RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W HTA2P04912 132 aa9.12□□□□□ -0.95
SPO20YMR017W YGR273CP53329 174 aa9.11□□□□□ -0.95
SPO20YMR017W LEO1P38439 464 aa9.1□□□□□ -0.95
SPO20YMR017W SOL3P38858 249 aa9.1□□□□□ -0.95
SPO20YMR017W VHR2P40041 505 aa9.1□□□□□ -0.95
SPO20YMR017W EAP1P36041 632 aaKnown RBP9.09□□□□□ -0.95
SPO20YMR017W MAK21Q12176 1025 aaKnown RBP9.07□□□□□ -0.96
SPO20YMR017W UBP14P38237 781 aaKnown RBP9.06□□□□□ -0.96
SPO20YMR017W TIF11P38912 153 aaKnown RBP9.06□□□□□ -0.96
SPO20YMR017W NST1P53935 1240 aa9.06□□□□□ -0.96
SPO20YMR017W SPP1Q03012 353 aa9.06□□□□□ -0.96
SPO20YMR017W YLR326WQ06170 240 aaKnown RBP9.06□□□□□ -0.96
SPO20YMR017W MAM3Q12296 706 aa9.06□□□□□ -0.96
SPO20YMR017W TRP5P00931 707 aaKnown RBP9.05□□□□□ -0.96
SPO20YMR017W COX6P00427 148 aa9.03□□□□□ -0.96
SPO20YMR017W ULI1P43604 169 aa9.03□□□□□ -0.96
SPO20YMR017W KEX1P09620 729 aa9.02□□□□□ -0.97
SPO20YMR017W YEL023CP39992 682 aa9.02□□□□□ -0.97
SPO20YMR017W IES2P40154 320 aa9.02□□□□□ -0.97
SPO20YMR017W YDR090CQ03193 310 aa9.02□□□□□ -0.97
SPO20YMR017W RPN1P38764 993 aaKnown RBP9□□□□□ -0.97
SPO20YMR017W BUD31P25337 157 aaPredicted RBP8.99□□□□□ -0.97
SPO20YMR017W RAD54P32863 898 aa8.99□□□□□ -0.97
SPO20YMR017W AI4P03878 556 aa8.98□□□□□ -0.97
SPO20YMR017W MPH3P0CE00 602 aa8.98□□□□□ -0.97
SPO20YMR017W KIC1P38692 1080 aa8.98□□□□□ -0.97
SPO20YMR017W ILV3P39522 585 aaKnown RBP8.98□□□□□ -0.97
SPO20YMR017W IOC2Q12072 812 aa8.97□□□□□ -0.97
SPO20YMR017W PCS60P38137 543 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
SPO20YMR017W PTC4P38089 393 aa8.95□□□□□ -0.98
SPO20YMR017W NUP42P49686 430 aaKnown RBP8.95□□□□□ -0.98
SPO20YMR017W JIP4Q03361 876 aa8.95□□□□□ -0.98
SPO20YMR017W YNR021WP53723 404 aaKnown RBP8.93□□□□□ -0.98
SPO20YMR017W DAN4P47179 1161 aa8.92□□□□□ -0.98
SPO20YMR017W LDB19Q12502 818 aa8.92□□□□□ -0.98
SPO20YMR017W DIT2P21595 489 aa8.91□□□□□ -0.98
SPO20YMR017W YNL035CP53962 389 aaKnown RBP8.9□□□□□ -0.98
SPO20YMR017W GLC3P32775 704 aa8.88□□□□□ -0.99
SPO20YMR017W RTG1P32607 177 aa8.87□□□□□ -0.99
SPO20YMR017W SLI15P38283 698 aa8.86□□□□□ -0.99
SPO20YMR017W SEC61P32915 480 aa8.83□□□□□ -1
SPO20YMR017W ORC6P38826 435 aa8.83□□□□□ -1
SPO20YMR017W AIM7Q12156 149 aa8.82□□□□□ -1
SPO20YMR017W PML39Q03760 334 aa8.81□□□□□ -1
SPO20YMR017W PSE1P32337 1089 aaKnown RBP8.8□□□□□ -1
SPO20YMR017W KIN1P13185 1064 aa8.79□□□□□ -1
SPO20YMR017W FKH1P40466 484 aa8.78□□□□□ -1
SPO20YMR017W MID1P41821 548 aa8.78□□□□□ -1
SPO20YMR017W ATF2P53296 535 aa8.78□□□□□ -1
SPO20YMR017W RPP1BP10622 106 aaKnown RBP8.77□□□□□ -1.01
SPO20YMR017W TFG1P41895 735 aaPredicted RBP8.77□□□□□ -1.01
SPO20YMR017W CDC73Q06697 393 aa8.77□□□□□ -1.01
SPO20YMR017W NCR1Q12200 1170 aa8.77□□□□□ -1.01
SPO20YMR017W GAP1P19145 602 aaPredicted RBP8.74□□□□□ -1.01
SPO20YMR017W YDL129WQ07555 291 aa8.73□□□□□ -1.01
SPO20YMR017W MPC54Q08550 464 aa8.73□□□□□ -1.01
SPO20YMR017W RGR1P19263 1082 aa8.72□□□□□ -1.01
SPO20YMR017W PEX29Q03370 554 aa8.72□□□□□ -1.01
SPO20YMR017W DPL1Q05567 589 aa8.72□□□□□ -1.01
SPO20YMR017W CSC1Q06538 782 aa8.72□□□□□ -1.01
SPO20YMR017W MVP1P40959 511 aaKnown RBP8.71□□□□□ -1.02
SPO20YMR017W AIR2Q12476 344 aaKnown RBP8.7□□□□□ -1.02
SPO20YMR017W SIS1P25294 352 aaKnown RBP8.68□□□□□ -1.02
SPO20YMR017W TFB4Q12004 338 aa8.68□□□□□ -1.02
SPO20YMR017W TEA1P47988 759 aa8.67□□□□□ -1.02
SPO20YMR017W PEX21P50091 288 aa8.67□□□□□ -1.02
SPO20YMR017W CLB5P30283 435 aa8.66□□□□□ -1.02
SPO20YMR017W SAP30P38429 201 aa8.66□□□□□ -1.02
SPO20YMR017W YPR109WQ06104 294 aa8.64□□□□□ -1.03
SPO20YMR017W NMA111P53920 997 aa8.63□□□□□ -1.03
SPO20YMR017W ISU2Q12056 156 aa8.63□□□□□ -1.03
SPO20YMR017W DMA2P53924 522 aa8.62□□□□□ -1.03
SPO20YMR017W TUM1Q08686 304 aaKnown RBP8.62□□□□□ -1.03
SPO20YMR017W TAF7Q05021 590 aa8.61□□□□□ -1.03
SPO20YMR017W GUA1P38625 525 aaKnown RBP8.59□□□□□ -1.03
SPO20YMR017W YRR1Q12172 810 aa8.59□□□□□ -1.03
SPO20YMR017W ARH1P48360 493 aa8.58□□□□□ -1.04
SPO20YMR017W HAP5Q02516 242 aa8.58□□□□□ -1.04
SPO20YMR017W YDR344CQ05510 147 aa8.58□□□□□ -1.04
SPO20YMR017W BMT6Q12291 365 aa8.57□□□□□ -1.04
SPO20YMR017W YJL171CP46992 396 aa8.56□□□□□ -1.04
SPO20YMR017W NIS1P53939 407 aa8.56□□□□□ -1.04
SPO20YMR017W CSN12P47130 423 aa8.54□□□□□ -1.04
SPO20YMR017W ELP4Q02884 456 aaKnown RBP8.54□□□□□ -1.04
SPO20YMR017W YMR196WQ04336 1088 aa8.54□□□□□ -1.04
SPO20YMR017W FPK1P53739 893 aa8.52□□□□□ -1.05
SPO20YMR017W HPC2Q01448 625 aa8.52□□□□□ -1.05
SPO20YMR017W SSA2P10592 639 aaKnown RBP8.51□□□□□ -1.05
SPO20YMR017W PDR1P12383 1068 aa8.51□□□□□ -1.05
SPO20YMR017W BNI4P53858 892 aa8.5□□□□□ -1.05
SPO20YMR017W KTR1P27810 393 aaKnown RBP8.49□□□□□ -1.05
SPO20YMR017W NUD1P32336 851 aa8.49□□□□□ -1.05
SPO20YMR017W HST2P53686 357 aa8.49□□□□□ -1.05
SPO20YMR017W TYW1Q08960 810 aaKnown RBP8.49□□□□□ -1.05
SPO20YMR017W SIT4P20604 311 aa8.48□□□□□ -1.05
SPO20YMR017W HGH1P48362 394 aaKnown RBP8.48□□□□□ -1.05
SPO20YMR017W GLN1P32288 370 aaKnown RBP8.47□□□□□ -1.05
SPO20YMR017W SPT23P35210 1082 aa8.47□□□□□ -1.05
SPO20YMR017W PRE3P38624 215 aa8.47□□□□□ -1.05
SPO20YMR017W TFB3Q03290 321 aa8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms