RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	RPO21	P04050	1733 aa	Known RBP	5.55	□□□□□ -1.52
SKP2	YNL311C	DOP1	Q03921	1698 aa		5.54	□□□□□ -1.52
SKP2	YNL311C	SPP41	P38904	1435 aa		5.53	□□□□□ -1.52
SKP2	YNL311C	PDR15	Q04182	1529 aa	Known RBP	5.53	□□□□□ -1.52
SKP2	YNL311C	SNT2	P53127	1403 aa		5.53	□□□□□ -1.52
SKP2	YNL311C	TY1B-JR2	P47100	1755 aa	Known RBP	5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-ER2	Q03619	1755 aa		5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-MR1	Q04214	1755 aa		5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-MR2	Q04670	1755 aa	Known RBP	5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-LR1	Q12088	1755 aa	Known RBP	5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-NL1	Q12112	1755 aa		5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-GR1	Q12141	1755 aa		5.52	□□□□□ -1.53
SKP2	YNL311C	TY1B-BL	Q12490	1755 aa		5.52	□□□□□ -1.53
SKP2	YNL311C	SMC4	Q12267	1418 aa		5.5	□□□□□ -1.53
SKP2	YNL311C	TSC11	P40061	1430 aa		5.5	□□□□□ -1.53
SKP2	YNL311C	VTH1	P40438	1549 aa		5.49	□□□□□ -1.53
SKP2	YNL311C	VTH2	P40890	1549 aa		5.49	□□□□□ -1.53
SKP2	YNL311C	ULS1	Q08562	1619 aa		5.49	□□□□□ -1.53
SKP2	YNL311C	DNF3	Q12674	1656 aa		5.46	□□□□□ -1.54
SKP2	YNL311C	MYO4	P32492	1471 aa		5.45	□□□□□ -1.54
SKP2	YNL311C	YOR1	P53049	1477 aa		5.44	□□□□□ -1.54
SKP2	YNL311C	POL1	P13382	1468 aa		5.43	□□□□□ -1.54
SKP2	YNL311C	PDR10	P51533	1564 aa		5.43	□□□□□ -1.54
SKP2	YNL311C	GDB1	Q06625	1536 aa		5.43	□□□□□ -1.54
SKP2	YNL311C	PDR12	Q02785	1511 aa		5.42	□□□□□ -1.54
SKP2	YNL311C	MET10	P39692	1035 aa		5.42	□□□□□ -1.54
SKP2	YNL311C	IQG1	Q12280	1495 aa		5.42	□□□□□ -1.54
SKP2	YNL311C	BUD3	P25558	1636 aa		5.41	□□□□□ -1.54
SKP2	YNL311C	ARO1	P08566	1588 aa	Known RBP	5.39	□□□□□ -1.55
SKP2	YNL311C	SNQ2	P32568	1501 aa	Known RBP	5.38	□□□□□ -1.55
SKP2	YNL311C	PRY3	P47033	881 aa		5.36	□□□□□ -1.55
SKP2	YNL311C	CHC1	P22137	1653 aa	Known RBP	5.35	□□□□□ -1.55
SKP2	YNL311C	STU1	P38198	1513 aa		5.33	□□□□□ -1.56
SKP2	YNL311C	BNR1	P40450	1375 aa		5.33	□□□□□ -1.56
SKP2	YNL311C	TY3B-G	Q99315	1547 aa		5.31	□□□□□ -1.56
SKP2	YNL311C	YTA7	P40340	1379 aa		5.31	□□□□□ -1.56
SKP2	YNL311C	GLN1	P32288	370 aa	Known RBP	5.31	□□□□□ -1.56
SKP2	YNL311C	MLP2	P40457	1679 aa		5.31	□□□□□ -1.56
SKP2	YNL311C	MAK10	Q02197	733 aa		5.3	□□□□□ -1.56
SKP2	YNL311C	STH1	P32597	1359 aa		5.3	□□□□□ -1.56
SKP2	YNL311C	YAP3	P38749	330 aa		5.28	□□□□□ -1.56
SKP2	YNL311C	AAD16	Q02895	342 aa		5.28	□□□□□ -1.56
SKP2	YNL311C	NUP157	P40064	1391 aa	Known RBP	5.27	□□□□□ -1.57
SKP2	YNL311C	PRI1	P10363	409 aa		5.27	□□□□□ -1.57
SKP2	YNL311C	YMR196W	Q04336	1088 aa		5.25	□□□□□ -1.57
SKP2	YNL311C	RTT106	P40161	455 aa		5.24	□□□□□ -1.57
SKP2	YNL311C	YAH1	Q12184	172 aa	Known RBP	5.24	□□□□□ -1.57
SKP2	YNL311C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.23	□□□□□ -1.57
SKP2	YNL311C	USO1	P25386	1790 aa		5.23	□□□□□ -1.57
SKP2	YNL311C	ISW2	Q08773	1120 aa		5.22	□□□□□ -1.57
SKP2	YNL311C	HAP1	P0CE41	1502 aa		5.21	□□□□□ -1.58
SKP2	YNL311C	URN1	Q06525	465 aa	Known RBP	5.18	□□□□□ -1.58
SKP2	YNL311C	YIL055C	P40523	627 aa	Known RBP	5.18	□□□□□ -1.58
SKP2	YNL311C	THI12	P42883	340 aa		5.17	□□□□□ -1.58
SKP2	YNL311C	THI5	P43534	340 aa		5.17	□□□□□ -1.58
SKP2	YNL311C	THI11	P47183	340 aa		5.17	□□□□□ -1.58
SKP2	YNL311C	THI13	Q07748	340 aa		5.17	□□□□□ -1.58
SKP2	YNL311C	YSP2	Q06681	1438 aa		5.17	□□□□□ -1.58
SKP2	YNL311C	RPG1	P38249	964 aa	Known RBP	5.13	□□□□□ -1.59
SKP2	YNL311C	YMR074C	Q04773	145 aa		5.13	□□□□□ -1.59
SKP2	YNL311C	YBT1	P32386	1661 aa		5.11	□□□□□ -1.59
SKP2	YNL311C	NUP188	P52593	1655 aa	Known RBP	5.11	□□□□□ -1.59
SKP2	YNL311C	SEC7	P11075	2009 aa	Known RBP	5.11	□□□□□ -1.59
SKP2	YNL311C	RRD1	P40454	393 aa	Known RBP	5.09	□□□□□ -1.59
SKP2	YNL311C	VMR1	P38735	1592 aa		5.09	□□□□□ -1.6
SKP2	YNL311C	IML1	P47170	1584 aa		5.08	□□□□□ -1.6
SKP2	YNL311C	SSA1	P10591	642 aa	Known RBP	5.07	□□□□□ -1.6
SKP2	YNL311C	DIP2	Q12220	943 aa	Predicted RBP	5.07	□□□□□ -1.6
SKP2	YNL311C	BCK1	Q01389	1478 aa		5.06	□□□□□ -1.6
SKP2	YNL311C	CAT8	P39113	1433 aa		5.05	□□□□□ -1.6
SKP2	YNL311C	HAA1	Q12753	694 aa	Known RBP	5.04	□□□□□ -1.6
SKP2	YNL311C	APP1	P53933	587 aa		5.03	□□□□□ -1.6
SKP2	YNL311C	PTP3	P40048	928 aa		5.02	□□□□□ -1.61
SKP2	YNL311C	BUD31	P25337	157 aa	Predicted RBP	5	□□□□□ -1.61
SKP2	YNL311C	PDR11	P40550	1411 aa		4.99	□□□□□ -1.61
SKP2	YNL311C	TSR3	Q12094	313 aa	Known RBP	4.99	□□□□□ -1.61
SKP2	YNL311C	IPL1	P38991	367 aa		4.98	□□□□□ -1.61
SKP2	YNL311C	EDE1	P34216	1381 aa		4.95	□□□□□ -1.62
SKP2	YNL311C	YCK3	P39962	524 aa		4.95	□□□□□ -1.62
SKP2	YNL311C	GTT3	P39996	337 aa		4.94	□□□□□ -1.62
SKP2	YNL311C	UBP1	P25037	809 aa		4.94	□□□□□ -1.62
SKP2	YNL311C	REB1	P21538	810 aa		4.93	□□□□□ -1.62
SKP2	YNL311C	IMH1	Q06704	911 aa	Known RBP	4.92	□□□□□ -1.62
SKP2	YNL311C	TAF7	Q05021	590 aa		4.92	□□□□□ -1.62
SKP2	YNL311C	YRF1-2	P40105	1681 aa		4.91	□□□□□ -1.62
SKP2	YNL311C	PDR5	P33302	1511 aa	Known RBP	4.91	□□□□□ -1.62
SKP2	YNL311C	GEA1	P47102	1408 aa	Predicted RBP	4.9	□□□□□ -1.62
SKP2	YNL311C	UGA2	P38067	497 aa		4.9	□□□□□ -1.63
SKP2	YNL311C	ENT1	Q12518	454 aa		4.89	□□□□□ -1.63
SKP2	YNL311C	ENV9	Q08651	330 aa		4.89	□□□□□ -1.63
SKP2	YNL311C	YBL086C	P38177	466 aa		4.88	□□□□□ -1.63
SKP2	YNL311C	CKB1	P43639	278 aa		4.88	□□□□□ -1.63
SKP2	YNL311C	CFT1	Q06632	1357 aa	Known RBP	4.86	□□□□□ -1.63
SKP2	YNL311C	TYS1	P36421	394 aa	Known RBP	4.85	□□□□□ -1.63
SKP2	YNL311C	MRPL32	P25348	183 aa		4.84	□□□□□ -1.64
SKP2	YNL311C	AVT3	P36062	692 aa		4.84	□□□□□ -1.64
SKP2	YNL311C	ALD2	P47771	506 aa		4.82	□□□□□ -1.64
SKP2	YNL311C	SRB8	P25648	1427 aa		4.81	□□□□□ -1.64
SKP2	YNL311C	IFH1	P39520	1085 aa		4.8	□□□□□ -1.64
SKP2	YNL311C	YNR029C	P53729	429 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms