RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C LAM5P43560 674 aa3.3□□□□□ -1.88
SSN8YNL025C BUD27P43573 796 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SSN8YNL025C POL31P46957 487 aa3.3□□□□□ -1.88
SSN8YNL025C YGR283CP53336 341 aaPredicted RBP3.3□□□□□ -1.88
SSN8YNL025C RPT6Q01939 405 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C RMT2Q03305 412 aa3.3□□□□□ -1.88
SSN8YNL025C PRP42Q03776 544 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C YHM2Q04013 314 aa3.3□□□□□ -1.88
SSN8YNL025C DLT1Q04216 342 aa3.3□□□□□ -1.88
SSN8YNL025C MGR3Q04472 501 aa3.3□□□□□ -1.88
SSN8YNL025C ECM38Q05902 660 aaPredicted RBP3.3□□□□□ -1.88
SSN8YNL025C CDC45Q08032 650 aa3.3□□□□□ -1.88
SSN8YNL025C CUE5Q08412 411 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C HFI1Q12060 488 aa3.3□□□□□ -1.88
SSN8YNL025C HUA2Q12134 243 aa3.3□□□□□ -1.88
SSN8YNL025C NBP2Q12163 236 aa3.3□□□□□ -1.88
SSN8YNL025C RUD3Q12234 484 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C SWM1Q12379 170 aa3.3□□□□□ -1.88
SSN8YNL025C SKS1Q12505 502 aa3.3□□□□□ -1.88
SSN8YNL025C PAR32Q12515 295 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C APM4Q99186 491 aa3.3□□□□□ -1.88
SSN8YNL025C YMR084WA2P2R3 262 aa3.29□□□□□ -1.88
SSN8YNL025C SNF1P06782 633 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C TUB3P09734 445 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C OM45P16547 393 aa3.29□□□□□ -1.88
SSN8YNL025C HNM1P19807 563 aa3.29□□□□□ -1.88
SSN8YNL025C UBC1P21734 215 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C PRP28P23394 588 aa3.29□□□□□ -1.88
SSN8YNL025C PRE8P23639 250 aa3.29□□□□□ -1.88
SSN8YNL025C PHO3P24031 467 aa3.29□□□□□ -1.88
SSN8YNL025C MGM1P32266 881 aa3.29□□□□□ -1.88
SSN8YNL025C SMI1P32566 505 aa3.29□□□□□ -1.88
SSN8YNL025C RIB7P33312 244 aa3.29□□□□□ -1.88
SSN8YNL025C YHL017WP38745 532 aa3.29□□□□□ -1.88
SSN8YNL025C VPS41P38959 992 aa3.29□□□□□ -1.88
SSN8YNL025C YIL108WP40483 696 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C MKT1P40850 830 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C YJL055WP47044 245 aa3.29□□□□□ -1.88
SSN8YNL025C BSC5P53755 489 aa3.29□□□□□ -1.88
SSN8YNL025C HDA1P53973 706 aa3.29□□□□□ -1.88
SSN8YNL025C CEG1Q01159 459 aaPredicted RBP3.29□□□□□ -1.88
SSN8YNL025C YKR011CQ02209 353 aa3.29□□□□□ -1.88
SSN8YNL025C RRN5Q02983 363 aa3.29□□□□□ -1.88
SSN8YNL025C TAP42Q04372 366 aa3.29□□□□□ -1.88
SSN8YNL025C ATG38Q05789 226 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C VID22Q05934 901 aa3.29□□□□□ -1.88
SSN8YNL025C DBP9Q06218 594 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C HBT1Q07653 1046 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C FRE5Q08908 694 aa3.29□□□□□ -1.88
SSN8YNL025C PDH1Q12428 516 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C RVB2Q12464 471 aaKnown RBP3.29□□□□□ -1.88
SSN8YNL025C SKM1Q12469 655 aa3.29□□□□□ -1.88
SSN8YNL025C RRP36Q12481 300 aaPredicted RBP3.29□□□□□ -1.88
SSN8YNL025C SEC39Q12745 709 aa3.29□□□□□ -1.88
SSN8YNL025C SEC53P07283 254 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C MER1P16523 270 aa3.28□□□□□ -1.88
SSN8YNL025C RFA1P22336 621 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C SGF29P25554 259 aa3.28□□□□□ -1.88
SSN8YNL025C ERG3P32353 365 aa3.28□□□□□ -1.88
SSN8YNL025C SMY1P32364 656 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C NIP1P32497 812 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C SAC6P32599 642 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C TFB1P32776 642 aa3.28□□□□□ -1.88
SSN8YNL025C EMC3P36039 253 aa3.28□□□□□ -1.88
SSN8YNL025C CUE2P36075 443 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C MIC60P36112 540 aa3.28□□□□□ -1.88
SSN8YNL025C RPC37P36121 282 aa3.28□□□□□ -1.88
SSN8YNL025C APE3P37302 537 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C HSM3P38348 480 aa3.28□□□□□ -1.88
SSN8YNL025C RFC1P38630 861 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C OTU2P38747 307 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C MTG2P38860 518 aa3.28□□□□□ -1.88
SSN8YNL025C ELO3P40319 345 aa3.28□□□□□ -1.88
SSN8YNL025C DPH1P40487 425 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C YIL092WP40497 633 aa3.28□□□□□ -1.88
SSN8YNL025C SDS3P40505 327 aa3.28□□□□□ -1.88
SSN8YNL025C NUP84P52891 726 aa3.28□□□□□ -1.88
SSN8YNL025C ART5P53244 586 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C YNR061CP53747 219 aa3.28□□□□□ -1.88
SSN8YNL025C MUK1Q02866 612 aa3.28□□□□□ -1.88
SSN8YNL025C YML119WQ03208 357 aa3.28□□□□□ -1.88
SSN8YNL025C MFB1Q04922 465 aa3.28□□□□□ -1.88
SSN8YNL025C ARP9Q05123 467 aa3.28□□□□□ -1.88
SSN8YNL025C YDR338CQ05497 695 aa3.28□□□□□ -1.88
SSN8YNL025C ADY4Q05955 493 aa3.28□□□□□ -1.88
SSN8YNL025C CSR1Q06705 408 aaKnown RBP3.28□□□□□ -1.88
SSN8YNL025C MET7Q08645 548 aa3.28□□□□□ -1.88
SSN8YNL025C NUR1Q12066 484 aa3.28□□□□□ -1.88
SSN8YNL025C NFI1Q12216 726 aa3.28□□□□□ -1.88
SSN8YNL025C NDJ1Q12366 352 aa3.28□□□□□ -1.88
SSN8YNL025C TRM13Q12383 476 aa3.28□□□□□ -1.88
SSN8YNL025C INO80P53115 1489 aa3.28□□□□□ -1.88
SSN8YNL025C MET17P06106 444 aa3.27□□□□□ -1.89
SSN8YNL025C RPB2P08518 1224 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C HMG1P12683 1054 aa3.27□□□□□ -1.89
SSN8YNL025C OLE1P21147 510 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C PWP1P21304 576 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C CLB4P24871 460 aa3.27□□□□□ -1.89
SSN8YNL025C LCB1P25045 558 aaKnown RBP3.27□□□□□ -1.89
SSN8YNL025C RRP43P25359 394 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms