RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 ASIPP42127 132 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 PKIAP61925 76 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 VPS8Q8N3P4 1428 aa0.36□□□□□ -2.35
TARDBP-210ENST00000496840 ADGRL2O95490 1459 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 ABCC10Q5T3U5 1492 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 TOP2BQ02880 1626 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 TET3O43151 1660 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 C7orf77A4D0Y5 90 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 FAUP35544 74 aaKnown RBP0.35□□□□□ -2.35
TARDBP-210ENST00000496840 PMCHL1Q16048 86 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 PSMG4Q5JS54 123 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 Q8IZM0 81 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 SERP2Q8N6R1 65 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 LCN9Q8WX39 176 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 LINC01600Q96MT4 127 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 TRGV9Q99603 122 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 SNHG12Q9BXW3 62 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
TARDBP-210ENST00000496840 TEX14Q8IWB6 1497 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 FYCO1Q9BQS8 1478 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 MLH3Q9UHC1 1453 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 RAPGEF6Q8TEU7 1601 aa0.35□□□□□ -2.35
TARDBP-210ENST00000496840 CCNB3Q8WWL7 1395 aa0.34□□□□□ -2.35
TARDBP-210ENST00000496840 TRBV25-1A0A075B6N4 114 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 A0A087WVE0 104 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 H7BZZ5 65 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 I3L2K1 104 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 CFDP00746 253 aaPredicted RBP0.34□□□□□ -2.36
TARDBP-210ENST00000496840 UQCRHP07919 91 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 PIGYQ3MUY2 71 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 DIP2CQ9Y2E4 1556 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 MYO7AQ13402 2215 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 GAPVD1Q14C86 1478 aa0.34□□□□□ -2.36
TARDBP-210ENST00000496840 TTC28Q96AY4 2481 aa0.33□□□□□ -2.36
TARDBP-210ENST00000496840 PRDM15P57071 1507 aaPredicted RBP0.33□□□□□ -2.36
TARDBP-210ENST00000496840 LINC00846Q9NV44 126 aa0.33□□□□□ -2.36
TARDBP-210ENST00000496840 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
TARDBP-210ENST00000496840 TOPAZ1Q8N9V7 1692 aa0.33□□□□□ -2.36
TARDBP-210ENST00000496840 ARHGEF12Q9NZN5 1544 aa0.33□□□□□ -2.36
TARDBP-210ENST00000496840 KDM3BQ7LBC6 1761 aa0.32□□□□□ -2.36
TARDBP-210ENST00000496840 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
TARDBP-210ENST00000496840 LAMC1P11047 1609 aa0.32□□□□□ -2.36
TARDBP-210ENST00000496840 UQCRHLA0A096LP55 91 aa0.32□□□□□ -2.36
TARDBP-210ENST00000496840 SYS1-DBNDD2H3BUS1 97 aa0.32□□□□□ -2.36
TARDBP-210ENST00000496840 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
TARDBP-210ENST00000496840 SBF2Q86WG5 1849 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 C1orf167Q5SNV9 1468 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 MAGI1Q96QZ7 1491 aaPredicted RBP0.31□□□□□ -2.36
TARDBP-210ENST00000496840 TRBV7-4A0A0J9YYF1 115 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 WFDC2Q14508 124 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 DEFB107AQ8IZN7 70 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 Q9H521 79 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 ASXL3Q9C0F0 2248 aa0.31□□□□□ -2.36
TARDBP-210ENST00000496840 WNK3Q9BYP7 1800 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 TRBV7-7A0A0K0K1E9 115 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 LINC00959A0A1B0GUT2 108 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 H3BQF6 201 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 SCN7AQ01118 1682 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 CHD1O14646 1710 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 ABCA3Q99758 1704 aa0.3□□□□□ -2.36
TARDBP-210ENST00000496840 PLEKHH2Q8IVE3 1493 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 NLRP1Q9C000 1473 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 BTAF1O14981 1849 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 BDP1A6H8Y1 2624 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 BIVM-ERCC5R4GMW8 1640 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 ARMS2P0C7Q2 107 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 GNGT1P63211 74 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 ETDBQ3ZM63 59 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 ZNF720Q7Z2F6 126 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 U3KQA8 63 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 COL4A6Q14031 1691 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 RAPGEF2Q9Y4G8 1499 aa0.29□□□□□ -2.36
TARDBP-210ENST00000496840 A0A1B0GU69 56 aa0.28□□□□□ -2.36
TARDBP-210ENST00000496840 H0Y9P7 68 aa0.28□□□□□ -2.36
TARDBP-210ENST00000496840 GYPAP02724 150 aa0.28□□□□□ -2.36
TARDBP-210ENST00000496840 C6orf201Q7Z4U5 140 aa0.28□□□□□ -2.36
TARDBP-210ENST00000496840 PLXNB2O15031 1838 aa0.28□□□□□ -2.36
TARDBP-210ENST00000496840 NRXN1Q9ULB1 1477 aa0.28□□□□□ -2.37
TARDBP-210ENST00000496840 PAPPAQ13219 1627 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 TCHHQ07283 1943 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 F8WEM9 126 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 COX6B1P14854 86 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 DEFB109BQ30KR1 87 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 Q5VSD8 79 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 DEFB123Q8N688 67 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 PSENENQ9NZ42 101 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 V9GYS6 101 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
TARDBP-210ENST00000496840 ABCA12Q86UK0 2595 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
TARDBP-210ENST00000496840 FAM208BQ5VWN6 2430 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 D6R8Y8 96 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 LEPROTL1O95214 131 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 SPRR1AP35321 89 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 HMGN3Q15651 99 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 MUSTN1Q8IVN3 82 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 C20orf78Q9BR46 151 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 HIGD1BQ9P298 99 aa0.26□□□□□ -2.37
TARDBP-210ENST00000496840 TULP4Q9NRJ4 1543 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms