RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IBA57-AS1B1ANH7 110 aa5.99□□□□□ -1.45
SKA2-201ENST00000330137 H3BQ85 93 aa5.99□□□□□ -1.45
SKA2-201ENST00000330137 CFHR3Q02985 330 aa5.99□□□□□ -1.45
SKA2-201ENST00000330137 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
SKA2-201ENST00000330137 C11orf71Q6IPW1 123 aa5.99□□□□□ -1.45
SKA2-201ENST00000330137 UBR5O95071 2799 aaPredicted RBP5.99□□□□□ -1.45
SKA2-201ENST00000330137 IGLV1-40P01703 118 aa5.99□□□□□ -1.45
SKA2-201ENST00000330137 FLNCQ14315 2725 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 LECT2O14960 151 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 SS18Q15532 418 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 MIR7-3HGQ8N6C7 128 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 LAMTOR3Q9UHA4 124 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 ZFP36P26651 326 aaKnown RBP5.98□□□□□ -1.45
SKA2-201ENST00000330137 HOXD3P31249 432 aaPredicted RBP5.98□□□□□ -1.45
SKA2-201ENST00000330137 BLCAPP62952 87 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 LINC00482Q8N8I6 264 aa5.98□□□□□ -1.45
SKA2-201ENST00000330137 TRBV10-1A0A0K0K1A3 114 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 TMEM89A2RUT3 159 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 NCR3O14931 201 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 RPL35AP18077 110 aaKnown RBP5.97□□□□□ -1.45
SKA2-201ENST00000330137 FP248Q71RG6 208 aaPredicted RBP5.97□□□□□ -1.45
SKA2-201ENST00000330137 PDE6GP18545 87 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 CXCL6P80162 114 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 SPINK13Q1W4C9 94 aa5.97□□□□□ -1.45
SKA2-201ENST00000330137 LOC110117498A0A087WWA1 95 aa5.96□□□□□ -1.45
SKA2-201ENST00000330137 SEC61GP60059 68 aa5.96□□□□□ -1.45
SKA2-201ENST00000330137 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.45
SKA2-201ENST00000330137 ENHOQ6UWT2 76 aa5.96□□□□□ -1.45
SKA2-201ENST00000330137 COX7B2Q8TF08 81 aa5.96□□□□□ -1.45
SKA2-201ENST00000330137 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.45
SKA2-201ENST00000330137 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.45
SKA2-201ENST00000330137 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.46
SKA2-201ENST00000330137 HILS1P60008 231 aa5.96□□□□□ -1.46
SKA2-201ENST00000330137 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
SKA2-201ENST00000330137 DOPEY2Q9Y3R5 2298 aa5.96□□□□□ -1.46
SKA2-201ENST00000330137 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.46
SKA2-201ENST00000330137 K7EQD1 137 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 IGKV3-7A0A075B6H7 116 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 A0A0U1RRA0 63 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 HIVEP3Q5T1R4 2406 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 CCL18P55774 89 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 PROK1P58294 105 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 FAM19A1Q7Z5A9 133 aa5.95□□□□□ -1.46
SKA2-201ENST00000330137 LRRK2Q5S007 2527 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 TRBV7-6A0A0J9YX20 115 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 Q8N814 137 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 Q6ZSN1 163 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 C11orf44Q8N8P7 122 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 ABCA4P78363 2273 aa5.94□□□□□ -1.46
SKA2-201ENST00000330137 POLEQ07864 2286 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 ADORA2A-AS1P86434 159 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 WNK2Q9Y3S1 2297 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 USP9XQ93008 2570 aaPredicted RBP5.93□□□□□ -1.46
SKA2-201ENST00000330137 HECTD1Q9ULT8 2610 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 IGHV3-73A0A0B4J1V6 119 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 TNP2Q05952 138 aa5.93□□□□□ -1.46
SKA2-201ENST00000330137 IGHV3-11P01762 117 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 LINC00158P58513 81 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 PCNX1Q96RV3 2341 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 F8WEM9 126 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 LINC01560Q8TB33 94 aa5.92□□□□□ -1.46
SKA2-201ENST00000330137 SPTBN1Q01082 2364 aaKnown RBP5.91□□□□□ -1.46
SKA2-201ENST00000330137 IGHV3-38A0A0C4DH36 116 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 A6NDX4 124 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 Q6ZQT0 140 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 C1orf158Q8N1D5 194 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 RBM3P98179 157 aaKnown RBP5.91□□□□□ -1.46
SKA2-201ENST00000330137 Q96MF0 132 aa5.91□□□□□ -1.46
SKA2-201ENST00000330137 SPTAN1Q13813 2472 aaKnown RBP5.91□□□□□ -1.46
SKA2-201ENST00000330137 FLNBO75369 2602 aaKnown RBP5.91□□□□□ -1.46
SKA2-201ENST00000330137 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
SKA2-201ENST00000330137 LY6HO94772 140 aa5.9□□□□□ -1.46
SKA2-201ENST00000330137 IGKV3-20P01619 116 aa5.9□□□□□ -1.46
SKA2-201ENST00000330137 LINC01547P58512 204 aaPredicted RBP5.9□□□□□ -1.46
SKA2-201ENST00000330137 CDSNQ15517 529 aa5.9□□□□□ -1.46
SKA2-201ENST00000330137 C6orf223Q8N319 242 aa5.9□□□□□ -1.46
SKA2-201ENST00000330137 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.47
SKA2-201ENST00000330137 AVPP01185 164 aa5.9□□□□□ -1.47
SKA2-201ENST00000330137 MIFP14174 115 aa5.9□□□□□ -1.47
SKA2-201ENST00000330137 LMO4P61968 165 aa5.9□□□□□ -1.47
SKA2-201ENST00000330137 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
SKA2-201ENST00000330137 USP9YO00507 2555 aaPredicted RBP5.9□□□□□ -1.47
SKA2-201ENST00000330137 PTPN13Q12923 2485 aa5.9□□□□□ -1.47
SKA2-201ENST00000330137 PAX4O43316 350 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 Q9UF83 564 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 ASH1LQ9NR48 2969 aaKnown RBP5.89□□□□□ -1.47
SKA2-201ENST00000330137 A0A087WZ39 114 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 DYNLRB2Q8TF09 96 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 C19orf84I3L1E1 186 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 UBE2L6O14933 153 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 WFDC9Q8NEX5 89 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
SKA2-201ENST00000330137 DOPEY1Q5JWR5 2465 aa5.88□□□□□ -1.47
SKA2-201ENST00000330137 PKDREJQ9NTG1 2253 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms