RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	ALG7	P07286	448 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	SPO16	P17122	198 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	CNE1	P27825	502 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	CCL1	P37366	393 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YPT10	P38146	199 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	VPS4	P52917	437 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YRB30	P53107	440 aa	Predicted RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	EFR3	Q03653	782 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	FUM1	P08417	488 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	RPB2	P08518	1224 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	BET2	P20133	325 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	CDC5	P32562	705 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	SAC6	P32599	642 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	MAC1	P35192	417 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	MRPL36	P36531	177 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	RKM3	P38222	552 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YBR138C	P38277	524 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	PPE1	P38796	400 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	YNG2	P38806	282 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	UTP9	P38882	575 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	ARG2	P40360	574 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	FAF1	P40546	346 aa	Predicted RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	THI6	P41835	540 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	MPS3	P47069	682 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	MCM6	P53091	1017 aa	Known RBP	1.63	□□□□□ -2.15
SMC4	YLR086W	VPS64	Q03944	604 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	AIM39	Q08223	395 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	MED1	Q12321	566 aa		1.63	□□□□□ -2.15
SMC4	YLR086W	REV3	P14284	1504 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YMR084W	A2P2R3	262 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	DSS4	P32601	143 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	MRPL7	P36519	292 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	SFB3	P38810	929 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	UBP7	P40453	1071 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	PAN2	P53010	1115 aa	Predicted RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	ARA2	Q04212	335 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	VID22	Q05934	901 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	COG4	Q06096	861 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	TMA10	Q06177	86 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YLR040C	Q07988	224 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	ETT1	Q08421	412 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	YPL272C	Q08984	517 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	SEC12	P11655	471 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	APA1	P16550	321 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	RPT3	P33298	428 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	LOT5	P34234	306 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	BDH2	P39713	417 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YER010C	P40011	234 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	VID27	P40157	782 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	LAS21	P40367	830 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	IRC24	P40580	263 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	IML2	P47031	731 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	RFX1	P48743	811 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	PSP1	P50896	841 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	MOT3	P54785	490 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	SSL2	Q00578	843 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	CTF4	Q01454	927 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	UFO1	Q04511	668 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	MRI1	Q06489	411 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	YPL191C	Q08930	360 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	PUS9	Q12069	462 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	MLH3	Q12083	715 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	RVB2	Q12464	471 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	ECM3	Q99252	613 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	SSM4	P40318	1319 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	CDC31	P06704	161 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	SNF1	P06782	633 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	STE4	P18851	423 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	LRE1	P25579	583 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	HRR25	P29295	494 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	MCM10	P32354	571 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	PHO11	P35842	467 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	TDP1	P38319	544 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YHR033W	P38690	423 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	PHO12	P38693	467 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	VFA1	P40080	203 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YIL077C	P40508	320 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	AAD10	P47182	288 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	UPF3	P48412	387 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	MRK1	P50873	501 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	MEP3	P53390	489 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	SQS1	P53866	767 aa	Known RBP	1.62	□□□□□ -2.15
SMC4	YLR086W	YNL058C	P53947	316 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	GTR1	Q00582	310 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	ESC8	Q08119	714 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	CRT10	Q08226	957 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YOL073C	Q08232	322 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	TGS1	Q12052	315 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	NMD4	Q12129	218 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	RKI1	Q12189	258 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	SCM3	Q12334	223 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	YPK9	Q12697	1472 aa		1.62	□□□□□ -2.15
SMC4	YLR086W	TUP1	P16649	713 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	CAB2	P40506	365 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	SMK1	P41808	388 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	RGC1	Q06108	1083 aa	Known RBP	1.61	□□□□□ -2.15
SMC4	YLR086W	YDL073W	Q07454	984 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	IRC13	Q08630	104 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	NBP2	Q12163	236 aa		1.61	□□□□□ -2.15
SMC4	YLR086W	ACF2	Q12168	779 aa		1.61	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 63 ms