RNA–Protein interactions for RNA: YKR082W

NUP133, Transcript of Subunit of Nup84p subcomplex of nuclear pore complex (NPC), yeast

Gene NUP133, Length 3,474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP133	YKR082W	MED8	P38304	223 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	YAP3	P38749	330 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	EGD2	P38879	174 aa	Known RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	YER137C	P40083	148 aa	Known RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	EMP65	P40085	556 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	ULP2	P40537	1034 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	GLG2	P47011	380 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	ALB1	P47019	175 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NUP133	YKR082W	ARC35	P53731	342 aa	Known RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	FYV6	P53913	173 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	CLU1	Q03690	1277 aa	Known RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	GFD1	Q04839	188 aa	Known RBP	4.21	□□□□□ -1.74
NUP133	YKR082W	NDE2	Q07500	545 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	SMC5	Q08204	1093 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	HER1	Q12276	1246 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	ARP7	Q12406	477 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	ISA2	Q12425	185 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	SEC39	Q12745	709 aa		4.21	□□□□□ -1.74
NUP133	YKR082W	SNF1	P06782	633 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	MET3	P08536	511 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	TCP1	P12612	559 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	AFT1	P22149	690 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	GRR1	P24814	1151 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	CLB1	P24868	471 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	YPT52	P36018	234 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NUP133	YKR082W	ALG14	P38242	237 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	PRM9	P39551	298 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	YER156C	P40093	338 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	INP52	P50942	1183 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	EAF1	Q06337	982 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	SIL1	Q08199	421 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	DNL4	Q08387	944 aa	Predicted RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	YOL114C	Q12322	202 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	RAD50	P12753	1312 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	PRB1	P09232	635 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	TRK1	P12685	1235 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NUP133	YKR082W	DAL81	P21657	970 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	BUD31	P25337	157 aa	Predicted RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	EMC1	P25574	760 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	PCL2	P25693	308 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	NGG1	P32494	702 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	SMC1	P32908	1225 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	HEL1	P36113	551 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	APM3	P38153	483 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	DUN1	P39009	513 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	SSO2	P39926	295 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	EDC3	P39998	551 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	GZF3	P42944	551 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	MDV1	P47025	714 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	AIM14	P53109	570 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	DSE4	P53753	1117 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	BSC2	Q05611	235 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	YCG1	Q06680	1035 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	RTN2	Q12443	393 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	RAD3	P06839	778 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	RPC31	P17890	251 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	TEC1	P18412	486 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	ERG1	P32476	496 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	UGA2	P38067	497 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	MVP1	P40959	511 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	MRPS18	P42847	217 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	MET13	P53128	600 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	LCL3	P53153	274 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	PDR16	P53860	351 aa	Known RBP	4.2	□□□□□ -1.74
NUP133	YKR082W	ARO80	Q04052	950 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	RTT10	Q08924	1013 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	TSC13	Q99190	310 aa		4.2	□□□□□ -1.74
NUP133	YKR082W	SRD1	P09007	221 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	ISY1	P21374	235 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	ZIP1	P31111	875 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	LRG1	P35688	1017 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	ADE17	P38009	592 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	ADH5	P38113	351 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	MCM7	P38132	845 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	CCC2	P38995	1004 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	YFL052W	P43551	465 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	GNP1	P48813	663 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	HFM1	P51979	1187 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	MCM6	P53091	1017 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	SAM50	P53969	484 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	YPL109C	Q02981	657 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	HLR1	Q04429	423 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	MMR1	Q06324	491 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	SRO7	Q12038	1033 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	SPE3	Q12074	293 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	SWI1	P09547	1314 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	FUM1	P08417	488 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	PFK1	P16861	987 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	KAP104	P38217	918 aa	Known RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	SLI15	P38283	698 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	LIN1	P38852	340 aa	Predicted RBP	4.19	□□□□□ -1.74
NUP133	YKR082W	AXL2	P38928	823 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	ECM1	P39715	212 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	ATF1	P40353	525 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	STB4	P50104	949 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	SGF73	P53165	657 aa		4.19	□□□□□ -1.74
NUP133	YKR082W	SFB2	P53953	876 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms