RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	ATF2	P53296	535 aa		3.01	□□□□□ -1.93
CTR9	YOL145C	MAK21	Q12176	1025 aa	Known RBP	3.01	□□□□□ -1.93
CTR9	YOL145C	PKC1	P24583	1151 aa		3.01	□□□□□ -1.93
CTR9	YOL145C	TFB3	Q03290	321 aa		3	□□□□□ -1.93
CTR9	YOL145C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
CTR9	YOL145C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
CTR9	YOL145C	YAP5	P40574	245 aa		2.99	□□□□□ -1.93
CTR9	YOL145C	ATH1	P48016	1211 aa		2.99	□□□□□ -1.93
CTR9	YOL145C	YGR273C	P53329	174 aa		2.99	□□□□□ -1.93
CTR9	YOL145C	GRE2	Q12068	342 aa	Known RBP	2.99	□□□□□ -1.93
CTR9	YOL145C	KTR1	P27810	393 aa	Known RBP	2.98	□□□□□ -1.93
CTR9	YOL145C	GUT1	P32190	709 aa		2.98	□□□□□ -1.93
CTR9	YOL145C	ILV3	P39522	585 aa	Known RBP	2.98	□□□□□ -1.93
CTR9	YOL145C	KEX1	P09620	729 aa		2.98	□□□□□ -1.93
CTR9	YOL145C	NST1	P53935	1240 aa		2.98	□□□□□ -1.93
CTR9	YOL145C	HPC2	Q01448	625 aa		2.97	□□□□□ -1.93
CTR9	YOL145C	SAM3	Q08986	587 aa		2.97	□□□□□ -1.93
CTR9	YOL145C	TIF4632	P39936	914 aa	Known RBP	2.97	□□□□□ -1.93
CTR9	YOL145C	GLN1	P32288	370 aa	Known RBP	2.96	□□□□□ -1.94
CTR9	YOL145C	RAD54	P32863	898 aa		2.96	□□□□□ -1.94
CTR9	YOL145C	TYW1	Q08960	810 aa	Known RBP	2.96	□□□□□ -1.94
CTR9	YOL145C	ORC6	P38826	435 aa		2.96	□□□□□ -1.94
CTR9	YOL145C	TGL3	P40308	642 aa		2.96	□□□□□ -1.94
CTR9	YOL145C	CSN12	P47130	423 aa		2.95	□□□□□ -1.94
CTR9	YOL145C	GYP5	Q12344	894 aa		2.95	□□□□□ -1.94
CTR9	YOL145C	DCW1	P36091	449 aa		2.95	□□□□□ -1.94
CTR9	YOL145C	ATG32	P40458	529 aa		2.95	□□□□□ -1.94
CTR9	YOL145C	PSE1	P32337	1089 aa	Known RBP	2.94	□□□□□ -1.94
CTR9	YOL145C	KIC1	P38692	1080 aa		2.94	□□□□□ -1.94
CTR9	YOL145C	BIM1	P40013	344 aa		2.94	□□□□□ -1.94
CTR9	YOL145C	YJL007C	P47080	104 aa		2.94	□□□□□ -1.94
CTR9	YOL145C	ERG12	P07277	443 aa		2.94	□□□□□ -1.94
CTR9	YOL145C	SET4	P42948	560 aa		2.93	□□□□□ -1.94
CTR9	YOL145C	RGR1	P19263	1082 aa		2.93	□□□□□ -1.94
CTR9	YOL145C	YOL036W	Q08206	761 aa		2.93	□□□□□ -1.94
CTR9	YOL145C	MST1	P07236	462 aa		2.93	□□□□□ -1.94
CTR9	YOL145C	HGH1	P48362	394 aa	Known RBP	2.93	□□□□□ -1.94
CTR9	YOL145C	SUB2	Q07478	446 aa	Known RBP	2.93	□□□□□ -1.94
CTR9	YOL145C	BRL1	P38770	471 aa		2.92	□□□□□ -1.94
CTR9	YOL145C	SCJ1	P25303	377 aa		2.92	□□□□□ -1.94
CTR9	YOL145C	TEA1	P47988	759 aa		2.92	□□□□□ -1.94
CTR9	YOL145C	MVP1	P40959	511 aa	Known RBP	2.91	□□□□□ -1.94
CTR9	YOL145C	NIS1	P53939	407 aa		2.91	□□□□□ -1.94
CTR9	YOL145C	BIO2	P32451	375 aa		2.91	□□□□□ -1.94
CTR9	YOL145C	SSA2	P10592	639 aa	Known RBP	2.91	□□□□□ -1.94
CTR9	YOL145C	GAP1	P19145	602 aa	Predicted RBP	2.9	□□□□□ -1.94
CTR9	YOL145C	SLI15	P38283	698 aa		2.9	□□□□□ -1.94
CTR9	YOL145C	YML020W	Q03722	664 aa		2.9	□□□□□ -1.94
CTR9	YOL145C	MPH3	P0CE00	602 aa		2.9	□□□□□ -1.95
CTR9	YOL145C	TIF1	P10081	395 aa	Known RBP	2.9	□□□□□ -1.95
CTR9	YOL145C	FPK1	P53739	893 aa		2.9	□□□□□ -1.95
CTR9	YOL145C	CDC73	Q06697	393 aa		2.9	□□□□□ -1.95
CTR9	YOL145C	ESS1	P22696	170 aa		2.89	□□□□□ -1.95
CTR9	YOL145C	YJU3	P28321	313 aa		2.89	□□□□□ -1.95
CTR9	YOL145C	GTT3	P39996	337 aa		2.89	□□□□□ -1.95
CTR9	YOL145C	YPR109W	Q06104	294 aa		2.89	□□□□□ -1.95
CTR9	YOL145C	AI4	P03878	556 aa		2.89	□□□□□ -1.95
CTR9	YOL145C	HTA1	P04911	132 aa	Known RBP	2.88	□□□□□ -1.95
CTR9	YOL145C	HTA2	P04912	132 aa		2.88	□□□□□ -1.95
CTR9	YOL145C	CPS1	P27614	576 aa		2.88	□□□□□ -1.95
CTR9	YOL145C	DAN4	P47179	1161 aa		2.88	□□□□□ -1.95
CTR9	YOL145C	SSA1	P10591	642 aa	Known RBP	2.88	□□□□□ -1.95
CTR9	YOL145C	YBL036C	P38197	257 aa		2.88	□□□□□ -1.95
CTR9	YOL145C	YEL023C	P39992	682 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	YNL108C	P53929	270 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	YPR204W	Q08995	1032 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	RAD59	Q12223	238 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	HST2	P53686	357 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	PKH3	Q03306	898 aa	Predicted RBP	2.87	□□□□□ -1.95
CTR9	YOL145C	NOP8	Q08287	484 aa	Predicted RBP	2.87	□□□□□ -1.95
CTR9	YOL145C	WSC3	Q12215	556 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	TTI1	P36097	1038 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	GEF1	P37020	779 aa		2.87	□□□□□ -1.95
CTR9	YOL145C	NOB1	Q08444	459 aa	Known RBP	2.87	□□□□□ -1.95
CTR9	YOL145C	SLX8	P40072	274 aa		2.86	□□□□□ -1.95
CTR9	YOL145C	MMP1	Q12372	583 aa		2.86	□□□□□ -1.95
CTR9	YOL145C	YDJ1	P25491	409 aa	Known RBP	2.86	□□□□□ -1.95
CTR9	YOL145C	YMR196W	Q04336	1088 aa		2.86	□□□□□ -1.95
CTR9	YOL145C	YML083C	Q04526	418 aa		2.86	□□□□□ -1.95
CTR9	YOL145C	SIT4	P20604	311 aa		2.85	□□□□□ -1.95
CTR9	YOL145C	RTG2	P32608	588 aa	Known RBP	2.85	□□□□□ -1.95
CTR9	YOL145C	TUM1	Q08686	304 aa	Known RBP	2.85	□□□□□ -1.95
CTR9	YOL145C	MID1	P41821	548 aa		2.85	□□□□□ -1.95
CTR9	YOL145C	CSC1	Q06538	782 aa		2.85	□□□□□ -1.95
CTR9	YOL145C	CLB5	P30283	435 aa		2.85	□□□□□ -1.95
CTR9	YOL145C	RPL34B	P40525	121 aa	Known RBP	2.85	□□□□□ -1.95
CTR9	YOL145C	TRP5	P00931	707 aa	Known RBP	2.84	□□□□□ -1.95
CTR9	YOL145C	SUP45	P12385	437 aa	Known RBP	2.84	□□□□□ -1.95
CTR9	YOL145C	ARG8	P18544	423 aa		2.84	□□□□□ -1.96
CTR9	YOL145C	SSA4	P22202	642 aa	Known RBP	2.84	□□□□□ -1.96
CTR9	YOL145C	RSC30	P38781	883 aa		2.84	□□□□□ -1.96
CTR9	YOL145C	MSB4	Q12317	492 aa		2.84	□□□□□ -1.96
CTR9	YOL145C	ENO1	P00924	437 aa	Known RBP	2.83	□□□□□ -1.96
CTR9	YOL145C	ENO2	P00925	437 aa	Known RBP	2.83	□□□□□ -1.96
CTR9	YOL145C	ERF2	Q06551	359 aa		2.83	□□□□□ -1.96
CTR9	YOL145C	PUP1	P25043	261 aa		2.83	□□□□□ -1.96
CTR9	YOL145C	PTC4	P38089	393 aa		2.83	□□□□□ -1.96
CTR9	YOL145C	TFB4	Q12004	338 aa		2.83	□□□□□ -1.96
CTR9	YOL145C	YRR1	Q12172	810 aa		2.83	□□□□□ -1.96
CTR9	YOL145C	YBL029C-A	Q3E756	94 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms