RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
RNF4-219ENST00000513450 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
RNF4-219ENST00000513450 SENP3Q9H4L4 574 aaPredicted RBP10.21□□□□□ -0.77
RNF4-219ENST00000513450 PHF23Q9BUL5 403 aaPredicted RBP10.03□□□□□ -0.8
RNF4-219ENST00000513450 FOXD1Q16676 465 aa9.55□□□□□ -0.88
RNF4-219ENST00000513450 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
RNF4-219ENST00000513450 MSH5O43196 834 aa9.08□□□□□ -0.96
RNF4-219ENST00000513450 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
RNF4-219ENST00000513450 PIAS4Q8N2W9 510 aaPredicted RBP8.89□□□□□ -0.99
RNF4-219ENST00000513450 ADRA2BP18089 450 aa8.65□□□□□ -1.02
RNF4-219ENST00000513450 PPP6R1Q9UPN7 881 aa8.65□□□□□ -1.02
RNF4-219ENST00000513450 CACNB1Q02641 598 aaPredicted RBP8.05□□□□□ -1.12
RNF4-219ENST00000513450 MAPK8IP2Q13387 824 aaPredicted RBP8.04□□□□□ -1.12
RNF4-219ENST00000513450 DMRT2Q9Y5R5 561 aa8.02□□□□□ -1.13
RNF4-219ENST00000513450 PPP4R3CPQ6ZMV5 832 aa8□□□□□ -1.13
RNF4-219ENST00000513450 KCNA4P22459 653 aa7.95□□□□□ -1.14
RNF4-219ENST00000513450 SCAF1Q9H7N4 1312 aaKnown RBP7.93□□□□□ -1.14
RNF4-219ENST00000513450 NCBP3Q53F19 620 aaKnown RBP7.87□□□□□ -1.15
RNF4-219ENST00000513450 DCAF8L1A6NGE4 600 aa7.86□□□□□ -1.15
RNF4-219ENST00000513450 CNKSR2Q8WXI2 1034 aa7.77□□□□□ -1.17
RNF4-219ENST00000513450 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.18
RNF4-219ENST00000513450 RNF39Q9H2S5 420 aa7.68□□□□□ -1.18
RNF4-219ENST00000513450 SLC4A1APQ9BWU0 796 aaKnown RBP7.62□□□□□ -1.19
RNF4-219ENST00000513450 RNF216Q9NWF9 866 aaPredicted RBP7.58□□□□□ -1.2
RNF4-219ENST00000513450 HOXD11P31277 338 aaPredicted RBP7.57□□□□□ -1.2
RNF4-219ENST00000513450 C1QBPQ07021 282 aaKnown RBP7.57□□□□□ -1.2
RNF4-219ENST00000513450 EHMT2Q96KQ7 1210 aa7.53□□□□□ -1.2
RNF4-219ENST00000513450 DNAJC5BQ9UF47 199 aa7.53□□□□□ -1.2
RNF4-219ENST00000513450 CSRNP3Q8WYN3 585 aa7.41□□□□□ -1.22
RNF4-219ENST00000513450 POTEHQ6S545 545 aa7.34□□□□□ -1.23
RNF4-219ENST00000513450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.244e-7■■□□□ 12.7
RNF4-219ENST00000513450 ZBTB22O15209 634 aa7.31□□□□□ -1.24
RNF4-219ENST00000513450 FOXD4L1Q9NU39 408 aa7.31□□□□□ -1.24
RNF4-219ENST00000513450 SLC4A2P04920 1241 aa7.24□□□□□ -1.25
RNF4-219ENST00000513450 CAPN15O75808 1086 aa7.15□□□□□ -1.26
RNF4-219ENST00000513450 MYCNP04198 464 aaPredicted RBP7.14□□□□□ -1.27
RNF4-219ENST00000513450 DSG3P32926 999 aa7.1□□□□□ -1.27
RNF4-219ENST00000513450 SPINK5Q9NQ38 1064 aaPredicted RBP7.09□□□□□ -1.27
RNF4-219ENST00000513450 ATXN8OSP0DMR3 200 aa7.07□□□□□ -1.28
RNF4-219ENST00000513450 U3KPZ7 1027 aaPredicted RBP7.07□□□□□ -1.28
RNF4-219ENST00000513450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.05□□□□□ -1.28
RNF4-219ENST00000513450 HNRNPUL2Q1KMD3 747 aaKnown RBP7.05□□□□□ -1.28
RNF4-219ENST00000513450 SAMD1Q6SPF0 538 aaPredicted RBP7.01□□□□□ -1.29
RNF4-219ENST00000513450 TRHP20396 242 aaPredicted RBP6.96□□□□□ -1.3
RNF4-219ENST00000513450 ABCB7O75027 752 aa6.95□□□□□ -1.3
RNF4-219ENST00000513450 APLP2Q06481 763 aa6.94□□□□□ -1.3
RNF4-219ENST00000513450 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
RNF4-219ENST00000513450 ZNF219Q9P2Y4 722 aaPredicted RBP6.88□□□□□ -1.31
RNF4-219ENST00000513450 RBM42Q9BTD8 480 aaKnown RBP6.82□□□□□ -1.32
RNF4-219ENST00000513450 CHRDL2Q6WN34 429 aa6.79□□□□□ -1.32
RNF4-219ENST00000513450 SP7Q8TDD2 431 aaPredicted RBP6.72□□□□□ -1.33
RNF4-219ENST00000513450 POLA2Q14181 598 aa6.69□□□□□ -1.34
RNF4-219ENST00000513450 FKBP8Q14318 412 aa6.68□□□□□ -1.34
RNF4-219ENST00000513450 FBLN2P98095 1184 aa6.64□□□□□ -1.35
RNF4-219ENST00000513450 ZBTB12Q9Y330 459 aaPredicted RBP6.63□□□□□ -1.35
RNF4-219ENST00000513450 MKRN4PQ13434 485 aaPredicted RBP6.61□□□□□ -1.35
RNF4-219ENST00000513450 HAX1O00165 279 aa6.58□□□□□ -1.36
RNF4-219ENST00000513450 AKT1S1Q96B36 256 aa6.57□□□□□ -1.36
RNF4-219ENST00000513450 SPDYE4A6NLX3 237 aa6.56□□□□□ -1.36
RNF4-219ENST00000513450 PIP4P2Q8N4L2 257 aa6.55□□□□□ -1.36
RNF4-219ENST00000513450 REM2Q8IYK8 340 aaPredicted RBP6.51□□□□□ -1.37
RNF4-219ENST00000513450 PROM2Q8N271 834 aa6.49□□□□□ -1.37
RNF4-219ENST00000513450 PITPNM1O00562 1244 aa6.46□□□□□ -1.38
RNF4-219ENST00000513450 OSCARQ8IYS5 282 aa6.46□□□□□ -1.38
RNF4-219ENST00000513450 FBXO3Q9UK99 471 aa6.46□□□□□ -1.38
RNF4-219ENST00000513450 SPDYE2BA6NHP3 402 aa6.45□□□□□ -1.38
RNF4-219ENST00000513450 SPDYE6P0CI01 402 aa6.45□□□□□ -1.38
RNF4-219ENST00000513450 SPDYE2Q495Y8 402 aa6.45□□□□□ -1.38
RNF4-219ENST00000513450 FXR2P51116 673 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNF4-219ENST00000513450 ZNF692Q9BU19 519 aaPredicted RBP6.43□□□□□ -1.38
RNF4-219ENST00000513450 EVX2Q03828 476 aa6.4□□□□□ -1.38
RNF4-219ENST00000513450 SSUH2Q9Y2M2 353 aa6.4□□□□□ -1.38
RNF4-219ENST00000513450 AMER1Q5JTC6 1135 aaPredicted RBP6.38□□□□□ -1.39
RNF4-219ENST00000513450 PABPN1Q86U42 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNF4-219ENST00000513450 VASPP50552 380 aaPredicted RBP6.33□□□□□ -1.4
RNF4-219ENST00000513450 PRKAR2AP13861 404 aaKnown RBP6.32□□□□□ -1.4
RNF4-219ENST00000513450 STAG3Q9UJ98 1225 aa6.32□□□□□ -1.4
RNF4-219ENST00000513450 LHX8Q68G74 356 aa6.31□□□□□ -1.4
RNF4-219ENST00000513450 RTN4Q9NQC3 1192 aaKnown RBP6.31□□□□□ -1.4
RNF4-219ENST00000513450 CLEC11AQ9Y240 323 aa6.31□□□□□ -1.4
RNF4-219ENST00000513450 GABBR2O75899 941 aa6.27□□□□□ -1.41
RNF4-219ENST00000513450 PLSCR2Q9NRY7 297 aa6.27□□□□□ -1.41
RNF4-219ENST00000513450 IFNLR1Q8IU57 520 aaPredicted RBP6.25□□□□□ -1.41
RNF4-219ENST00000513450 C19orf67A6NJJ6 358 aa6.24□□□□□ -1.41
RNF4-219ENST00000513450 SPDYE1Q8NFV5 336 aaPredicted RBP6.24□□□□□ -1.41
RNF4-219ENST00000513450 PLCD3Q8N3E9 789 aa6.21□□□□□ -1.42
RNF4-219ENST00000513450 MIER1Q8N108 512 aa6.2□□□□□ -1.42
RNF4-219ENST00000513450 PLEKHG5O94827 1062 aa6.19□□□□□ -1.42
RNF4-219ENST00000513450 CHADLQ6NUI6 762 aa6.19□□□□□ -1.42
RNF4-219ENST00000513450 KLHL34Q8N239 644 aa6.18□□□□□ -1.42
RNF4-219ENST00000513450 SPOCK2Q92563 424 aa6.17□□□□□ -1.42
RNF4-219ENST00000513450 ZBTB47Q9UFB7 747 aaPredicted RBP6.17□□□□□ -1.42
RNF4-219ENST00000513450 PRR29P0C7W0 189 aa6.15□□□□□ -1.42
RNF4-219ENST00000513450 CD44P16070 742 aaKnown RBP6.1□□□□□ -1.43
RNF4-219ENST00000513450 POTEIP0CG38 1075 aa6.09□□□□□ -1.43
RNF4-219ENST00000513450 PKD2Q13563 968 aa6.09□□□□□ -1.43
RNF4-219ENST00000513450 DCBLD2Q96PD2 775 aa6.08□□□□□ -1.44
RNF4-219ENST00000513450 CREBZFQ9NS37 354 aa6.08□□□□□ -1.44
RNF4-219ENST00000513450 MNX1P50219 401 aaPredicted RBP6.04□□□□□ -1.44
RNF4-219ENST00000513450 ECM2O94769 699 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms