RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W DIT2P21595 489 aa6.54□□□□□ -1.36
TRM112YNR046W ATF2P53296 535 aa6.53□□□□□ -1.36
TRM112YNR046W SAM3Q08986 587 aa6.53□□□□□ -1.36
TRM112YNR046W GTT3P39996 337 aa6.52□□□□□ -1.37
TRM112YNR046W KIC1P38692 1080 aa6.51□□□□□ -1.37
TRM112YNR046W VHR2P40041 505 aa6.51□□□□□ -1.37
TRM112YNR046W GYP5Q12344 894 aa6.51□□□□□ -1.37
TRM112YNR046W MST1P07236 462 aa6.5□□□□□ -1.37
TRM112YNR046W UBP14P38237 781 aaKnown RBP6.5□□□□□ -1.37
TRM112YNR046W YGR273CP53329 174 aa6.48□□□□□ -1.37
TRM112YNR046W RLF2Q12495 606 aa6.48□□□□□ -1.37
TRM112YNR046W ABP1P15891 592 aaKnown RBP6.47□□□□□ -1.37
TRM112YNR046W YDR090CQ03193 310 aa6.47□□□□□ -1.37
TRM112YNR046W YLR326WQ06170 240 aaKnown RBP6.47□□□□□ -1.37
TRM112YNR046W RAD54P32863 898 aa6.45□□□□□ -1.38
TRM112YNR046W KEX1P09620 729 aa6.43□□□□□ -1.38
TRM112YNR046W DCW1P36091 449 aa6.43□□□□□ -1.38
TRM112YNR046W PSE1P32337 1089 aaKnown RBP6.42□□□□□ -1.38
TRM112YNR046W GUA1P38625 525 aaKnown RBP6.42□□□□□ -1.38
TRM112YNR046W HTA1P04911 132 aaKnown RBP6.41□□□□□ -1.38
TRM112YNR046W HTA2P04912 132 aa6.41□□□□□ -1.38
TRM112YNR046W SOL3P38858 249 aa6.41□□□□□ -1.38
TRM112YNR046W YOL036WQ08206 761 aa6.41□□□□□ -1.38
TRM112YNR046W BUD31P25337 157 aaPredicted RBP6.4□□□□□ -1.38
TRM112YNR046W PCS60P38137 543 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38 RIP-Chip
TRM112YNR046W SET4P42948 560 aa6.39□□□□□ -1.39
TRM112YNR046W HPC2Q01448 625 aa6.39□□□□□ -1.39
TRM112YNR046W MSB4Q12317 492 aa6.39□□□□□ -1.39
TRM112YNR046W AI4P03878 556 aa6.36□□□□□ -1.39
TRM112YNR046W MPH3P0CE00 602 aa6.36□□□□□ -1.39
TRM112YNR046W SSA2P10592 639 aaKnown RBP6.36□□□□□ -1.39
TRM112YNR046W RPP1BP10622 106 aaKnown RBP6.35□□□□□ -1.39
TRM112YNR046W EAP1P36041 632 aaKnown RBP6.34□□□□□ -1.39
TRM112YNR046W BRL1P38770 471 aa6.34□□□□□ -1.39
TRM112YNR046W TEA1P47988 759 aa6.34□□□□□ -1.39
TRM112YNR046W NST1P53935 1240 aa6.34□□□□□ -1.39
TRM112YNR046W ORC6P38826 435 aa6.33□□□□□ -1.4
TRM112YNR046W CSN12P47130 423 aa6.33□□□□□ -1.4
TRM112YNR046W CLB5P30283 435 aa6.32□□□□□ -1.4
TRM112YNR046W WSC3Q12215 556 aa6.32□□□□□ -1.4
TRM112YNR046W YEL023CP39992 682 aa6.31□□□□□ -1.4
TRM112YNR046W DAN4P47179 1161 aa6.31□□□□□ -1.4
TRM112YNR046W TFB3Q03290 321 aa6.31□□□□□ -1.4
TRM112YNR046W RGR1P19263 1082 aa6.3□□□□□ -1.4
TRM112YNR046W PTC4P38089 393 aa6.3□□□□□ -1.4
TRM112YNR046W CSC1Q06538 782 aa6.29□□□□□ -1.4
TRM112YNR046W MVP1P40959 511 aaKnown RBP6.28□□□□□ -1.4
TRM112YNR046W JIP4Q03361 876 aa6.28□□□□□ -1.4
TRM112YNR046W SLI15P38283 698 aa6.27□□□□□ -1.41
TRM112YNR046W ILV3P39522 585 aaKnown RBP6.27□□□□□ -1.41
TRM112YNR046W TRP5P00931 707 aaKnown RBP6.26□□□□□ -1.41
TRM112YNR046W PEX21P50091 288 aa6.25□□□□□ -1.41
TRM112YNR046W YMR196WQ04336 1088 aa6.24□□□□□ -1.41
TRM112YNR046W YPR109WQ06104 294 aa6.24□□□□□ -1.41
TRM112YNR046W TFB4Q12004 338 aa6.24□□□□□ -1.41
TRM112YNR046W GAP1P19145 602 aaPredicted RBP6.23□□□□□ -1.41
TRM112YNR046W VNX1P42839 908 aa6.23□□□□□ -1.41
TRM112YNR046W ULI1P43604 169 aa6.23□□□□□ -1.41
TRM112YNR046W PKC1P24583 1151 aa6.22□□□□□ -1.41
TRM112YNR046W GLN1P32288 370 aaKnown RBP6.22□□□□□ -1.41
TRM112YNR046W TIF11P38912 153 aaKnown RBP6.22□□□□□ -1.41
TRM112YNR046W UBP9P39967 754 aa6.21□□□□□ -1.42
TRM112YNR046W YJL007CP47080 104 aa6.21□□□□□ -1.42
TRM112YNR046W CDC73Q06697 393 aa6.21□□□□□ -1.42
TRM112YNR046W YBL029C-AQ3E756 94 aa6.21□□□□□ -1.42
TRM112YNR046W HST2P53686 357 aa6.2□□□□□ -1.42
TRM112YNR046W FPK1P53739 893 aa6.2□□□□□ -1.42
TRM112YNR046W NIS1P53939 407 aa6.2□□□□□ -1.42
TRM112YNR046W TYW1Q08960 810 aaKnown RBP6.2□□□□□ -1.42
TRM112YNR046W MMP1Q12372 583 aa6.2□□□□□ -1.42
TRM112YNR046W KTR1P27810 393 aaKnown RBP6.19□□□□□ -1.42
TRM112YNR046W SPP1Q03012 353 aa6.19□□□□□ -1.42
TRM112YNR046W YBL036CP38197 257 aa6.18□□□□□ -1.42
TRM112YNR046W BIM1P40013 344 aa6.18□□□□□ -1.42
TRM112YNR046W RPL34BP40525 121 aaKnown RBP6.18□□□□□ -1.42
TRM112YNR046W YNL035CP53962 389 aaKnown RBP6.18□□□□□ -1.42
TRM112YNR046W TUM1Q08686 304 aaKnown RBP6.18□□□□□ -1.42
TRM112YNR046W DPL1Q05567 589 aa6.17□□□□□ -1.42
TRM112YNR046W PML39Q03760 334 aa6.16□□□□□ -1.42
TRM112YNR046W IOC2Q12072 812 aa6.16□□□□□ -1.42
TRM112YNR046W SIT4P20604 311 aa6.15□□□□□ -1.42
TRM112YNR046W CSE4P36012 229 aa6.15□□□□□ -1.42
TRM112YNR046W PKH3Q03306 898 aaPredicted RBP6.15□□□□□ -1.42
TRM112YNR046W ATG32P40458 529 aa6.14□□□□□ -1.43
TRM112YNR046W MID1P41821 548 aa6.14□□□□□ -1.43
TRM112YNR046W TFG1P41895 735 aaPredicted RBP6.14□□□□□ -1.43
TRM112YNR046W PEX29Q03370 554 aa6.14□□□□□ -1.43
TRM112YNR046W ISU2Q12056 156 aa6.14□□□□□ -1.43
TRM112YNR046W RAD59Q12223 238 aa6.14□□□□□ -1.43
TRM112YNR046W ESS1P22696 170 aa6.13□□□□□ -1.43
TRM112YNR046W SCJ1P25303 377 aa6.13□□□□□ -1.43
TRM112YNR046W SEC61P32915 480 aa6.13□□□□□ -1.43
TRM112YNR046W MPC54Q08550 464 aa6.13□□□□□ -1.43
TRM112YNR046W YRR1Q12172 810 aa6.13□□□□□ -1.43
TRM112YNR046W ARG8P18544 423 aa6.11□□□□□ -1.43
TRM112YNR046W RTG1P32607 177 aa6.11□□□□□ -1.43
TRM112YNR046W TIF1P10081 395 aaKnown RBP6.1□□□□□ -1.43
TRM112YNR046W SLY41P22215 453 aa6.1□□□□□ -1.43
TRM112YNR046W RTF1P53064 558 aa6.1□□□□□ -1.43
TRM112YNR046W YNL115CP53925 644 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms