2DNLQ8IWF7 75 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 FAM103A1Q9BTL3 118 aaKnown RBP0.47□□□□□ -2.33
RNF4-219ENST00000513450 HILPDAQ9Y5L2 63 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 ERCC6L2Q5T890 1561 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 MAGI3Q5TCQ9 1506 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 TULP4Q9NRJ4 1543 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 FAM208BQ5VWN6 2430 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 SCN11AQ9UI33 1791 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 LRRC9Q6ZRR7 1453 aa0.47□□□□□ -2.33
RNF4-219ENST00000513450 PIK3C2BO00750 1634 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 UBR3Q6ZT12 1888 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 ANK2Q01484 3957 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 A0A1B0GUT8 65 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 UMAD1C9J7I0 102 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 DEFB112Q30KQ8 113 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 SPINK9Q5DT21 86 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 KRTAP5-10Q6L8G5 202 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 DUOX2Q9NRD8 1548 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms