RNA–Protein interactions for RNA: YPL218W

SAR1, Transcript of GTPase, GTP-binding protein of the ARF family, yeast

Gene SAR1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAR1	YPL218W	COQ8	P27697	501 aa		5.04	□□□□□ -1.6
SAR1	YPL218W	EDS1	P38073	919 aa		5.04	□□□□□ -1.6
SAR1	YPL218W	GRE2	Q12068	342 aa	Known RBP	5.04	□□□□□ -1.6
SAR1	YPL218W	YEL023C	P39992	682 aa		5.03	□□□□□ -1.6
SAR1	YPL218W	TFG1	P41895	735 aa	Predicted RBP	5.03	□□□□□ -1.6
SAR1	YPL218W	NOP53	Q12080	455 aa	Known RBP	5.03	□□□□□ -1.6
SAR1	YPL218W	PTC3	P34221	468 aa	Known RBP	5.02	□□□□□ -1.61
SAR1	YPL218W	GUT1	P32190	709 aa		5.01	□□□□□ -1.61
SAR1	YPL218W	PTC4	P38089	393 aa		5.01	□□□□□ -1.61
SAR1	YPL218W	SAP30	P38429	201 aa		5.01	□□□□□ -1.61
SAR1	YPL218W	ATH1	P48016	1211 aa		5	□□□□□ -1.61
SAR1	YPL218W	YDL129W	Q07555	291 aa		4.99	□□□□□ -1.61
SAR1	YPL218W	NST1	P53935	1240 aa		4.95	□□□□□ -1.62
SAR1	YPL218W	PML39	Q03760	334 aa		4.93	□□□□□ -1.62
SAR1	YPL218W	SOL3	P38858	249 aa		4.92	□□□□□ -1.62
SAR1	YPL218W	AI4	P03878	556 aa		4.91	□□□□□ -1.62
SAR1	YPL218W	MPH3	P0CE00	602 aa		4.91	□□□□□ -1.62
SAR1	YPL218W	CHL1	P22516	861 aa	Predicted RBP	4.91	□□□□□ -1.62
SAR1	YPL218W	PRE3	P38624	215 aa		4.91	□□□□□ -1.62
SAR1	YPL218W	SET1	P38827	1080 aa	Known RBP	4.91	□□□□□ -1.62
SAR1	YPL218W	YDR344C	Q05510	147 aa		4.9	□□□□□ -1.63
SAR1	YPL218W	YGR273C	P53329	174 aa		4.89	□□□□□ -1.63
SAR1	YPL218W	MID1	P41821	548 aa		4.88	□□□□□ -1.63
SAR1	YPL218W	BCK2	P33306	851 aa		4.86	□□□□□ -1.63
SAR1	YPL218W	ILV3	P39522	585 aa	Known RBP	4.86	□□□□□ -1.63
SAR1	YPL218W	ELP4	Q02884	456 aa	Known RBP	4.86	□□□□□ -1.63
SAR1	YPL218W	IFH1	P39520	1085 aa		4.85	□□□□□ -1.63
SAR1	YPL218W	PEX29	Q03370	554 aa		4.83	□□□□□ -1.64
SAR1	YPL218W	ARH1	P48360	493 aa		4.82	□□□□□ -1.64
SAR1	YPL218W	YPR148C	Q06523	435 aa		4.82	□□□□□ -1.64
SAR1	YPL218W	VRP1	P37370	817 aa		4.81	□□□□□ -1.64
SAR1	YPL218W	KEX1	P09620	729 aa		4.8	□□□□□ -1.64
SAR1	YPL218W	SLI15	P38283	698 aa		4.79	□□□□□ -1.64
SAR1	YPL218W	UBP14	P38237	781 aa	Known RBP	4.78	□□□□□ -1.64
SAR1	YPL218W	YLR326W	Q06170	240 aa	Known RBP	4.78	□□□□□ -1.64
SAR1	YPL218W	MPC54	Q08550	464 aa		4.78	□□□□□ -1.64
SAR1	YPL218W	HAP5	Q02516	242 aa		4.77	□□□□□ -1.65
SAR1	YPL218W	SPT23	P35210	1082 aa		4.76	□□□□□ -1.65
SAR1	YPL218W	XDJ1	P39102	459 aa		4.75	□□□□□ -1.65
SAR1	YPL218W	VHR2	P40041	505 aa		4.75	□□□□□ -1.65
SAR1	YPL218W	BNI4	P53858	892 aa		4.75	□□□□□ -1.65
SAR1	YPL218W	DPL1	Q05567	589 aa		4.75	□□□□□ -1.65
SAR1	YPL218W	RAD54	P32863	898 aa		4.74	□□□□□ -1.65
SAR1	YPL218W	REF2	P42073	533 aa	Predicted RBP	4.74	□□□□□ -1.65
SAR1	YPL218W	NMA111	P53920	997 aa		4.74	□□□□□ -1.65
SAR1	YPL218W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SAR1	YPL218W	YDR090C	Q03193	310 aa		4.72	□□□□□ -1.65
SAR1	YPL218W	PTC2	P39966	464 aa	Known RBP	4.71	□□□□□ -1.66
SAR1	YPL218W	VPS70	P47161	811 aa		4.71	□□□□□ -1.66
SAR1	YPL218W	YML082W	Q04533	649 aa	Known RBP	4.71	□□□□□ -1.66
SAR1	YPL218W	CDC73	Q06697	393 aa		4.71	□□□□□ -1.66
SAR1	YPL218W	ISU2	Q12056	156 aa		4.71	□□□□□ -1.66
SAR1	YPL218W	RPP1B	P10622	106 aa	Known RBP	4.7	□□□□□ -1.66
SAR1	YPL218W	MAK21	Q12176	1025 aa	Known RBP	4.7	□□□□□ -1.66
SAR1	YPL218W	KIC1	P38692	1080 aa		4.69	□□□□□ -1.66
SAR1	YPL218W	DMA1	P38823	416 aa		4.69	□□□□□ -1.66
SAR1	YPL218W	CKB1	P43639	278 aa		4.68	□□□□□ -1.66
SAR1	YPL218W	DPS1	P04802	557 aa	Known RBP	4.67	□□□□□ -1.66
SAR1	YPL218W	SAS10	Q12136	610 aa	Predicted RBP	4.67	□□□□□ -1.66
SAR1	YPL218W	COX6	P00427	148 aa		4.66	□□□□□ -1.66
SAR1	YPL218W	GAP1	P19145	602 aa	Predicted RBP	4.66	□□□□□ -1.66
SAR1	YPL218W	YPR015C	Q12531	247 aa		4.66	□□□□□ -1.66
SAR1	YPL218W	RAM1	P22007	431 aa		4.65	□□□□□ -1.67
SAR1	YPL218W	CSC1	Q06538	782 aa		4.64	□□□□□ -1.67
SAR1	YPL218W	TFB4	Q12004	338 aa		4.64	□□□□□ -1.67
SAR1	YPL218W	PDR1	P12383	1068 aa		4.63	□□□□□ -1.67
SAR1	YPL218W	ORC6	P38826	435 aa		4.63	□□□□□ -1.67
SAR1	YPL218W	PBS2	P08018	668 aa		4.61	□□□□□ -1.67
SAR1	YPL218W	PEX21	P50091	288 aa		4.6	□□□□□ -1.67
SAR1	YPL218W	DSF2	P38213	736 aa		4.58	□□□□□ -1.68
SAR1	YPL218W	GYP1	Q08484	637 aa		4.58	□□□□□ -1.68
SAR1	YPL218W	YRR1	Q12172	810 aa		4.58	□□□□□ -1.68
SAR1	YPL218W	RAS1	P01119	309 aa		4.57	□□□□□ -1.68
SAR1	YPL218W	MVP1	P40959	511 aa	Known RBP	4.57	□□□□□ -1.68
SAR1	YPL218W	SAS4	Q04003	481 aa		4.57	□□□□□ -1.68
SAR1	YPL218W	RGR1	P19263	1082 aa		4.56	□□□□□ -1.68
SAR1	YPL218W	TUM1	Q08686	304 aa	Known RBP	4.56	□□□□□ -1.68
SAR1	YPL218W	MAM3	Q12296	706 aa		4.56	□□□□□ -1.68
SAR1	YPL218W	RQC2	Q12532	1038 aa	Known RBP	4.56	□□□□□ -1.68
SAR1	YPL218W	PSE1	P32337	1089 aa	Known RBP	4.55	□□□□□ -1.68
SAR1	YPL218W	SRC1	Q03707	834 aa		4.55	□□□□□ -1.68
SAR1	YPL218W	NUD1	P32336	851 aa		4.54	□□□□□ -1.68
SAR1	YPL218W	STR2	P47164	639 aa		4.54	□□□□□ -1.68
SAR1	YPL218W	BUD20	Q08004	166 aa	Predicted RBP	4.54	□□□□□ -1.68
SAR1	YPL218W	ISM1	P48526	1002 aa		4.53	□□□□□ -1.68
SAR1	YPL218W	YPR109W	Q06104	294 aa		4.53	□□□□□ -1.68
SAR1	YPL218W	PRT1	P06103	763 aa	Known RBP	4.52	□□□□□ -1.69
SAR1	YPL218W	SDH2	P21801	266 aa		4.52	□□□□□ -1.69
SAR1	YPL218W	CLB5	P30283	435 aa		4.52	□□□□□ -1.69
SAR1	YPL218W	IES2	P40154	320 aa		4.52	□□□□□ -1.69
SAR1	YPL218W	NPL4	P33755	580 aa		4.51	□□□□□ -1.69
SAR1	YPL218W	AMS1	P22855	1083 aa		4.5	□□□□□ -1.69
SAR1	YPL218W	SPB4	P25808	606 aa	Predicted RBP	4.5	□□□□□ -1.69
SAR1	YPL218W	MRF1	P30775	413 aa	Predicted RBP	4.5	□□□□□ -1.69
SAR1	YPL218W	NUP42	P49686	430 aa	Known RBP	4.5	□□□□□ -1.69
SAR1	YPL218W	TY1A-DR4	O74302	440 aa		4.48	□□□□□ -1.69
SAR1	YPL218W	TY1A-H	P0C2I4	478 aa	Known RBP	4.48	□□□□□ -1.69
SAR1	YPL218W	TY1A-A	P0CX57	440 aa		4.48	□□□□□ -1.69
SAR1	YPL218W	TY1A-PR1	P0CX58	440 aa		4.48	□□□□□ -1.69
SAR1	YPL218W	TY1A-OR	P0CX59	440 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms