RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W VPS3P23643 1011 aa8.23□□□□□ -1.09
UFD1YGR048W CLB3P24870 427 aa8.23□□□□□ -1.09
UFD1YGR048W OCA4P25366 362 aa8.23□□□□□ -1.09
UFD1YGR048W EUG1P32474 517 aa8.23□□□□□ -1.09
UFD1YGR048W DOM34P33309 386 aa8.23□□□□□ -1.09
UFD1YGR048W LRG1P35688 1017 aa8.23□□□□□ -1.09
UFD1YGR048W TMN3P40071 706 aa8.23□□□□□ -1.09
UFD1YGR048W YER186CP40101 306 aa8.23□□□□□ -1.09
UFD1YGR048W EMP47P43555 445 aa8.23□□□□□ -1.09
UFD1YGR048W FMP32P43557 207 aa8.23□□□□□ -1.09
UFD1YGR048W MDE1P47095 244 aa8.23□□□□□ -1.09
UFD1YGR048W TAD1P53065 400 aa8.23□□□□□ -1.09
UFD1YGR048W ASI2P53895 289 aa8.23□□□□□ -1.09
UFD1YGR048W YNL058CP53947 316 aa8.23□□□□□ -1.09
UFD1YGR048W ZDS2P54786 942 aa8.23□□□□□ -1.09
UFD1YGR048W DAK1P54838 584 aaKnown RBP8.23□□□□□ -1.09
UFD1YGR048W COQ9Q05779 260 aa8.23□□□□□ -1.09
UFD1YGR048W YCS4Q06156 1176 aa8.23□□□□□ -1.09
UFD1YGR048W MED4Q12343 284 aa8.23□□□□□ -1.09
UFD1YGR048W NSI1Q12457 570 aa8.23□□□□□ -1.09
UFD1YGR048W ATG11Q12527 1178 aa8.23□□□□□ -1.09
UFD1YGR048W ICL1P28240 557 aaPredicted RBP8.22□□□□□ -1.09
UFD1YGR048W HEM3P28789 327 aa8.22□□□□□ -1.09
UFD1YGR048W MET1P36150 593 aa8.22□□□□□ -1.09
UFD1YGR048W RFS1P38234 210 aaKnown RBP8.22□□□□□ -1.09
UFD1YGR048W SDH8P38345 138 aa8.22□□□□□ -1.09
UFD1YGR048W TIF5P38431 405 aaKnown RBP8.22□□□□□ -1.09
UFD1YGR048W APE4P38821 490 aa8.22□□□□□ -1.09
UFD1YGR048W OAF1P39720 1047 aaPredicted RBP8.22□□□□□ -1.09
UFD1YGR048W BOL3P39724 118 aa8.22□□□□□ -1.09
UFD1YGR048W SSP120P39931 234 aaKnown RBP8.22□□□□□ -1.09
UFD1YGR048W MTG1Q03151 367 aaPredicted RBP8.22□□□□□ -1.09
UFD1YGR048W YDR476CQ03362 224 aa8.22□□□□□ -1.09
UFD1YGR048W BRE4Q07660 1125 aa8.22□□□□□ -1.09
UFD1YGR048W PEX15Q08215 383 aa8.22□□□□□ -1.09
UFD1YGR048W YPL277CQ08989 487 aa8.22□□□□□ -1.09
UFD1YGR048W SPE3Q12074 293 aaKnown RBP8.22□□□□□ -1.09
UFD1YGR048W NUC1P08466 329 aa8.21□□□□□ -1.1
UFD1YGR048W SSB1P11484 613 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W MRP13P12686 339 aa8.21□□□□□ -1.1
UFD1YGR048W SPO16P17122 198 aa8.21□□□□□ -1.1
UFD1YGR048W CLN2P20438 545 aa8.21□□□□□ -1.1
UFD1YGR048W RPA135P22138 1203 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W PRP22P24384 1145 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W STE5P32917 917 aa8.21□□□□□ -1.1
UFD1YGR048W CUE2P36075 443 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W VPS51P36116 164 aa8.21□□□□□ -1.1
UFD1YGR048W UTP9P38882 575 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W SSB2P40150 613 aaKnown RBP8.21□□□□□ -1.1
UFD1YGR048W QDR2P40474 542 aa8.21□□□□□ -1.1
UFD1YGR048W PRK1P40494 810 aa8.21□□□□□ -1.1
UFD1YGR048W MMM1P41800 426 aa8.21□□□□□ -1.1
UFD1YGR048W AAD14P42884 376 aa8.21□□□□□ -1.1
UFD1YGR048W YJL007CP47080 104 aa8.21□□□□□ -1.1
UFD1YGR048W ZRG17P53735 605 aa8.21□□□□□ -1.1
UFD1YGR048W UBX4P54730 416 aa8.21□□□□□ -1.1
UFD1YGR048W ORC4P54791 529 aa8.21□□□□□ -1.1
UFD1YGR048W OPT2Q06593 877 aa8.21□□□□□ -1.1
UFD1YGR048W YPR196WQ06595 470 aa8.21□□□□□ -1.1
UFD1YGR048W SGT1Q08446 395 aa8.21□□□□□ -1.1
UFD1YGR048W TRE1Q08919 783 aa8.21□□□□□ -1.1
UFD1YGR048W SNU23Q12368 194 aaPredicted RBP8.21□□□□□ -1.1
UFD1YGR048W YLR278CQ05854 1341 aa8.21□□□□□ -1.1
UFD1YGR048W RPN13O13563 156 aa8.2□□□□□ -1.1
UFD1YGR048W CDC19P00549 500 aaKnown RBP8.2□□□□□ -1.1
UFD1YGR048W COR1P07256 457 aa8.2□□□□□ -1.1
UFD1YGR048W TUB1P09733 447 aaKnown RBP8.2□□□□□ -1.1
UFD1YGR048W ALG1P16661 449 aa8.2□□□□□ -1.1
UFD1YGR048W MEF1P25039 761 aa8.2□□□□□ -1.1
UFD1YGR048W RRT12P25381 491 aa8.2□□□□□ -1.1
UFD1YGR048W DGR2P32330 852 aa8.2□□□□□ -1.1
UFD1YGR048W TFC1P32367 649 aa8.2□□□□□ -1.1
UFD1YGR048W TFB1P32776 642 aa8.2□□□□□ -1.1
UFD1YGR048W RER2P35196 286 aa8.2□□□□□ -1.1
UFD1YGR048W YKL050CP35736 922 aa8.2□□□□□ -1.1
UFD1YGR048W STB6P36085 766 aa8.2□□□□□ -1.1
UFD1YGR048W UTP30P36144 274 aaKnown RBP8.2□□□□□ -1.1
UFD1YGR048W NAT2P37293 288 aa8.2□□□□□ -1.1
UFD1YGR048W YPK3P38070 525 aa8.2□□□□□ -1.1
UFD1YGR048W PDX3P38075 228 aaKnown RBP8.2□□□□□ -1.1
UFD1YGR048W STL1P39932 569 aa8.2□□□□□ -1.1
UFD1YGR048W LCP5P40079 357 aaPredicted RBP8.2□□□□□ -1.1
UFD1YGR048W YTA6P40328 754 aa8.2□□□□□ -1.1
UFD1YGR048W VAC7P53950 1165 aa8.2□□□□□ -1.1
UFD1YGR048W GCN5Q03330 439 aa8.2□□□□□ -1.1
UFD1YGR048W YOR352WQ08816 343 aa8.2□□□□□ -1.1
UFD1YGR048W CEX1Q12453 761 aa8.2□□□□□ -1.1
UFD1YGR048W ARG82P07250 355 aa8.19□□□□□ -1.1
UFD1YGR048W MSD1P15179 658 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W PDC5P16467 563 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W CMK2P22517 447 aa8.19□□□□□ -1.1
UFD1YGR048W NPP1P25353 742 aa8.19□□□□□ -1.1
UFD1YGR048W PRP40P33203 583 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W MAE1P36013 669 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W UBP11P36026 717 aa8.19□□□□□ -1.1
UFD1YGR048W RSM22P36056 628 aa8.19□□□□□ -1.1
UFD1YGR048W YBR139WP38109 508 aa8.19□□□□□ -1.1
UFD1YGR048W ERG7P38604 731 aa8.19□□□□□ -1.1
UFD1YGR048W VMA7P39111 118 aa8.19□□□□□ -1.1
UFD1YGR048W SEO1P39709 593 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 194.4 ms