RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 STS1P38637 319 aa6.94□□□□□ -1.3
snR48snR48 YFR006WP43590 535 aa6.94□□□□□ -1.3
snR48snR48 YEL023CP39992 682 aa6.93□□□□□ -1.3
snR48snR48 GYP5Q12344 894 aa6.92□□□□□ -1.3
snR48snR48 ELP4Q02884 456 aaKnown RBP6.9□□□□□ -1.3
snR48snR48 DCW1P36091 449 aa6.85□□□□□ -1.31
snR48snR48 ARH1P48360 493 aa6.84□□□□□ -1.31
snR48snR48 RTG3P38165 486 aa6.82□□□□□ -1.32
snR48snR48 PML39Q03760 334 aa6.81□□□□□ -1.32
snR48snR48 SPT23P35210 1082 aa6.75□□□□□ -1.33
snR48snR48 YPL062WQ02781 134 aa6.68□□□□□ -1.34
snR48snR48 YML082WQ04533 649 aaKnown RBP6.66□□□□□ -1.34
snR48snR48 RAS1P01119 309 aa6.63□□□□□ -1.35
snR48snR48 BNI4P53858 892 aa6.63□□□□□ -1.35
snR48snR48 MID1P41821 548 aa6.62□□□□□ -1.35
snR48snR48 TRK1P12685 1235 aa6.6□□□□□ -1.35
snR48snR48 RCR1P38212 213 aa6.6□□□□□ -1.35
snR48snR48 HAP5Q02516 242 aa6.6□□□□□ -1.35
snR48snR48 CST9Q06032 482 aa6.6□□□□□ -1.35
snR48snR48 GRE2Q12068 342 aaKnown RBP6.59□□□□□ -1.35
snR48snR48 NST1P53935 1240 aa6.57□□□□□ -1.36
snR48snR48 ARP8Q12386 881 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
snR48snR48 PTC2P39966 464 aaKnown RBP6.56□□□□□ -1.36
snR48snR48 PEX29Q03370 554 aa6.54□□□□□ -1.36
snR48snR48 MGA2P40578 1113 aa6.5□□□□□ -1.37
snR48snR48 GUT1P32190 709 aa6.49□□□□□ -1.37
snR48snR48 AMS1P22855 1083 aa6.47□□□□□ -1.37
snR48snR48 AI4P03878 556 aa6.46□□□□□ -1.38
snR48snR48 MPH3P0CE00 602 aa6.45□□□□□ -1.38
snR48snR48 ATH1P48016 1211 aa6.45□□□□□ -1.38
snR48snR48 SSP1P38871 571 aa6.44□□□□□ -1.38
snR48snR48 SOL3P38858 249 aa6.41□□□□□ -1.38
snR48snR48 MPC54Q08550 464 aa6.4□□□□□ -1.38
snR48snR48 ILV3P39522 585 aaKnown RBP6.38□□□□□ -1.39
snR48snR48 YPR015CQ12531 247 aa6.38□□□□□ -1.39
snR48snR48 PTC3P34221 468 aaKnown RBP6.37□□□□□ -1.39
snR48snR48 NMA111P53920 997 aa6.35□□□□□ -1.39
snR48snR48 RAM1P22007 431 aa6.33□□□□□ -1.4
snR48snR48 EDS1P38073 919 aa6.32□□□□□ -1.4
snR48snR48 SDH2P21801 266 aa6.31□□□□□ -1.4
snR48snR48 MIF2P35201 549 aa6.29□□□□□ -1.4
snR48snR48 GYP1Q08484 637 aa6.28□□□□□ -1.4
snR48snR48 SAS4Q04003 481 aa6.26□□□□□ -1.41
snR48snR48 DPL1Q05567 589 aa6.26□□□□□ -1.41
snR48snR48 BRE2P43132 505 aa6.25□□□□□ -1.41
snR48snR48 GAR1P28007 205 aaKnown RBP6.24□□□□□ -1.41
snR48snR48 YEL077CQ3E7X8 1277 aa6.24□□□□□ -1.41
snR48snR48 MAK11P20484 414 aaKnown RBP6.23□□□□□ -1.41
snR48snR48 GBP2P25555 427 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
snR48snR48 TFA1P36100 482 aa6.2□□□□□ -1.42
snR48snR48 SLI15P38283 698 aa6.19□□□□□ -1.42
snR48snR48 YGR273CP53329 174 aa6.19□□□□□ -1.42
snR48snR48 GCR2Q01722 534 aa6.19□□□□□ -1.42
snR48snR48 ISU2Q12056 156 aa6.18□□□□□ -1.42
snR48snR48 COQ8P27697 501 aa6.12□□□□□ -1.43
snR48snR48 MRF1P30775 413 aaPredicted RBP6.11□□□□□ -1.43
snR48snR48 RAM2P29703 316 aa6.07□□□□□ -1.44
snR48snR48 AIR1P40507 360 aaKnown RBP6.07□□□□□ -1.44
snR48snR48 ENV9Q08651 330 aa6.07□□□□□ -1.44
snR48snR48 PDR1P12383 1068 aa6.06□□□□□ -1.44
snR48snR48 MET22P32179 357 aa6.06□□□□□ -1.44
snR48snR48 NOP53Q12080 455 aaKnown RBP6.05□□□□□ -1.44
snR48snR48 MTC5Q03897 1148 aa6.01□□□□□ -1.45
snR48snR48 CLA4P48562 842 aa5.99□□□□□ -1.45
snR48snR48 CDC73Q06697 393 aa5.99□□□□□ -1.45
snR48snR48 YDL176WQ12027 708 aa5.98□□□□□ -1.45
snR48snR48 ERG12P07277 443 aa5.96□□□□□ -1.46
snR48snR48 CDC4P07834 779 aa5.96□□□□□ -1.46
snR48snR48 CST6P40535 587 aa5.96□□□□□ -1.46
snR48snR48 PRT1P06103 763 aaKnown RBP5.95□□□□□ -1.46
snR48snR48 BUD20Q08004 166 aaPredicted RBP5.95□□□□□ -1.46
snR48snR48 KEX1P09620 729 aa5.94□□□□□ -1.46
snR48snR48 YDR444WQ04093 687 aa5.94□□□□□ -1.46
snR48snR48 LAM6Q08001 693 aa5.93□□□□□ -1.46
snR48snR48 LCB5Q06147 687 aaKnown RBP5.89□□□□□ -1.47
snR48snR48 STR2P47164 639 aa5.83□□□□□ -1.48
snR48snR48 RPP1BP10622 106 aaKnown RBP5.8□□□□□ -1.48
snR48snR48 ISM1P48526 1002 aa5.79□□□□□ -1.48
snR48snR48 HED1Q03937 162 aa5.79□□□□□ -1.48
snR48snR48 YLR326WQ06170 240 aaKnown RBP5.77□□□□□ -1.49
snR48snR48 FRK1Q03002 865 aaPredicted RBP5.76□□□□□ -1.49
snR48snR48 PCS60P38137 543 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
snR48snR48 UBP14P38237 781 aaKnown RBP5.74□□□□□ -1.49
snR48snR48 BDP1P46678 594 aa5.74□□□□□ -1.49
snR48snR48 YRR1Q12172 810 aa5.74□□□□□ -1.49
snR48snR48 SPT16P32558 1035 aaKnown RBP5.73□□□□□ -1.49
snR48snR48 RRD1P40454 393 aaKnown RBP5.73□□□□□ -1.49
snR48snR48 NUD1P32336 851 aa5.71□□□□□ -1.5
snR48snR48 TY1A-DR4O74302 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-HP0C2I4 478 aaKnown RBP5.7□□□□□ -1.5
snR48snR48 TY1A-AP0CX57 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-PR1P0CX58 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-ORP0CX59 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-PR2P0CX60 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-DR5P0CX65 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-ER2P0CX66 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-GR3P0CX67 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-LR1P0CX68 440 aa5.7□□□□□ -1.5
snR48snR48 TY1A-MR2P0CX69 440 aa5.7□□□□□ -1.5
snR48snR48 AFT1P22149 690 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms