RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.73
PMPCB-201ENST00000249269 IGHV3-38A0A0C4DH36 116 aa10.46□□□□□ -0.74
PMPCB-201ENST00000249269 A8MU10 97 aa10.46□□□□□ -0.74
PMPCB-201ENST00000249269 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.74
PMPCB-201ENST00000249269 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.74
PMPCB-201ENST00000249269 TRAV7A0A075B6U4 112 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 DYNLRB2Q8TF09 96 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 PTPRQQ9UMZ3 2332 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 DEFB114Q30KQ6 69 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 Q6ZRP5 223 aa10.45□□□□□ -0.74
PMPCB-201ENST00000249269 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
PMPCB-201ENST00000249269 TACC2O95359 2948 aa10.44□□□□□ -0.74
PMPCB-201ENST00000249269 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
PMPCB-201ENST00000249269 RMI2Q96E14 147 aa10.43□□□□□ -0.74
PMPCB-201ENST00000249269 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
PMPCB-201ENST00000249269 GNLYP22749 145 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 NTM-AS1Q6ZSK4 140 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 DCHS1Q96JQ0 3298 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 DCHS2Q6V1P9 2916 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 TRBV6-4A0A1B0GX49 114 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 MIFP14174 115 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 SLURP1P55000 103 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
PMPCB-201ENST00000249269 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
PMPCB-201ENST00000249269 A0A096LNT2 108 aa10.41□□□□□ -0.74
PMPCB-201ENST00000249269 TLN1Q9Y490 2541 aaKnown RBP10.4□□□□□ -0.74
PMPCB-201ENST00000249269 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
PMPCB-201ENST00000249269 ZFHX3Q15911 3703 aa10.4□□□□□ -0.74
PMPCB-201ENST00000249269 TRGV1A0A0A0MS02 117 aa10.4□□□□□ -0.75
PMPCB-201ENST00000249269 LY6G6DO95868 133 aa10.4□□□□□ -0.75
PMPCB-201ENST00000249269 DOPEY2Q9Y3R5 2298 aa10.39□□□□□ -0.75
PMPCB-201ENST00000249269 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
PMPCB-201ENST00000249269 MIR7-3HGQ8N6C7 128 aa10.39□□□□□ -0.75
PMPCB-201ENST00000249269 C16orf74Q96GX8 76 aa10.39□□□□□ -0.75
PMPCB-201ENST00000249269 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 IGKV2-28A0A075B6P5 120 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 IGKV2D-28P01615 120 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 LRBAP50851 2863 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 ATMQ13315 3056 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
PMPCB-201ENST00000249269 SMIM11BQ8TCY0 68 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 SNURFQ9Y675 71 aa10.38□□□□□ -0.75
PMPCB-201ENST00000249269 PTPRZ1P23471 2315 aaPredicted RBP10.37□□□□□ -0.75
PMPCB-201ENST00000249269 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
PMPCB-201ENST00000249269 ASPMQ8IZT6 3477 aa10.36□□□□□ -0.75
PMPCB-201ENST00000249269 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
PMPCB-201ENST00000249269 ORMDL1Q9P0S3 153 aa10.35□□□□□ -0.75
PMPCB-201ENST00000249269 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
PMPCB-201ENST00000249269 HCG22E2RYF7 251 aa10.34□□□□□ -0.75
PMPCB-201ENST00000249269 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
PMPCB-201ENST00000249269 CCL18P55774 89 aa10.34□□□□□ -0.75
PMPCB-201ENST00000249269 LINC00158P58513 81 aa10.34□□□□□ -0.75
PMPCB-201ENST00000249269 MED13LQ71F56 2210 aa10.33□□□□□ -0.75
PMPCB-201ENST00000249269 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
PMPCB-201ENST00000249269 NOTCH2NLQ7Z3S9 236 aa10.33□□□□□ -0.76
PMPCB-201ENST00000249269 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
PMPCB-201ENST00000249269 H3BQ85 93 aa10.32□□□□□ -0.76
PMPCB-201ENST00000249269 Q6ZTI0 123 aa10.32□□□□□ -0.76
PMPCB-201ENST00000249269 TRAV23DV6A0A075B6W5 121 aa10.32□□□□□ -0.76
PMPCB-201ENST00000249269 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
PMPCB-201ENST00000249269 A0A087WYN8 130 aa10.31□□□□□ -0.76
PMPCB-201ENST00000249269 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
PMPCB-201ENST00000249269 COX17Q14061 63 aa10.3□□□□□ -0.76
PMPCB-201ENST00000249269 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
PMPCB-201ENST00000249269 GVINP1Q7Z2Y8 2422 aa10.3□□□□□ -0.76
PMPCB-201ENST00000249269 Q8IZM0 81 aa10.3□□□□□ -0.76
PMPCB-201ENST00000249269 SPTBN1Q01082 2364 aaKnown RBP10.29□□□□□ -0.76
PMPCB-201ENST00000249269 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
PMPCB-201ENST00000249269 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
PMPCB-201ENST00000249269 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
PMPCB-201ENST00000249269 LECT2O14960 151 aa10.28□□□□□ -0.76
PMPCB-201ENST00000249269 TTC28Q96AY4 2481 aa10.27□□□□□ -0.76
PMPCB-201ENST00000249269 hDV103S1A0JD37 113 aa10.27□□□□□ -0.77
PMPCB-201ENST00000249269 COL6A6A6NMZ7 2263 aa10.27□□□□□ -0.77
PMPCB-201ENST00000249269 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
PMPCB-201ENST00000249269 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
PMPCB-201ENST00000249269 Q5VV11 94 aa10.26□□□□□ -0.77
PMPCB-201ENST00000249269 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
PMPCB-201ENST00000249269 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
PMPCB-201ENST00000249269 TOMM7Q9P0U1 55 aa10.26□□□□□ -0.77
PMPCB-201ENST00000249269 RIF1Q5UIP0 2472 aaKnown RBP10.25□□□□□ -0.77
PMPCB-201ENST00000249269 ZFHX2Q9C0A1 2572 aaPredicted RBP10.25□□□□□ -0.77
PMPCB-201ENST00000249269 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
PMPCB-201ENST00000249269 Q6ZTC4 211 aa10.24□□□□□ -0.77
PMPCB-201ENST00000249269 CSMD1Q96PZ7 3565 aa10.24□□□□□ -0.77
PMPCB-201ENST00000249269 HIVEP3Q5T1R4 2406 aa10.23□□□□□ -0.77
PMPCB-201ENST00000249269 Q8N814 137 aa10.23□□□□□ -0.77
PMPCB-201ENST00000249269 RETNLBQ9BQ08 111 aa10.23□□□□□ -0.77
PMPCB-201ENST00000249269 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.22□□□□□ -0.774e-8■■■■■ 64.9
PMPCB-201ENST00000249269 IGHV4-28A0A0C4DH34 117 aa10.22□□□□□ -0.77
PMPCB-201ENST00000249269 PDE6GP18545 87 aa10.22□□□□□ -0.77
PMPCB-201ENST00000249269 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.77
PMPCB-201ENST00000249269 INAFM1C9JVW0 142 aa10.21□□□□□ -0.77
PMPCB-201ENST00000249269 GIG44P09565 113 aaPredicted RBP10.21□□□□□ -0.77
PMPCB-201ENST00000249269 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
PMPCB-201ENST00000249269 LAMA5O15230 3695 aa10.21□□□□□ -0.78
PMPCB-201ENST00000249269 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms