RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C CKB1P43639 278 aa9.53□□□□□ -0.88
HAL1YPR005C RTG1P32607 177 aa9.52□□□□□ -0.89
HAL1YPR005C SPB4P25808 606 aaPredicted RBP9.51□□□□□ -0.89
HAL1YPR005C YNL035CP53962 389 aaKnown RBP9.5□□□□□ -0.89
HAL1YPR005C MIF2P35201 549 aa9.48□□□□□ -0.89
HAL1YPR005C HTA1P04911 132 aaKnown RBP9.47□□□□□ -0.89
HAL1YPR005C HTA2P04912 132 aa9.47□□□□□ -0.89
HAL1YPR005C SEC61P32915 480 aa9.47□□□□□ -0.89
HAL1YPR005C VPS70P47161 811 aa9.47□□□□□ -0.89
HAL1YPR005C NCR1Q12200 1170 aa9.46□□□□□ -0.9
HAL1YPR005C DCW1P36091 449 aa9.45□□□□□ -0.9
HAL1YPR005C JIP4Q03361 876 aa9.45□□□□□ -0.9
HAL1YPR005C GRE2Q12068 342 aaKnown RBP9.45□□□□□ -0.9
HAL1YPR005C BMT6Q12291 365 aa9.45□□□□□ -0.9
HAL1YPR005C EDS1P38073 919 aa9.44□□□□□ -0.9
HAL1YPR005C NOP53Q12080 455 aaKnown RBP9.44□□□□□ -0.9
HAL1YPR005C COQ8P27697 501 aa9.43□□□□□ -0.9
HAL1YPR005C PTC3P34221 468 aaKnown RBP9.42□□□□□ -0.9
HAL1YPR005C DAN4P47179 1161 aa9.42□□□□□ -0.9
HAL1YPR005C RLF2Q12495 606 aa9.4□□□□□ -0.9
HAL1YPR005C PTC4P38089 393 aa9.39□□□□□ -0.91
HAL1YPR005C YEL023CP39992 682 aa9.39□□□□□ -0.91
HAL1YPR005C GUT1P32190 709 aa9.37□□□□□ -0.91
HAL1YPR005C TFG1P41895 735 aaPredicted RBP9.37□□□□□ -0.91
HAL1YPR005C ATH1P48016 1211 aa9.37□□□□□ -0.91
HAL1YPR005C DSF2P38213 736 aa9.31□□□□□ -0.92
HAL1YPR005C PBS2P08018 668 aa9.29□□□□□ -0.92
HAL1YPR005C YDL129WQ07555 291 aa9.29□□□□□ -0.92
HAL1YPR005C SAP30P38429 201 aa9.26□□□□□ -0.93
HAL1YPR005C YNR021WP53723 404 aaKnown RBP9.26□□□□□ -0.93
HAL1YPR005C NST1P53935 1240 aa9.25□□□□□ -0.93
HAL1YPR005C KIN1P13185 1064 aa9.24□□□□□ -0.93
HAL1YPR005C REF2P42073 533 aaPredicted RBP9.23□□□□□ -0.93
HAL1YPR005C SOL3P38858 249 aa9.22□□□□□ -0.93
HAL1YPR005C HGH1P48362 394 aaKnown RBP9.21□□□□□ -0.94
HAL1YPR005C AI4P03878 556 aa9.18□□□□□ -0.94
HAL1YPR005C PML39Q03760 334 aa9.18□□□□□ -0.94
HAL1YPR005C MAM3Q12296 706 aa9.18□□□□□ -0.94
HAL1YPR005C MPH3P0CE00 602 aa9.17□□□□□ -0.94
HAL1YPR005C MAK21Q12176 1025 aaKnown RBP9.17□□□□□ -0.94
HAL1YPR005C GLC3P32775 704 aa9.16□□□□□ -0.94
HAL1YPR005C YGR273CP53329 174 aa9.16□□□□□ -0.94
HAL1YPR005C AIM7Q12156 149 aa9.16□□□□□ -0.94
HAL1YPR005C CHL1P22516 861 aaPredicted RBP9.14□□□□□ -0.95
HAL1YPR005C IES2P40154 320 aa9.14□□□□□ -0.95
HAL1YPR005C PRE3P38624 215 aa9.13□□□□□ -0.95
HAL1YPR005C COX6P00427 148 aa9.11□□□□□ -0.95
HAL1YPR005C ILV3P39522 585 aaKnown RBP9.09□□□□□ -0.95
HAL1YPR005C MID1P41821 548 aa9.07□□□□□ -0.96
HAL1YPR005C NUP42P49686 430 aaKnown RBP9.07□□□□□ -0.96
HAL1YPR005C ARH1P48360 493 aa9.04□□□□□ -0.96
HAL1YPR005C DIT2P21595 489 aa9.03□□□□□ -0.96
HAL1YPR005C YDR344CQ05510 147 aa9.03□□□□□ -0.96
HAL1YPR005C ELP4Q02884 456 aaKnown RBP9.02□□□□□ -0.97
HAL1YPR005C UBP14P38237 781 aaKnown RBP9.01□□□□□ -0.97
HAL1YPR005C VHR2P40041 505 aa9.01□□□□□ -0.97
HAL1YPR005C PEX29Q03370 554 aa9.01□□□□□ -0.97
HAL1YPR005C BCK2P33306 851 aa9□□□□□ -0.97
HAL1YPR005C KEX1P09620 729 aa8.99□□□□□ -0.97
HAL1YPR005C YDR090CQ03193 310 aa8.99□□□□□ -0.97
HAL1YPR005C SLI15P38283 698 aa8.98□□□□□ -0.97
HAL1YPR005C GUA1P38625 525 aaKnown RBP8.98□□□□□ -0.97
HAL1YPR005C ATF2P53296 535 aa8.98□□□□□ -0.97
HAL1YPR005C YLR326WQ06170 240 aaKnown RBP8.98□□□□□ -0.97
HAL1YPR005C KIC1P38692 1080 aa8.96□□□□□ -0.98
HAL1YPR005C HPC2Q01448 625 aa8.95□□□□□ -0.98
HAL1YPR005C MPC54Q08550 464 aa8.95□□□□□ -0.98
HAL1YPR005C HAP5Q02516 242 aa8.93□□□□□ -0.98
HAL1YPR005C SPT23P35210 1082 aa8.92□□□□□ -0.98
HAL1YPR005C RAD54P32863 898 aa8.91□□□□□ -0.98
HAL1YPR005C DPL1Q05567 589 aa8.9□□□□□ -0.98
HAL1YPR005C VRP1P37370 817 aa8.89□□□□□ -0.99
HAL1YPR005C BNI4P53858 892 aa8.89□□□□□ -0.99
HAL1YPR005C PSE1P32337 1089 aaKnown RBP8.88□□□□□ -0.99
HAL1YPR005C PCS60P38137 543 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
HAL1YPR005C NMA111P53920 997 aa8.88□□□□□ -0.99
HAL1YPR005C BRL1P38770 471 aa8.87□□□□□ -0.99
HAL1YPR005C TFB3Q03290 321 aa8.87□□□□□ -0.99
HAL1YPR005C XDJ1P39102 459 aa8.84□□□□□ -0.99
HAL1YPR005C SSA2P10592 639 aaKnown RBP8.82□□□□□ -1
HAL1YPR005C YML082WQ04533 649 aaKnown RBP8.82□□□□□ -1
HAL1YPR005C CDC73Q06697 393 aa8.82□□□□□ -1
HAL1YPR005C ISU2Q12056 156 aa8.82□□□□□ -1
HAL1YPR005C SSA1P10591 642 aaKnown RBP8.81□□□□□ -1
HAL1YPR005C PTC2P39966 464 aaKnown RBP8.81□□□□□ -1
HAL1YPR005C RPP1BP10622 106 aaKnown RBP8.79□□□□□ -1
HAL1YPR005C ORC6P38826 435 aa8.79□□□□□ -1
HAL1YPR005C YML020WQ03722 664 aa8.79□□□□□ -1
HAL1YPR005C GEF1P37020 779 aa8.77□□□□□ -1.01
HAL1YPR005C PKC1P24583 1151 aa8.73□□□□□ -1.01
HAL1YPR005C TEA1P47988 759 aa8.73□□□□□ -1.01
HAL1YPR005C CLB5P30283 435 aa8.72□□□□□ -1.01
HAL1YPR005C CSN12P47130 423 aa8.72□□□□□ -1.01
HAL1YPR005C SUB2Q07478 446 aaKnown RBP8.72□□□□□ -1.01
HAL1YPR005C NOP8Q08287 484 aaPredicted RBP8.72□□□□□ -1.01
HAL1YPR005C RGR1P19263 1082 aa8.71□□□□□ -1.02
HAL1YPR005C GAP1P19145 602 aaPredicted RBP8.7□□□□□ -1.02
HAL1YPR005C RAM1P22007 431 aa8.7□□□□□ -1.02
HAL1YPR005C CSC1Q06538 782 aa8.7□□□□□ -1.02
HAL1YPR005C SLX8P40072 274 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms