RNA–Protein interactions for RNA: YNL004W

HRB1, Transcript of Poly(A+) RNA-binding protein, yeastyeast

Gene HRB1, Length 1,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRB1YNL004W TY1B-GR1Q12141 1755 aa11.18□□□□□ -0.62
HRB1YNL004W TY1B-BLQ12490 1755 aa11.18□□□□□ -0.62
HRB1YNL004W LTE1P07866 1435 aa11.18□□□□□ -0.62
HRB1YNL004W IFH1P39520 1085 aa11.17□□□□□ -0.62
HRB1YNL004W MET10P39692 1035 aa11.17□□□□□ -0.62
HRB1YNL004W SNT2P53127 1403 aa11.17□□□□□ -0.62
HRB1YNL004W NTE1Q04958 1679 aa11.12□□□□□ -0.63
HRB1YNL004W RPO21P04050 1733 aaKnown RBP11.1□□□□□ -0.63
HRB1YNL004W VPS15P22219 1454 aa11.09□□□□□ -0.63
HRB1YNL004W GEA2P39993 1459 aaKnown RBP11.09□□□□□ -0.63
HRB1YNL004W YRF1-1P0CX20 1796 aa11.08□□□□□ -0.64
HRB1YNL004W YRF1-5P0CX21 1796 aa11.08□□□□□ -0.64
HRB1YNL004W YRF1-8P0CX22 1796 aa11.08□□□□□ -0.64
HRB1YNL004W ITT1Q04638 464 aa11.08□□□□□ -0.64
HRB1YNL004W PDR15Q04182 1529 aaKnown RBP11.06□□□□□ -0.64
HRB1YNL004W MLP2P40457 1679 aa11.03□□□□□ -0.64
HRB1YNL004W ULS1Q08562 1619 aa11.02□□□□□ -0.65
HRB1YNL004W DRS2P39524 1355 aa11.01□□□□□ -0.65
HRB1YNL004W GEA1P47102 1408 aaPredicted RBP10.98□□□□□ -0.65
HRB1YNL004W NUP157P40064 1391 aaKnown RBP10.98□□□□□ -0.65
HRB1YNL004W PDR12Q02785 1511 aa10.95□□□□□ -0.66
HRB1YNL004W BFR2Q06631 534 aaKnown RBP10.93□□□□□ -0.66
HRB1YNL004W SPO14P36126 1683 aa10.93□□□□□ -0.66
HRB1YNL004W BNI1P41832 1953 aa10.92□□□□□ -0.66
HRB1YNL004W CKB1P43639 278 aa10.9□□□□□ -0.66
HRB1YNL004W MMS1Q06211 1407 aa10.9□□□□□ -0.66
HRB1YNL004W IRC20Q06554 1556 aa10.9□□□□□ -0.66
HRB1YNL004W NUP170P38181 1502 aa10.89□□□□□ -0.67
HRB1YNL004W CAT8P39113 1433 aa10.88□□□□□ -0.67
HRB1YNL004W GDB1Q06625 1536 aa10.88□□□□□ -0.67
HRB1YNL004W IQG1Q12280 1495 aa10.87□□□□□ -0.67
HRB1YNL004W PDR10P51533 1564 aa10.85□□□□□ -0.67
HRB1YNL004W ABP1P15891 592 aaKnown RBP10.85□□□□□ -0.67
HRB1YNL004W TY3B-GQ99315 1547 aa10.81□□□□□ -0.68
HRB1YNL004W BUD3P25558 1636 aa10.78□□□□□ -0.68
HRB1YNL004W IKI3Q06706 1349 aaKnown RBP10.75□□□□□ -0.69
HRB1YNL004W TRM3Q07527 1436 aa10.74□□□□□ -0.69
HRB1YNL004W YSP2Q06681 1438 aa10.73□□□□□ -0.69
HRB1YNL004W YBT1P32386 1661 aa10.72□□□□□ -0.69
HRB1YNL004W ARO1P08566 1588 aaKnown RBP10.72□□□□□ -0.69
HRB1YNL004W BNR1P40450 1375 aa10.71□□□□□ -0.69
HRB1YNL004W MIF2P35201 549 aa10.7□□□□□ -0.7
HRB1YNL004W BUD21Q08492 214 aaPredicted RBP10.7□□□□□ -0.7
HRB1YNL004W SRB8P25648 1427 aa10.69□□□□□ -0.7
HRB1YNL004W DOP1Q03921 1698 aa10.67□□□□□ -0.7
HRB1YNL004W SSM4P40318 1319 aa10.64□□□□□ -0.71
HRB1YNL004W SEC7P11075 2009 aaKnown RBP10.62□□□□□ -0.71
HRB1YNL004W DNF2Q12675 1612 aa10.62□□□□□ -0.71
HRB1YNL004W URN1Q06525 465 aaKnown RBP10.58□□□□□ -0.72
HRB1YNL004W YAP3P38749 330 aa10.57□□□□□ -0.72
HRB1YNL004W DIP2Q12220 943 aaPredicted RBP10.56□□□□□ -0.72
HRB1YNL004W CHC1P22137 1653 aaKnown RBP10.54□□□□□ -0.72
HRB1YNL004W AVT3P36062 692 aa10.48□□□□□ -0.73
HRB1YNL004W IPL1P38991 367 aa10.47□□□□□ -0.73
HRB1YNL004W YOR093CQ12275 1648 aa10.45□□□□□ -0.74
HRB1YNL004W TFA1P36100 482 aa10.45□□□□□ -0.74
HRB1YNL004W TYS1P36421 394 aaKnown RBP10.43□□□□□ -0.74
HRB1YNL004W MAK10Q02197 733 aa10.4□□□□□ -0.74
HRB1YNL004W YFR006WP43590 535 aa10.39□□□□□ -0.75
HRB1YNL004W PAF1P38351 445 aa10.38□□□□□ -0.75
HRB1YNL004W DNF3Q12674 1656 aa10.33□□□□□ -0.76
HRB1YNL004W PDR5P33302 1511 aaKnown RBP10.33□□□□□ -0.76
HRB1YNL004W NUP188P52593 1655 aaKnown RBP10.33□□□□□ -0.76
HRB1YNL004W NOP7P53261 605 aaKnown RBP10.31□□□□□ -0.76
HRB1YNL004W GCN2P15442 1659 aa10.31□□□□□ -0.76
HRB1YNL004W VMR1P38735 1592 aa10.3□□□□□ -0.76
HRB1YNL004W IML1P47170 1584 aa10.29□□□□□ -0.76
HRB1YNL004W PDR11P40550 1411 aa10.29□□□□□ -0.76
HRB1YNL004W RAV1P47104 1357 aa10.22□□□□□ -0.77
HRB1YNL004W MRX12P47084 519 aa10.2□□□□□ -0.78
HRB1YNL004W RTC1Q08281 1341 aa10.2□□□□□ -0.78
HRB1YNL004W HAP1P0CE41 1502 aa10.19□□□□□ -0.78
HRB1YNL004W YMR196WQ04336 1088 aa10.18□□□□□ -0.78
HRB1YNL004W RIA1P53893 1110 aa10.15□□□□□ -0.78
HRB1YNL004W ALD4P46367 519 aaKnown RBP10.14□□□□□ -0.79
HRB1YNL004W CAB1Q04430 367 aa10.14□□□□□ -0.79
HRB1YNL004W KRE5P22023 1365 aa10.14□□□□□ -0.79
HRB1YNL004W TAF5P38129 798 aa10.14□□□□□ -0.79
HRB1YNL004W THI12P42883 340 aa10.14□□□□□ -0.79
HRB1YNL004W THI5P43534 340 aa10.14□□□□□ -0.79
HRB1YNL004W THI11P47183 340 aa10.14□□□□□ -0.79
HRB1YNL004W THI13Q07748 340 aa10.14□□□□□ -0.79
HRB1YNL004W RAD9P14737 1309 aa10.12□□□□□ -0.79
HRB1YNL004W ESL2P36168 1195 aa10.12□□□□□ -0.79
HRB1YNL004W NAP1P25293 417 aaKnown RBP10.07□□□□□ -0.8
HRB1YNL004W BCK1Q01389 1478 aa10.07□□□□□ -0.8
HRB1YNL004W YNR029CP53729 429 aaKnown RBP10.06□□□□□ -0.8
HRB1YNL004W ORC1P54784 914 aaPredicted RBP10.06□□□□□ -0.8
HRB1YNL004W USO1P25386 1790 aa10.06□□□□□ -0.8
HRB1YNL004W TAF8Q03750 510 aa10.05□□□□□ -0.8
HRB1YNL004W CFT1Q06632 1357 aaKnown RBP10.05□□□□□ -0.8
HRB1YNL004W TY1B-NL2Q99337 1749 aaKnown RBP10.04□□□□□ -0.8
HRB1YNL004W KIP3P53086 805 aaKnown RBP10.01□□□□□ -0.81
HRB1YNL004W NUP192P47054 1683 aa10□□□□□ -0.81
HRB1YNL004W SPE2P21182 396 aa9.97□□□□□ -0.81
HRB1YNL004W RCM1P53972 490 aa9.95□□□□□ -0.82
HRB1YNL004W POL5P39985 1022 aaKnown RBP9.93□□□□□ -0.82
HRB1YNL004W CHZ1P40019 153 aaPredicted RBP9.91□□□□□ -0.82
HRB1YNL004W ISW2Q08773 1120 aa9.91□□□□□ -0.82
HRB1YNL004W CPS1P27614 576 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms