RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	PFA3	P42836	336 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	BTN2	P53286	410 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	ASI2	P53895	289 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	YPL108W	Q02872	168 aa	Predicted RBP	4.71	□□□□□ -1.66
VMA22	YHR060W	GCN5	Q03330	439 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	ROT1	Q03691	256 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	MUS81	Q04149	632 aa	Predicted RBP	4.71	□□□□□ -1.66
VMA22	YHR060W	RCO1	Q04779	684 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	RXT3	Q07458	294 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	DIA2	Q08496	732 aa	Predicted RBP	4.71	□□□□□ -1.66
VMA22	YHR060W	RCN2	Q12044	265 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	NUS1	Q12063	375 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	COX17	Q12287	69 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	YBR126W-A	Q8TGU7	68 aa		4.71	□□□□□ -1.66
VMA22	YHR060W	ARG3	P05150	338 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	RPS9B	P05755	195 aa	Known RBP	4.7	□□□□□ -1.66
VMA22	YHR060W	PWP1	P21304	576 aa	Known RBP	4.7	□□□□□ -1.66
VMA22	YHR060W	ESL2	P36168	1195 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	NPR2	P39923	615 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	YJL068C	P40363	299 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	MND2	P40577	368 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	SKP2	P42843	763 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	SPT20	P50875	604 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	DUO1	P53168	247 aa	Known RBP	4.7	□□□□□ -1.66
VMA22	YHR060W	CIK1	Q01649	594 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	CLU1	Q03690	1277 aa	Known RBP	4.7	□□□□□ -1.66
VMA22	YHR060W	YMR155W	Q03795	547 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	ARP9	Q05123	467 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	ADY3	Q07732	790 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	GPB1	Q08886	897 aa		4.7	□□□□□ -1.66
VMA22	YHR060W	NOP58	Q12499	511 aa	Known RBP	4.7	□□□□□ -1.66
VMA22	YHR060W	YLR415C	O13578	112 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	PMS1	P14242	873 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	ADE2	P21264	571 aa	Known RBP	4.69	□□□□□ -1.66
VMA22	YHR060W	ARG1	P22768	420 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	LCB1	P25045	558 aa	Known RBP	4.69	□□□□□ -1.66
VMA22	YHR060W	PRE4	P30657	266 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	CTF13	P35203	478 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	SIC1	P38634	284 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	FLC2	P39719	783 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	SIP4	P46954	829 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	BIT61	P47041	543 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	ARE2	P53629	642 aa	Known RBP	4.69	□□□□□ -1.66
VMA22	YHR060W	ACS1	Q01574	713 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	RCR2	Q03446	210 aa	Known RBP	4.69	□□□□□ -1.66
VMA22	YHR060W	PLB2	Q03674	706 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	YDR132C	Q03900	495 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	ADY4	Q05955	493 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	GPR1	Q12361	961 aa		4.69	□□□□□ -1.66
VMA22	YHR060W	ERG27	Q12452	347 aa	Known RBP	4.69	□□□□□ -1.66
VMA22	YHR060W	YLR358C	O13565	187 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	CYB2	P00175	591 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	RPL19A	P0CX82	189 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	RPL19B	P0CX83	189 aa	Predicted RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	PET122	P10355	254 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	TPM1	P17536	199 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	ROX1	P25042	368 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	PEP3	P27801	918 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	ERG3	P32353	365 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	RMA1	P36001	430 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	LSM5	P40089	93 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	YIL166C	P40445	542 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	URM1	P40554	99 aa	Predicted RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	POL31	P46957	487 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	VPS4	P52917	437 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	COG1	P53079	417 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	OGG1	P53397	376 aa	Predicted RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	YNR061C	P53747	219 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	VPS75	P53853	264 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	RMT2	Q03305	412 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	HMO1	Q03973	246 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	DUS4	Q06063	367 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	ACK1	Q07622	623 aa	Predicted RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	CTI6	Q08923	506 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	LYS21	Q12122	440 aa	Known RBP	4.68	□□□□□ -1.66
VMA22	YHR060W	UPC2	Q12151	913 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	POM34	Q12445	299 aa		4.68	□□□□□ -1.66
VMA22	YHR060W	TUB2	P02557	457 aa	Known RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	MET17	P06106	444 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	PRP45	P28004	379 aa	Predicted RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	BRF1	P29056	596 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	MRP20	P32387	263 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	RPN2	P32565	945 aa	Known RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	MTC7	P32633	139 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	ECM32	P32644	1121 aa	Known RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	TOD6	P34219	525 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	THI80	P35202	319 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	CDS1	P38221	457 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	TDP1	P38319	544 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	SFB3	P38810	929 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	MET12	P46151	657 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	ASE1	P50275	885 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	GTF1	P53260	183 aa	Predicted RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	CSL4	P53859	292 aa	Predicted RBP	4.67	□□□□□ -1.66
VMA22	YHR060W	YSA1	Q01976	231 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	TRS31	Q03337	283 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	GAD1	Q04792	585 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	ASM4	Q05166	528 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	VPS36	Q06696	566 aa		4.67	□□□□□ -1.66
VMA22	YHR060W	TPO1	Q07824	586 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms