RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W GRE2Q12068 342 aaKnown RBP3.23□□□□□ -1.89
RTP1YMR185W YEL023CP39992 682 aa3.23□□□□□ -1.89
RTP1YMR185W ATH1P48016 1211 aa3.23□□□□□ -1.89
RTP1YMR185W ELP4Q02884 456 aaKnown RBP3.21□□□□□ -1.9
RTP1YMR185W PEX29Q03370 554 aa3.21□□□□□ -1.9
RTP1YMR185W BCK2P33306 851 aa3.2□□□□□ -1.9
RTP1YMR185W PTC4P38089 393 aa3.19□□□□□ -1.9
RTP1YMR185W CHL1P22516 861 aaPredicted RBP3.18□□□□□ -1.9
RTP1YMR185W PML39Q03760 334 aa3.18□□□□□ -1.9
RTP1YMR185W PRE3P38624 215 aa3.17□□□□□ -1.9
RTP1YMR185W DAN4P47179 1161 aa3.17□□□□□ -1.9
RTP1YMR185W MAK11P20484 414 aaKnown RBP3.16□□□□□ -1.9
RTP1YMR185W PTC3P34221 468 aaKnown RBP3.16□□□□□ -1.9
RTP1YMR185W RAM2P29703 316 aa3.16□□□□□ -1.9
RTP1YMR185W GUT1P32190 709 aa3.16□□□□□ -1.9
RTP1YMR185W COQ8P27697 501 aa3.15□□□□□ -1.91
RTP1YMR185W EDS1P38073 919 aa3.15□□□□□ -1.91
RTP1YMR185W VRP1P37370 817 aa3.14□□□□□ -1.91
RTP1YMR185W MID1P41821 548 aa3.13□□□□□ -1.91
RTP1YMR185W RGA2Q06407 1009 aa3.12□□□□□ -1.91
RTP1YMR185W YDR344CQ05510 147 aa3.1□□□□□ -1.91
RTP1YMR185W SPT23P35210 1082 aa3.08□□□□□ -1.92
RTP1YMR185W XDJ1P39102 459 aa3.08□□□□□ -1.92
RTP1YMR185W DPS1P04802 557 aaKnown RBP3.07□□□□□ -1.92
RTP1YMR185W ARH1P48360 493 aa3.07□□□□□ -1.92
RTP1YMR185W PTC2P39966 464 aaKnown RBP3.07□□□□□ -1.92
RTP1YMR185W HAP5Q02516 242 aa3.07□□□□□ -1.92
RTP1YMR185W MPH3P0CE00 602 aa3.06□□□□□ -1.92
RTP1YMR185W AI4P03878 556 aa3.06□□□□□ -1.92
RTP1YMR185W ILV3P39522 585 aaKnown RBP3.05□□□□□ -1.92
RTP1YMR185W SOL3P38858 249 aa3.05□□□□□ -1.92
RTP1YMR185W YGR273CP53329 174 aa3.05□□□□□ -1.92
RTP1YMR185W SPA2P23201 1466 aaKnown RBP3.04□□□□□ -1.92
RTP1YMR185W MPC54Q08550 464 aa3.04□□□□□ -1.92
RTP1YMR185W BNI4P53858 892 aa3.02□□□□□ -1.93
RTP1YMR185W NMA111P53920 997 aa3.02□□□□□ -1.93
RTP1YMR185W DPL1Q05567 589 aa3.02□□□□□ -1.93
RTP1YMR185W SLI15P38283 698 aa3.01□□□□□ -1.93
RTP1YMR185W VHR2P40041 505 aa3.01□□□□□ -1.93
RTP1YMR185W NST1P53935 1240 aa3.01□□□□□ -1.93
RTP1YMR185W RPP1BP10622 106 aaKnown RBP3□□□□□ -1.93
RTP1YMR185W GYP1Q08484 637 aa3□□□□□ -1.93
RTP1YMR185W NOP53Q12080 455 aaKnown RBP3□□□□□ -1.93
RTP1YMR185W SGS1P35187 1447 aa3□□□□□ -1.93
RTP1YMR185W SET1P38827 1080 aaKnown RBP3□□□□□ -1.93
RTP1YMR185W KIC1P38692 1080 aa2.99□□□□□ -1.93
RTP1YMR185W INO80P53115 1489 aa2.99□□□□□ -1.93
RTP1YMR185W KEX1P09620 729 aa2.99□□□□□ -1.93
RTP1YMR185W RAD54P32863 898 aa2.99□□□□□ -1.93
RTP1YMR185W CDC73Q06697 393 aa2.98□□□□□ -1.93
RTP1YMR185W PEX21P50091 288 aa2.98□□□□□ -1.93
RTP1YMR185W ISU2Q12056 156 aa2.98□□□□□ -1.93
RTP1YMR185W YML082WQ04533 649 aaKnown RBP2.97□□□□□ -1.93
RTP1YMR185W SSN2P38931 1420 aa2.95□□□□□ -1.94
RTP1YMR185W IFH1P39520 1085 aa2.95□□□□□ -1.94
RTP1YMR185W YLR326WQ06170 240 aaKnown RBP2.94□□□□□ -1.94
RTP1YMR185W PDR1P12383 1068 aa2.94□□□□□ -1.94
RTP1YMR185W RGA1P39083 1007 aa2.94□□□□□ -1.94
RTP1YMR185W RAS1P01119 309 aa2.93□□□□□ -1.94
RTP1YMR185W YEL077CQ3E7X8 1277 aa2.93□□□□□ -1.94
RTP1YMR185W YPR015CQ12531 247 aa2.92□□□□□ -1.94
RTP1YMR185W PCS60P38137 543 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94 RIP-Chip
RTP1YMR185W YRR1Q12172 810 aa2.92□□□□□ -1.94
RTP1YMR185W NPL4P33755 580 aa2.92□□□□□ -1.94
RTP1YMR185W UBP14P38237 781 aaKnown RBP2.91□□□□□ -1.94
RTP1YMR185W TRK1P12685 1235 aa2.9□□□□□ -1.94
RTP1YMR185W AMS1P22855 1083 aa2.9□□□□□ -1.94
RTP1YMR185W VPS70P47161 811 aa2.9□□□□□ -1.95
RTP1YMR185W TUM1Q08686 304 aaKnown RBP2.89□□□□□ -1.95
RTP1YMR185W GBP2P25555 427 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
RTP1YMR185W MRF1P30775 413 aaPredicted RBP2.89□□□□□ -1.95
RTP1YMR185W SRC1Q03707 834 aa2.89□□□□□ -1.95
RTP1YMR185W SAS4Q04003 481 aa2.89□□□□□ -1.95
RTP1YMR185W ERG12P07277 443 aa2.89□□□□□ -1.95
RTP1YMR185W REF2P42073 533 aaPredicted RBP2.89□□□□□ -1.95
RTP1YMR185W GCD11P32481 527 aaKnown RBP2.88□□□□□ -1.95
RTP1YMR185W TCB3Q03640 1545 aaKnown RBP2.88□□□□□ -1.95
RTP1YMR185W RAM1P22007 431 aa2.88□□□□□ -1.95
RTP1YMR185W NUD1P32336 851 aa2.87□□□□□ -1.95
RTP1YMR185W PRT1P06103 763 aaKnown RBP2.87□□□□□ -1.95
RTP1YMR185W CSC1Q06538 782 aa2.87□□□□□ -1.95
RTP1YMR185W SPT16P32558 1035 aaKnown RBP2.86□□□□□ -1.95
RTP1YMR185W TFB4Q12004 338 aa2.86□□□□□ -1.95
RTP1YMR185W TY1B-DR4Q07793 1604 aa2.86□□□□□ -1.95
RTP1YMR185W ISM1P48526 1002 aa2.86□□□□□ -1.95
RTP1YMR185W FRK1Q03002 865 aaPredicted RBP2.85□□□□□ -1.95
RTP1YMR185W SKI3P17883 1432 aaKnown RBP2.85□□□□□ -1.95
RTP1YMR185W PAT1P25644 796 aaKnown RBP2.84□□□□□ -1.95
RTP1YMR185W YDR090CQ03193 310 aa2.84□□□□□ -1.95
RTP1YMR185W BUD20Q08004 166 aaPredicted RBP2.84□□□□□ -1.95
RTP1YMR185W STR2P47164 639 aa2.84□□□□□ -1.96
RTP1YMR185W GAR1P28007 205 aaKnown RBP2.83□□□□□ -1.96
RTP1YMR185W RRN7P40992 514 aa2.83□□□□□ -1.96
RTP1YMR185W GCR2Q01722 534 aa2.82□□□□□ -1.96
RTP1YMR185W YPR109WQ06104 294 aa2.82□□□□□ -1.96
RTP1YMR185W SDH2P21801 266 aa2.82□□□□□ -1.96
RTP1YMR185W BRE2P43132 505 aa2.82□□□□□ -1.96
RTP1YMR185W MAK21Q12176 1025 aaKnown RBP2.82□□□□□ -1.96
RTP1YMR185W ORC6P38826 435 aa2.81□□□□□ -1.96
RTP1YMR185W CST6P40535 587 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms