RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	CAD1	P24813	409 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	BUD2	P33314	1104 aa		4.17	□□□□□ -1.74
SPI1	YER150W	TGL1	P34163	548 aa		4.17	□□□□□ -1.74
SPI1	YER150W	BMH2	P34730	273 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	CUE2	P36075	443 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	YKL023W	P36103	277 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	HEL1	P36113	551 aa		4.17	□□□□□ -1.74
SPI1	YER150W	SET3	P36124	751 aa		4.17	□□□□□ -1.74
SPI1	YER150W	STV1	P37296	890 aa		4.17	□□□□□ -1.74
SPI1	YER150W	MMS4	P38257	691 aa		4.17	□□□□□ -1.74
SPI1	YER150W	YHL017W	P38745	532 aa		4.17	□□□□□ -1.74
SPI1	YER150W	YHR097C	P38809	366 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	KEL1	P38853	1164 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	RPN10	P38886	268 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	SHU2	P38957	223 aa		4.17	□□□□□ -1.74
SPI1	YER150W	YIL089W	P40500	205 aa		4.17	□□□□□ -1.74
SPI1	YER150W	YIL077C	P40508	320 aa		4.17	□□□□□ -1.74
SPI1	YER150W	PRM2	P40534	656 aa		4.17	□□□□□ -1.74
SPI1	YER150W	MSB3	P48566	633 aa	Predicted RBP	4.17	□□□□□ -1.74
SPI1	YER150W	DSD1	P53095	428 aa		4.17	□□□□□ -1.74
SPI1	YER150W	ECM22	Q05958	814 aa	Predicted RBP	4.17	□□□□□ -1.74
SPI1	YER150W	YPQ2	Q06328	317 aa		4.17	□□□□□ -1.74
SPI1	YER150W	SLK19	Q08581	821 aa	Known RBP	4.17	□□□□□ -1.74
SPI1	YER150W	TY3A-G	Q12173	290 aa		4.17	□□□□□ -1.74
SPI1	YER150W	RBD2	Q12270	262 aa		4.17	□□□□□ -1.74
SPI1	YER150W	GPM3	Q12326	303 aa		4.17	□□□□□ -1.74
SPI1	YER150W	TY3A-I	Q99219	290 aa		4.17	□□□□□ -1.74
SPI1	YER150W	JIP3	O13555	125 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PHO5	P00635	467 aa		4.16	□□□□□ -1.74
SPI1	YER150W	CAR2	P07991	424 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	RPL19A	P0CX82	189 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	RPL19B	P0CX83	189 aa	Predicted RBP	4.16	□□□□□ -1.74
SPI1	YER150W	DBP5	P20449	482 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	ATP12	P22135	325 aa		4.16	□□□□□ -1.74
SPI1	YER150W	STE11	P23561	717 aa		4.16	□□□□□ -1.74
SPI1	YER150W	TRK2	P28584	889 aa		4.16	□□□□□ -1.74
SPI1	YER150W	MGM101	P32787	269 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	SRP101	P32916	621 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PHO11	P35842	467 aa		4.16	□□□□□ -1.74
SPI1	YER150W	GPT2	P36148	743 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PGM2	P37012	569 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	YRO2	P38079	344 aa		4.16	□□□□□ -1.74
SPI1	YER150W	ERT1	P38140	529 aa		4.16	□□□□□ -1.74
SPI1	YER150W	RFC3	P38629	340 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PHO12	P38693	467 aa		4.16	□□□□□ -1.74
SPI1	YER150W	TCD1	P38756	429 aa		4.16	□□□□□ -1.74
SPI1	YER150W	AIM46	P38885	310 aa		4.16	□□□□□ -1.74
SPI1	YER150W	STN1	P38960	494 aa		4.16	□□□□□ -1.74
SPI1	YER150W	MTW1	P39731	289 aa		4.16	□□□□□ -1.74
SPI1	YER150W	SIP5	P40210	489 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	YJR061W	P40355	935 aa		4.16	□□□□□ -1.74
SPI1	YER150W	QDR2	P40474	542 aa		4.16	□□□□□ -1.74
SPI1	YER150W	LOC1	P43586	204 aa	Predicted RBP	4.16	□□□□□ -1.74
SPI1	YER150W	ALK1	P43633	760 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	NUP85	P46673	744 aa		4.16	□□□□□ -1.74
SPI1	YER150W	ASE1	P50275	885 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PDR16	P53860	351 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	ISU1	Q03020	165 aa		4.16	□□□□□ -1.74
SPI1	YER150W	UTP5	Q04177	643 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	MMR1	Q06324	491 aa		4.16	□□□□□ -1.74
SPI1	YER150W	OPT2	Q06593	877 aa		4.16	□□□□□ -1.74
SPI1	YER150W	ARR2	Q06597	130 aa		4.16	□□□□□ -1.74
SPI1	YER150W	LOT6	Q07923	191 aa		4.16	□□□□□ -1.74
SPI1	YER150W	PML1	Q07930	204 aa	Predicted RBP	4.16	□□□□□ -1.74
SPI1	YER150W	MET7	Q08645	548 aa		4.16	□□□□□ -1.74
SPI1	YER150W	MCH5	Q08777	521 aa		4.16	□□□□□ -1.74
SPI1	YER150W	CTI6	Q08923	506 aa		4.16	□□□□□ -1.74
SPI1	YER150W	CWC2	Q12046	339 aa	Predicted RBP	4.16	□□□□□ -1.74
SPI1	YER150W	PSF3	Q12146	194 aa		4.16	□□□□□ -1.74
SPI1	YER150W	GET3	Q12154	354 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	GRX6	Q12438	231 aa		4.16	□□□□□ -1.74
SPI1	YER150W	RPS21B	Q3E754	87 aa	Known RBP	4.16	□□□□□ -1.74
SPI1	YER150W	YOL159C-A	Q3E769	90 aa		4.16	□□□□□ -1.74
SPI1	YER150W	YBR126W-A	Q8TGU7	68 aa		4.16	□□□□□ -1.74
SPI1	YER150W	ADH4	P10127	382 aa		4.15	□□□□□ -1.75
SPI1	YER150W	THR4	P16120	514 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	BET2	P20133	325 aa		4.15	□□□□□ -1.75
SPI1	YER150W	ADE2	P21264	571 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	CPR2	P23285	205 aa		4.15	□□□□□ -1.75
SPI1	YER150W	CLB3	P24870	427 aa		4.15	□□□□□ -1.75
SPI1	YER150W	PEP3	P27801	918 aa		4.15	□□□□□ -1.75
SPI1	YER150W	SEC65	P29478	273 aa		4.15	□□□□□ -1.75
SPI1	YER150W	MSN4	P33749	630 aa		4.15	□□□□□ -1.75
SPI1	YER150W	EMC3	P36039	253 aa		4.15	□□□□□ -1.75
SPI1	YER150W	ADH5	P38113	351 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	NTC20	P38302	140 aa	Predicted RBP	4.15	□□□□□ -1.75
SPI1	YER150W	MUP3	P38734	546 aa		4.15	□□□□□ -1.75
SPI1	YER150W	YHR054C	P38780	354 aa		4.15	□□□□□ -1.75
SPI1	YER150W	LYS9	P38999	446 aa		4.15	□□□□□ -1.75
SPI1	YER150W	SCS2	P40075	244 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	HXT10	P43581	546 aa		4.15	□□□□□ -1.75
SPI1	YER150W	SIP4	P46954	829 aa		4.15	□□□□□ -1.75
SPI1	YER150W	MRX6	P48564	524 aa		4.15	□□□□□ -1.75
SPI1	YER150W	RET3	P53600	189 aa		4.15	□□□□□ -1.75
SPI1	YER150W	SMA1	Q02651	245 aa		4.15	□□□□□ -1.75
SPI1	YER150W	EFR3	Q03653	782 aa	Known RBP	4.15	□□□□□ -1.75
SPI1	YER150W	RRP17	Q04031	235 aa	Predicted RBP	4.15	□□□□□ -1.75
SPI1	YER150W	SEG1	Q04279	960 aa		4.15	□□□□□ -1.75
SPI1	YER150W	YDR514C	Q04408	483 aa		4.15	□□□□□ -1.75
SPI1	YER150W	RTN1	Q04947	295 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms