RNA–Protein interactions for RNA: YNL216W

RAP1, Transcript of Essential DNA-binding transcription regulator that binds many loci, yeastyeast

Gene RAP1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAP1YNL216W SIN3P22579 1536 aa7.77□□□□□ -1.16
RAP1YNL216W DJP1P40564 432 aa7.77□□□□□ -1.17
RAP1YNL216W MDS3P53094 1487 aa7.77□□□□□ -1.17
RAP1YNL216W SLN1P39928 1220 aaPredicted RBP7.77□□□□□ -1.17
RAP1YNL216W MLP2P40457 1679 aa7.77□□□□□ -1.17
RAP1YNL216W ORC1P54784 914 aaPredicted RBP7.76□□□□□ -1.17
RAP1YNL216W CTR9P89105 1077 aa7.76□□□□□ -1.17
RAP1YNL216W SMC4Q12267 1418 aa7.76□□□□□ -1.17
RAP1YNL216W NAP1P25293 417 aaKnown RBP7.75□□□□□ -1.17
RAP1YNL216W RPN1P38764 993 aaKnown RBP7.75□□□□□ -1.17
RAP1YNL216W NOP53Q12080 455 aaKnown RBP7.75□□□□□ -1.17
RAP1YNL216W RLF2Q12495 606 aa7.75□□□□□ -1.17
RAP1YNL216W TSC11P40061 1430 aa7.75□□□□□ -1.17
RAP1YNL216W MMS1Q06211 1407 aa7.75□□□□□ -1.17
RAP1YNL216W OXP1P28273 1286 aa7.75□□□□□ -1.17
RAP1YNL216W NUG1P40010 520 aaKnown RBP7.72□□□□□ -1.17
RAP1YNL216W YIR014WP40570 242 aa7.72□□□□□ -1.17
RAP1YNL216W YPP1P46951 817 aa7.72□□□□□ -1.17
RAP1YNL216W RNA1P11745 407 aaKnown RBP7.71□□□□□ -1.17
RAP1YNL216W MHP1P43638 1398 aa7.71□□□□□ -1.18
RAP1YNL216W YCF1P39109 1515 aaKnown RBP7.71□□□□□ -1.18
RAP1YNL216W REB1P21538 810 aa7.71□□□□□ -1.18
RAP1YNL216W NOP58Q12499 511 aaKnown RBP7.7□□□□□ -1.18
RAP1YNL216W GEA1P47102 1408 aaPredicted RBP7.7□□□□□ -1.18
RAP1YNL216W SNQ2P32568 1501 aaKnown RBP7.7□□□□□ -1.18
RAP1YNL216W ESP1Q03018 1630 aa7.7□□□□□ -1.18
RAP1YNL216W RAD26P40352 1085 aa7.69□□□□□ -1.18
RAP1YNL216W MYO4P32492 1471 aa7.69□□□□□ -1.18
RAP1YNL216W YLR271WQ06152 274 aa7.69□□□□□ -1.18
RAP1YNL216W FPR4Q06205 392 aaPredicted RBP7.69□□□□□ -1.18
RAP1YNL216W PCT1P13259 424 aa7.68□□□□□ -1.18
RAP1YNL216W YAH1Q12184 172 aaKnown RBP7.68□□□□□ -1.18
RAP1YNL216W YPK9Q12697 1472 aa7.68□□□□□ -1.18
RAP1YNL216W NST1P53935 1240 aa7.68□□□□□ -1.18
RAP1YNL216W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
RAP1YNL216W KRI1P42846 591 aaKnown RBP7.66□□□□□ -1.18
RAP1YNL216W YOR1P53049 1477 aa7.65□□□□□ -1.18
RAP1YNL216W YRB30P53107 440 aaPredicted RBP7.65□□□□□ -1.18
RAP1YNL216W RVB2Q12464 471 aaKnown RBP7.65□□□□□ -1.18
RAP1YNL216W NOT3P06102 836 aaKnown RBP7.64□□□□□ -1.19
RAP1YNL216W KNS1P32350 737 aaPredicted RBP7.64□□□□□ -1.19
RAP1YNL216W DEF1P35732 738 aaKnown RBP7.64□□□□□ -1.19
RAP1YNL216W KIP3P53086 805 aaKnown RBP7.64□□□□□ -1.19
RAP1YNL216W MSP1P28737 362 aa7.63□□□□□ -1.19
RAP1YNL216W ARL1P38116 183 aaKnown RBP7.62□□□□□ -1.19
RAP1YNL216W IRC20Q06554 1556 aa7.62□□□□□ -1.19
RAP1YNL216W ATG2P53855 1592 aa7.61□□□□□ -1.19
RAP1YNL216W RKR1Q04781 1562 aa7.61□□□□□ -1.19
RAP1YNL216W SWE1P32944 819 aa7.61□□□□□ -1.19
RAP1YNL216W VPS24P36095 224 aaKnown RBP7.61□□□□□ -1.19
RAP1YNL216W NUP159P40477 1460 aa7.61□□□□□ -1.19
RAP1YNL216W PDS5Q04264 1277 aa7.6□□□□□ -1.19
RAP1YNL216W CDC45Q08032 650 aa7.6□□□□□ -1.19
RAP1YNL216W PDR15Q04182 1529 aaKnown RBP7.6□□□□□ -1.19
RAP1YNL216W EDE1P34216 1381 aa7.59□□□□□ -1.19
RAP1YNL216W SPC110P32380 944 aa7.59□□□□□ -1.19
RAP1YNL216W VPS27P40343 622 aaKnown RBP7.59□□□□□ -1.19
RAP1YNL216W SMC3P47037 1230 aa7.58□□□□□ -1.2
RAP1YNL216W VPS15P22219 1454 aa7.57□□□□□ -1.2
RAP1YNL216W RIX1P38883 763 aaPredicted RBP7.57□□□□□ -1.2
RAP1YNL216W MGA2P40578 1113 aa7.57□□□□□ -1.2
RAP1YNL216W CKB1P43639 278 aa7.57□□□□□ -1.2
RAP1YNL216W CLB5P30283 435 aa7.57□□□□□ -1.2
RAP1YNL216W NOP7P53261 605 aaKnown RBP7.56□□□□□ -1.2
RAP1YNL216W SPT2P06843 333 aaPredicted RBP7.54□□□□□ -1.2
RAP1YNL216W PRI1P10363 409 aa7.54□□□□□ -1.2
RAP1YNL216W DNF1P32660 1571 aa7.54□□□□□ -1.2
RAP1YNL216W TEA1P47988 759 aa7.53□□□□□ -1.2
RAP1YNL216W TY3B-GQ99315 1547 aa7.53□□□□□ -1.2
RAP1YNL216W NMD2P38798 1089 aaKnown RBP7.53□□□□□ -1.2
RAP1YNL216W CST9Q06032 482 aa7.53□□□□□ -1.2
RAP1YNL216W GCN2P15442 1659 aa7.52□□□□□ -1.2
RAP1YNL216W RPP0P05317 312 aaKnown RBP7.52□□□□□ -1.21
RAP1YNL216W TPM2P40414 161 aa7.51□□□□□ -1.21
RAP1YNL216W TRM3Q07527 1436 aa7.5□□□□□ -1.21
RAP1YNL216W RAD2P07276 1031 aa7.5□□□□□ -1.21
RAP1YNL216W DSN1P40568 576 aa7.5□□□□□ -1.21
RAP1YNL216W PSH1Q12161 406 aa7.5□□□□□ -1.21
RAP1YNL216W GEA2P39993 1459 aaKnown RBP7.49□□□□□ -1.21
RAP1YNL216W NUP157P40064 1391 aaKnown RBP7.49□□□□□ -1.21
RAP1YNL216W YDL144CQ07589 356 aa7.49□□□□□ -1.21
RAP1YNL216W SUI2P20459 304 aaKnown RBP7.48□□□□□ -1.21
RAP1YNL216W MSH3P25336 1018 aa7.47□□□□□ -1.21
RAP1YNL216W SIC1P38634 284 aa7.47□□□□□ -1.21
RAP1YNL216W LSP1Q12230 341 aaKnown RBP7.47□□□□□ -1.21
RAP1YNL216W ULS1Q08562 1619 aa7.47□□□□□ -1.21
RAP1YNL216W MED8P38304 223 aa7.46□□□□□ -1.21
RAP1YNL216W RSC1P53236 928 aa7.46□□□□□ -1.21
RAP1YNL216W LCD1Q04377 747 aa7.46□□□□□ -1.21
RAP1YNL216W BMS1Q08965 1183 aaKnown RBP7.46□□□□□ -1.21
RAP1YNL216W YIL055CP40523 627 aaKnown RBP7.46□□□□□ -1.22
RAP1YNL216W MDG1P53885 366 aa7.46□□□□□ -1.22
RAP1YNL216W ESC1Q03661 1658 aaKnown RBP7.45□□□□□ -1.22
RAP1YNL216W SPB4P25808 606 aaPredicted RBP7.45□□□□□ -1.22
RAP1YNL216W DOS2P54858 310 aa7.45□□□□□ -1.22
RAP1YNL216W ECM1P39715 212 aa7.45□□□□□ -1.22
RAP1YNL216W PDR5P33302 1511 aaKnown RBP7.45□□□□□ -1.22
RAP1YNL216W MCM2P29469 868 aa7.44□□□□□ -1.22
RAP1YNL216W ESC2Q06340 456 aa7.44□□□□□ -1.22
RAP1YNL216W CLB1P24868 471 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms