RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W TY1B-PR2P0C2J0 1756 aa4.05□□□□□ -1.76
UBP15YMR304W TY1B-PR3P0C2J1 1755 aaKnown RBP4.05□□□□□ -1.76
UBP15YMR304W TY1B-JR1P47098 1755 aa4.05□□□□□ -1.76
UBP15YMR304W TY1B-ML2Q03434 1755 aaKnown RBP4.05□□□□□ -1.76
UBP15YMR304W TY1B-ER1Q03612 1755 aa4.05□□□□□ -1.76
UBP15YMR304W TY1B-ML1Q04711 1755 aaKnown RBP4.05□□□□□ -1.76
UBP15YMR304W TY1B-GR2Q12269 1755 aa4.05□□□□□ -1.76
UBP15YMR304W TY1B-OLQ12273 1755 aa4.05□□□□□ -1.76
UBP15YMR304W TY1B-PLQ12414 1755 aaKnown RBP4.05□□□□□ -1.76
UBP15YMR304W NUP159P40477 1460 aa4.04□□□□□ -1.76
UBP15YMR304W YRF1-1P0CX20 1796 aa4.03□□□□□ -1.76
UBP15YMR304W YRF1-5P0CX21 1796 aa4.03□□□□□ -1.76
UBP15YMR304W YRF1-8P0CX22 1796 aa4.03□□□□□ -1.76
UBP15YMR304W MMS22Q06164 1454 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-LR1P0C2J3 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-FP0CX63 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-GR2P0CX64 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-CP25384 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-DR2Q03494 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY1B-DR1Q03855 1755 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-DR3Q07791 1770 aaKnown RBP4.03□□□□□ -1.76
UBP15YMR304W TY2B-OR1Q12113 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-DR1Q12472 1770 aa4.03□□□□□ -1.76
UBP15YMR304W TY2B-OR2Q12501 1770 aa4.03□□□□□ -1.76
UBP15YMR304W SCY1P53009 804 aa4.03□□□□□ -1.76
UBP15YMR304W RPO21P04050 1733 aaKnown RBP4.03□□□□□ -1.76
UBP15YMR304W SKI3P17883 1432 aaKnown RBP4.03□□□□□ -1.76
UBP15YMR304W TOP2P06786 1428 aaKnown RBP4.02□□□□□ -1.77
UBP15YMR304W TY1B-NL2Q99337 1749 aaKnown RBP4.02□□□□□ -1.77
UBP15YMR304W URN1Q06525 465 aaKnown RBP4.01□□□□□ -1.77
UBP15YMR304W DNF3Q12674 1656 aa4.01□□□□□ -1.77
UBP15YMR304W EDE1P34216 1381 aa4.01□□□□□ -1.77
UBP15YMR304W PDR12Q02785 1511 aa3.99□□□□□ -1.77
UBP15YMR304W TFA1P36100 482 aa3.99□□□□□ -1.77
UBP15YMR304W PTP3P40048 928 aa3.99□□□□□ -1.77
UBP15YMR304W YIL055CP40523 627 aaKnown RBP3.98□□□□□ -1.77
UBP15YMR304W SSN2P38931 1420 aa3.98□□□□□ -1.77
UBP15YMR304W BCH2P36122 765 aa3.98□□□□□ -1.77
UBP15YMR304W GDB1Q06625 1536 aa3.97□□□□□ -1.77
UBP15YMR304W TY2B-BQ12491 1770 aa3.97□□□□□ -1.77
UBP15YMR304W SLX5P32828 619 aaKnown RBP3.97□□□□□ -1.77
UBP15YMR304W SMC4Q12267 1418 aa3.96□□□□□ -1.77
UBP15YMR304W OXP1P28273 1286 aa3.95□□□□□ -1.78
UBP15YMR304W TIF4632P39936 914 aaKnown RBP3.94□□□□□ -1.78
UBP15YMR304W YAH1Q12184 172 aaKnown RBP3.94□□□□□ -1.78
UBP15YMR304W MYO4P32492 1471 aa3.94□□□□□ -1.78
UBP15YMR304W CHC1P22137 1653 aaKnown RBP3.93□□□□□ -1.78
UBP15YMR304W ULS1Q08562 1619 aa3.93□□□□□ -1.78
UBP15YMR304W STU1P38198 1513 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-JR2P47100 1755 aaKnown RBP3.92□□□□□ -1.78
UBP15YMR304W TY1B-ER2Q03619 1755 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-MR1Q04214 1755 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-MR2Q04670 1755 aaKnown RBP3.92□□□□□ -1.78
UBP15YMR304W TY1B-LR1Q12088 1755 aaKnown RBP3.92□□□□□ -1.78
UBP15YMR304W TY1B-NL1Q12112 1755 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-GR1Q12141 1755 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-BLQ12490 1755 aa3.92□□□□□ -1.78
UBP15YMR304W TY1B-DR3Q99231 1755 aa3.92□□□□□ -1.78
UBP15YMR304W IQG1Q12280 1495 aa3.9□□□□□ -1.78
UBP15YMR304W TY3B-GQ99315 1547 aa3.9□□□□□ -1.78
UBP15YMR304W YMR196WQ04336 1088 aa3.89□□□□□ -1.79
UBP15YMR304W EPS1P40557 701 aa3.89□□□□□ -1.79
UBP15YMR304W BNR1P40450 1375 aa3.88□□□□□ -1.79
UBP15YMR304W VTH1P40438 1549 aa3.88□□□□□ -1.79
UBP15YMR304W VTH2P40890 1549 aa3.88□□□□□ -1.79
UBP15YMR304W SPP41P38904 1435 aa3.87□□□□□ -1.79
UBP15YMR304W RSM7P47150 247 aa3.86□□□□□ -1.79
UBP15YMR304W PDR10P51533 1564 aa3.86□□□□□ -1.79
UBP15YMR304W TSC11P40061 1430 aa3.86□□□□□ -1.79
UBP15YMR304W BDF1P35817 686 aa3.86□□□□□ -1.79
UBP15YMR304W BBC1P47068 1157 aa3.86□□□□□ -1.79
UBP15YMR304W ARO1P08566 1588 aaKnown RBP3.86□□□□□ -1.79
UBP15YMR304W MLP2P40457 1679 aa3.86□□□□□ -1.79
UBP15YMR304W TGL3P40308 642 aa3.85□□□□□ -1.79
UBP15YMR304W YOR1P53049 1477 aa3.83□□□□□ -1.8
UBP15YMR304W AI2P03876 854 aa3.83□□□□□ -1.8
UBP15YMR304W POL1P13382 1468 aa3.83□□□□□ -1.8
UBP15YMR304W BUD31P25337 157 aaPredicted RBP3.82□□□□□ -1.8
UBP15YMR304W SNQ2P32568 1501 aaKnown RBP3.81□□□□□ -1.8
UBP15YMR304W GTT3P39996 337 aa3.81□□□□□ -1.8
UBP15YMR304W IML1P47170 1584 aa3.81□□□□□ -1.8
UBP15YMR304W GLN1P32288 370 aaKnown RBP3.8□□□□□ -1.8
UBP15YMR304W MET10P39692 1035 aa3.79□□□□□ -1.8
UBP15YMR304W YLR271WQ06152 274 aa3.79□□□□□ -1.8
UBP15YMR304W UBP9P39967 754 aa3.79□□□□□ -1.8
UBP15YMR304W STH1P32597 1359 aa3.79□□□□□ -1.8
UBP15YMR304W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
UBP15YMR304W BCK1Q01389 1478 aa3.78□□□□□ -1.8
UBP15YMR304W SSP1P38871 571 aa3.78□□□□□ -1.8
UBP15YMR304W VMR1P38735 1592 aa3.78□□□□□ -1.8
UBP15YMR304W SSA1P10591 642 aaKnown RBP3.75□□□□□ -1.81
UBP15YMR304W MAK10Q02197 733 aa3.74□□□□□ -1.81
UBP15YMR304W YMR074CQ04773 145 aa3.74□□□□□ -1.81
UBP15YMR304W YRF1-2P40105 1681 aa3.74□□□□□ -1.81
UBP15YMR304W YOR238WQ08634 303 aa3.74□□□□□ -1.81
UBP15YMR304W USO1P25386 1790 aa3.73□□□□□ -1.81
UBP15YMR304W TAF7Q05021 590 aa3.73□□□□□ -1.81
UBP15YMR304W NUP188P52593 1655 aaKnown RBP3.72□□□□□ -1.81
UBP15YMR304W SIS1P25294 352 aaKnown RBP3.72□□□□□ -1.81
UBP15YMR304W MRM1P25270 412 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms