RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W SMC5Q08204 1093 aa5.15□□□□□ -1.59
CDC4YFL009W TRM11Q12463 433 aa5.15□□□□□ -1.59
CDC4YFL009W STF2P16965 84 aa5.14□□□□□ -1.59
CDC4YFL009W TPO5P36029 618 aa5.14□□□□□ -1.59
CDC4YFL009W MAL31P38156 614 aa5.14□□□□□ -1.59
CDC4YFL009W YBR032WP38223 100 aa5.14□□□□□ -1.59
CDC4YFL009W ECM2P38241 364 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W RFC3P38629 340 aa5.14□□□□□ -1.59
CDC4YFL009W RRP8P38961 392 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W PRK1P40494 810 aa5.14□□□□□ -1.59
CDC4YFL009W ULP2P40537 1034 aaPredicted RBP5.14□□□□□ -1.59
CDC4YFL009W BIR1P47134 954 aa5.14□□□□□ -1.59
CDC4YFL009W RSM26P47141 266 aa5.14□□□□□ -1.59
CDC4YFL009W TAF6P53040 516 aa5.14□□□□□ -1.59
CDC4YFL009W RBG2P53295 368 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W SIW14P53965 281 aa5.14□□□□□ -1.59
CDC4YFL009W PEX13P80667 386 aa5.14□□□□□ -1.59
CDC4YFL009W GIS4Q04233 774 aa5.14□□□□□ -1.59
CDC4YFL009W YLR031WQ07978 186 aa5.14□□□□□ -1.59
CDC4YFL009W FAL1Q12099 399 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W TIP41Q12199 356 aa5.14□□□□□ -1.59
CDC4YFL009W SSB1P11484 613 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W YKL063CP35725 167 aa5.14□□□□□ -1.59
CDC4YFL009W YKR078WP36158 585 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W MUM2P38236 366 aa5.14□□□□□ -1.59
CDC4YFL009W SSB2P40150 613 aaKnown RBP5.14□□□□□ -1.59
CDC4YFL009W SWP82P43554 623 aa5.14□□□□□ -1.59
CDC4YFL009W IRC8P47046 822 aa5.14□□□□□ -1.59
CDC4YFL009W SNX4P47057 423 aa5.14□□□□□ -1.59
CDC4YFL009W KEL2P50090 882 aa5.14□□□□□ -1.59
CDC4YFL009W YGL108CP53139 140 aa5.14□□□□□ -1.59
CDC4YFL009W UBX4P54730 416 aa5.14□□□□□ -1.59
CDC4YFL009W PCL8Q08966 492 aa5.14□□□□□ -1.59
CDC4YFL009W ACM1Q08981 209 aa5.14□□□□□ -1.59
CDC4YFL009W CEX1Q12453 761 aa5.14□□□□□ -1.59
CDC4YFL009W TUF1P02992 437 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W PLC1P32383 869 aa5.13□□□□□ -1.59
CDC4YFL009W VMA8P32610 256 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W PPG1P32838 368 aa5.13□□□□□ -1.59
CDC4YFL009W PGM2P37012 569 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W MNN2P38069 597 aa5.13□□□□□ -1.59
CDC4YFL009W AST2P39945 430 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W YER137CP40083 148 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W RIC1P40395 1056 aa5.13□□□□□ -1.59
CDC4YFL009W LSB6P42951 607 aa5.13□□□□□ -1.59
CDC4YFL009W YJL181WP46987 611 aa5.13□□□□□ -1.59
CDC4YFL009W UBA2P52488 636 aa5.13□□□□□ -1.59
CDC4YFL009W MRM2P53123 320 aa5.13□□□□□ -1.59
CDC4YFL009W PTA1Q01329 785 aaPredicted RBP5.13□□□□□ -1.59
CDC4YFL009W UTP6Q02354 440 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W ROD1Q02805 837 aa5.13□□□□□ -1.59
CDC4YFL009W NAN1Q02931 896 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W RMT2Q03305 412 aa5.13□□□□□ -1.59
CDC4YFL009W ACL4Q03771 387 aa5.13□□□□□ -1.59
CDC4YFL009W YDR239CQ03780 787 aa5.13□□□□□ -1.59
CDC4YFL009W ECM11Q04110 302 aa5.13□□□□□ -1.59
CDC4YFL009W VHS3Q08438 674 aa5.13□□□□□ -1.59
CDC4YFL009W YPL066WQ12194 479 aa5.13□□□□□ -1.59
CDC4YFL009W EMP46Q12396 444 aa5.13□□□□□ -1.59
CDC4YFL009W FAS2P19097 1887 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W MET6P05694 767 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W VMA2P16140 517 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W RET1P22276 1149 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W MRPL25P23369 157 aa5.13□□□□□ -1.59
CDC4YFL009W ABD1P32783 436 aaPredicted RBP5.13□□□□□ -1.59
CDC4YFL009W SMY2P32909 740 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W SAS3P34218 831 aa5.13□□□□□ -1.59
CDC4YFL009W SET3P36124 751 aa5.13□□□□□ -1.59
CDC4YFL009W GLY1P37303 387 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W YBR184WP38299 523 aa5.13□□□□□ -1.59
CDC4YFL009W RCK2P38623 610 aa5.13□□□□□ -1.59
CDC4YFL009W LCP5P40079 357 aaPredicted RBP5.13□□□□□ -1.59
CDC4YFL009W MET12P46151 657 aa5.13□□□□□ -1.59
CDC4YFL009W HAM1P47119 197 aaKnown RBP5.13□□□□□ -1.59
CDC4YFL009W ZIP2P53061 704 aa5.13□□□□□ -1.59
CDC4YFL009W YGR016WP53209 190 aa5.13□□□□□ -1.59
CDC4YFL009W IPI3P53877 555 aa5.13□□□□□ -1.59
CDC4YFL009W MDM1Q01846 1127 aa5.13□□□□□ -1.59
CDC4YFL009W YMR187CQ03236 431 aa5.13□□□□□ -1.59
CDC4YFL009W SSP2Q08646 371 aa5.13□□□□□ -1.59
CDC4YFL009W SOG2Q08817 791 aa5.13□□□□□ -1.59
CDC4YFL009W YPT6Q99260 215 aa5.13□□□□□ -1.59
CDC4YFL009W SEM1O94742 89 aa5.12□□□□□ -1.59
CDC4YFL009W HTS1P07263 546 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W PEP5P12868 1029 aa5.12□□□□□ -1.59
CDC4YFL009W RPS5P26783 225 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W GPI10P30777 616 aa5.12□□□□□ -1.59
CDC4YFL009W VPS21P36017 210 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W CCT6P39079 546 aa5.12□□□□□ -1.59
CDC4YFL009W NPT1P39683 429 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W NUP82P40368 713 aa5.12□□□□□ -1.59
CDC4YFL009W RLP7P40693 322 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W TIM54P47045 478 aa5.12□□□□□ -1.59
CDC4YFL009W YGR021WP53212 290 aa5.12□□□□□ -1.59
CDC4YFL009W BNI5P53890 448 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W CUZ1P53899 274 aa5.12□□□□□ -1.59
CDC4YFL009W RPS15Q01855 142 aaKnown RBP5.12□□□□□ -1.59
CDC4YFL009W SHR3Q02774 210 aa5.12□□□□□ -1.59
CDC4YFL009W GPI17Q04080 534 aa5.12□□□□□ -1.59
CDC4YFL009W TDA9Q04545 1251 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms