RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE5YOR042W POL1P13382 1468 aa8□□□□□ -1.13
CUE5YOR042W NSR1P27476 414 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
CUE5YOR042W YAP5P40574 245 aa7.99□□□□□ -1.13
CUE5YOR042W RKR1Q04781 1562 aa7.98□□□□□ -1.13
CUE5YOR042W TY1B-DR3Q99231 1755 aa7.97□□□□□ -1.13
CUE5YOR042W YOR238WQ08634 303 aa7.97□□□□□ -1.13
CUE5YOR042W YCF1P39109 1515 aaKnown RBP7.97□□□□□ -1.13
CUE5YOR042W TY2B-BQ12491 1770 aa7.97□□□□□ -1.13
CUE5YOR042W TY1B-BRQ12193 1756 aa7.95□□□□□ -1.14
CUE5YOR042W TY1B-GR3Q12316 1755 aa7.95□□□□□ -1.14
CUE5YOR042W TY1B-ORQ92393 1755 aa7.95□□□□□ -1.14
CUE5YOR042W MAK11P20484 414 aaKnown RBP7.95□□□□□ -1.14
CUE5YOR042W DBP1P24784 617 aaKnown RBP7.94□□□□□ -1.14
CUE5YOR042W YFR006WP43590 535 aa7.93□□□□□ -1.14
CUE5YOR042W TY1B-HO13535 1793 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-DR5P0C2I2 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-DR6P0C2I3 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-LR2P0C2I5 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-LR3P0C2I6 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W TY1B-PR1P0C2I9 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W TY1B-PR2P0C2J0 1756 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-PR3P0C2J1 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W TY1B-JR1P47098 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-ML2Q03434 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W TY1B-ER1Q03612 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-ML1Q04711 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W TY1B-GR2Q12269 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-OLQ12273 1755 aa7.92□□□□□ -1.14
CUE5YOR042W TY1B-PLQ12414 1755 aaKnown RBP7.92□□□□□ -1.14
CUE5YOR042W STS1P38637 319 aa7.92□□□□□ -1.14
CUE5YOR042W STU1P38198 1513 aa7.92□□□□□ -1.14
CUE5YOR042W PIB1Q06651 286 aa7.91□□□□□ -1.14
CUE5YOR042W TOP2P06786 1428 aaKnown RBP7.91□□□□□ -1.14
CUE5YOR042W CDC25P04821 1589 aa7.9□□□□□ -1.14
CUE5YOR042W ESC1Q03661 1658 aaKnown RBP7.89□□□□□ -1.15
CUE5YOR042W YOR1P53049 1477 aa7.89□□□□□ -1.15
CUE5YOR042W SET1P38827 1080 aaKnown RBP7.89□□□□□ -1.15
CUE5YOR042W MST1P07236 462 aa7.87□□□□□ -1.15
CUE5YOR042W SMC4Q12267 1418 aa7.85□□□□□ -1.15
CUE5YOR042W CHD1P32657 1468 aa7.84□□□□□ -1.15
CUE5YOR042W COQ8P27697 501 aa7.84□□□□□ -1.15
CUE5YOR042W MIF2P35201 549 aa7.84□□□□□ -1.15
CUE5YOR042W SAS10Q12136 610 aaPredicted RBP7.81□□□□□ -1.16
CUE5YOR042W RPA190P10964 1664 aaKnown RBP7.8□□□□□ -1.16
CUE5YOR042W GTT3P39996 337 aa7.8□□□□□ -1.16
CUE5YOR042W VMA1P17255 1071 aaKnown RBP7.79□□□□□ -1.16
CUE5YOR042W MYO4P32492 1471 aa7.79□□□□□ -1.16
CUE5YOR042W PAN1P32521 1480 aa7.79□□□□□ -1.16
CUE5YOR042W MMS22Q06164 1454 aa7.78□□□□□ -1.16
CUE5YOR042W DNF1P32660 1571 aa7.78□□□□□ -1.16
CUE5YOR042W TY1B-JR2P47100 1755 aaKnown RBP7.78□□□□□ -1.16
CUE5YOR042W TY1B-ER2Q03619 1755 aa7.78□□□□□ -1.16
CUE5YOR042W TY1B-MR1Q04214 1755 aa7.78□□□□□ -1.16
CUE5YOR042W TY1B-MR2Q04670 1755 aaKnown RBP7.78□□□□□ -1.16
CUE5YOR042W TY1B-LR1Q12088 1755 aaKnown RBP7.78□□□□□ -1.16
CUE5YOR042W TY1B-NL1Q12112 1755 aa7.78□□□□□ -1.16
CUE5YOR042W TY1B-GR1Q12141 1755 aa7.78□□□□□ -1.16
CUE5YOR042W TY1B-BLQ12490 1755 aa7.78□□□□□ -1.16
CUE5YOR042W EDS1P38073 919 aa7.77□□□□□ -1.17
CUE5YOR042W IFH1P39520 1085 aa7.76□□□□□ -1.17
CUE5YOR042W NOP53Q12080 455 aaKnown RBP7.76□□□□□ -1.17
CUE5YOR042W YTA7P40340 1379 aa7.75□□□□□ -1.17
CUE5YOR042W NTE1Q04958 1679 aa7.75□□□□□ -1.17
CUE5YOR042W SPP41P38904 1435 aa7.74□□□□□ -1.17
CUE5YOR042W VTH1P40438 1549 aa7.73□□□□□ -1.17
CUE5YOR042W VTH2P40890 1549 aa7.73□□□□□ -1.17
CUE5YOR042W PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
CUE5YOR042W MLP2P40457 1679 aa7.72□□□□□ -1.17
CUE5YOR042W VPS70P47161 811 aa7.71□□□□□ -1.18
CUE5YOR042W YPR148CQ06523 435 aa7.71□□□□□ -1.18
CUE5YOR042W RPO21P04050 1733 aaKnown RBP7.7□□□□□ -1.18
CUE5YOR042W SAM3Q08986 587 aa7.7□□□□□ -1.18
CUE5YOR042W UBP9P39967 754 aa7.69□□□□□ -1.18
CUE5YOR042W WSC3Q12215 556 aa7.68□□□□□ -1.18
CUE5YOR042W TSC11P40061 1430 aa7.68□□□□□ -1.18
CUE5YOR042W TRM732Q03496 1420 aa7.67□□□□□ -1.18
CUE5YOR042W CKB1P43639 278 aa7.66□□□□□ -1.18
CUE5YOR042W ATH1P48016 1211 aa7.66□□□□□ -1.18
CUE5YOR042W GRE2Q12068 342 aaKnown RBP7.66□□□□□ -1.18
CUE5YOR042W GYP5Q12344 894 aa7.66□□□□□ -1.18
CUE5YOR042W SNQ2P32568 1501 aaKnown RBP7.66□□□□□ -1.18
CUE5YOR042W YOL036WQ08206 761 aa7.65□□□□□ -1.18
CUE5YOR042W ULS1Q08562 1619 aa7.65□□□□□ -1.18
CUE5YOR042W YBL029C-AQ3E756 94 aa7.65□□□□□ -1.18
CUE5YOR042W YRF1-1P0CX20 1796 aa7.64□□□□□ -1.19
CUE5YOR042W YRF1-5P0CX21 1796 aa7.64□□□□□ -1.19
CUE5YOR042W YRF1-8P0CX22 1796 aa7.64□□□□□ -1.19
CUE5YOR042W MET5P47169 1442 aa7.64□□□□□ -1.19
CUE5YOR042W SET4P42948 560 aa7.64□□□□□ -1.19
CUE5YOR042W GUT1P32190 709 aa7.63□□□□□ -1.19
CUE5YOR042W MSB4Q12317 492 aa7.62□□□□□ -1.19
CUE5YOR042W PDR15Q04182 1529 aaKnown RBP7.61□□□□□ -1.19
CUE5YOR042W ABP1P15891 592 aaKnown RBP7.6□□□□□ -1.19
CUE5YOR042W VNX1P42839 908 aa7.6□□□□□ -1.19
CUE5YOR042W NUP159P40477 1460 aa7.6□□□□□ -1.19
CUE5YOR042W SPB4P25808 606 aaPredicted RBP7.58□□□□□ -1.2
CUE5YOR042W DCW1P36091 449 aa7.58□□□□□ -1.2
CUE5YOR042W SNT2P53127 1403 aa7.57□□□□□ -1.2
CUE5YOR042W HTA1P04911 132 aaKnown RBP7.56□□□□□ -1.2
CUE5YOR042W HTA2P04912 132 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms