RNA–Protein interactions for RNA: YMR014W

BUD22, Transcript of Protein required for rRNA maturation and ribosomal subunit biogenesis, yeastyeast

Gene BUD22, Length 1,560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD22YMR014W YEL023CP39992 682 aa8.79□□□□□ -1
BUD22YMR014W BCK2P33306 851 aa8.78□□□□□ -1
BUD22YMR014W PTC4P38089 393 aa8.78□□□□□ -1
BUD22YMR014W CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1.01
BUD22YMR014W PRE3P38624 215 aa8.73□□□□□ -1.01
BUD22YMR014W GRE2Q12068 342 aaKnown RBP8.68□□□□□ -1.02
BUD22YMR014W YDR344CQ05510 147 aa8.67□□□□□ -1.02
BUD22YMR014W MIF2P35201 549 aa8.64□□□□□ -1.03
BUD22YMR014W PML39Q03760 334 aa8.64□□□□□ -1.03
BUD22YMR014W EDS1P38073 919 aa8.6□□□□□ -1.03
BUD22YMR014W VRP1P37370 817 aa8.59□□□□□ -1.03
BUD22YMR014W ATH1P48016 1211 aa8.59□□□□□ -1.03
BUD22YMR014W MAK11P20484 414 aaKnown RBP8.58□□□□□ -1.04
BUD22YMR014W RAM2P29703 316 aa8.58□□□□□ -1.04
BUD22YMR014W PTC3P34221 468 aaKnown RBP8.57□□□□□ -1.04
BUD22YMR014W ELP4Q02884 456 aaKnown RBP8.57□□□□□ -1.04
BUD22YMR014W GUT1P32190 709 aa8.56□□□□□ -1.04
BUD22YMR014W XDJ1P39102 459 aa8.53□□□□□ -1.04
BUD22YMR014W MID1P41821 548 aa8.52□□□□□ -1.04
BUD22YMR014W NST1P53935 1240 aa8.52□□□□□ -1.04
BUD22YMR014W SGS1P35187 1447 aa8.49□□□□□ -1.05
BUD22YMR014W COQ8P27697 501 aa8.48□□□□□ -1.05
BUD22YMR014W SOL3P38858 249 aa8.48□□□□□ -1.05
BUD22YMR014W ARH1P48360 493 aa8.48□□□□□ -1.05
BUD22YMR014W INO80P53115 1489 aa8.45□□□□□ -1.06
BUD22YMR014W MPH3P0CE00 602 aa8.42□□□□□ -1.06
BUD22YMR014W PEX29Q03370 554 aa8.42□□□□□ -1.06
BUD22YMR014W ILV3P39522 585 aaKnown RBP8.41□□□□□ -1.06
BUD22YMR014W AI4P03878 556 aa8.4□□□□□ -1.06
BUD22YMR014W DPS1P04802 557 aaKnown RBP8.39□□□□□ -1.07
BUD22YMR014W SPT23P35210 1082 aa8.39□□□□□ -1.07
BUD22YMR014W HAP5Q02516 242 aa8.35□□□□□ -1.07
BUD22YMR014W YGR273CP53329 174 aa8.31□□□□□ -1.08
BUD22YMR014W SPA2P23201 1466 aaKnown RBP8.3□□□□□ -1.08
BUD22YMR014W BNI4P53858 892 aa8.29□□□□□ -1.08
BUD22YMR014W MPC54Q08550 464 aa8.29□□□□□ -1.08
BUD22YMR014W PTC2P39966 464 aaKnown RBP8.27□□□□□ -1.09
BUD22YMR014W TCB3Q03640 1545 aaKnown RBP8.26□□□□□ -1.09
BUD22YMR014W NOP53Q12080 455 aaKnown RBP8.26□□□□□ -1.09
BUD22YMR014W YML082WQ04533 649 aaKnown RBP8.25□□□□□ -1.09
BUD22YMR014W NMA111P53920 997 aa8.23□□□□□ -1.09
BUD22YMR014W SLI15P38283 698 aa8.22□□□□□ -1.09
BUD22YMR014W SRC1Q03707 834 aa8.21□□□□□ -1.1
BUD22YMR014W DPL1Q05567 589 aa8.18□□□□□ -1.1
BUD22YMR014W SSN2P38931 1420 aa8.16□□□□□ -1.1
BUD22YMR014W YPR015CQ12531 247 aa8.14□□□□□ -1.11
BUD22YMR014W KEX1P09620 729 aa8.12□□□□□ -1.11
BUD22YMR014W TY1B-DR4Q07793 1604 aa8.12□□□□□ -1.11
BUD22YMR014W RAS1P01119 309 aa8.1□□□□□ -1.11
BUD22YMR014W RAM1P22007 431 aa8.08□□□□□ -1.12
BUD22YMR014W CDC73Q06697 393 aa8.07□□□□□ -1.12
BUD22YMR014W ISU2Q12056 156 aa8.07□□□□□ -1.12
BUD22YMR014W YLR326WQ06170 240 aaKnown RBP8.01□□□□□ -1.13
BUD22YMR014W GYP1Q08484 637 aa8.01□□□□□ -1.13
BUD22YMR014W MON2P48563 1636 aaPredicted RBP8.01□□□□□ -1.13
BUD22YMR014W PDR1P12383 1068 aa8.01□□□□□ -1.13
BUD22YMR014W SET1P38827 1080 aaKnown RBP8.01□□□□□ -1.13
BUD22YMR014W VHR2P40041 505 aa8.01□□□□□ -1.13
BUD22YMR014W UBP14P38237 781 aaKnown RBP8□□□□□ -1.13
BUD22YMR014W PCS60P38137 543 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
BUD22YMR014W HSL1P34244 1518 aa7.96□□□□□ -1.14
BUD22YMR014W AMS1P22855 1083 aa7.95□□□□□ -1.14
BUD22YMR014W RGA2Q06407 1009 aa7.94□□□□□ -1.14
BUD22YMR014W SPT6P23615 1451 aaKnown RBP7.93□□□□□ -1.14
BUD22YMR014W SDH2P21801 266 aa7.93□□□□□ -1.14
BUD22YMR014W RAD54P32863 898 aa7.93□□□□□ -1.14
BUD22YMR014W RGA1P39083 1007 aa7.92□□□□□ -1.14
BUD22YMR014W TRK1P12685 1235 aa7.89□□□□□ -1.15
BUD22YMR014W SAS4Q04003 481 aa7.89□□□□□ -1.15
BUD22YMR014W SWR1Q05471 1514 aa7.86□□□□□ -1.15
BUD22YMR014W RPP1BP10622 106 aaKnown RBP7.86□□□□□ -1.15
BUD22YMR014W YDR090CQ03193 310 aa7.84□□□□□ -1.15
BUD22YMR014W BUD20Q08004 166 aaPredicted RBP7.82□□□□□ -1.16
BUD22YMR014W YRR1Q12172 810 aa7.82□□□□□ -1.16
BUD22YMR014W YEL077CQ3E7X8 1277 aa7.82□□□□□ -1.16
BUD22YMR014W HIR3P47171 1648 aa7.81□□□□□ -1.16
BUD22YMR014W PEX21P50091 288 aa7.79□□□□□ -1.16
BUD22YMR014W KIC1P38692 1080 aa7.78□□□□□ -1.16
BUD22YMR014W STR2P47164 639 aa7.78□□□□□ -1.16
BUD22YMR014W PRT1P06103 763 aaKnown RBP7.77□□□□□ -1.17
BUD22YMR014W MRF1P30775 413 aaPredicted RBP7.77□□□□□ -1.17
BUD22YMR014W ISM1P48526 1002 aa7.76□□□□□ -1.17
BUD22YMR014W GAP1P19145 602 aaPredicted RBP7.75□□□□□ -1.17
BUD22YMR014W XRN1P22147 1528 aaKnown RBP7.74□□□□□ -1.17
BUD22YMR014W TUM1Q08686 304 aaKnown RBP7.73□□□□□ -1.17
BUD22YMR014W NUD1P32336 851 aa7.72□□□□□ -1.17
BUD22YMR014W SIN3P22579 1536 aa7.72□□□□□ -1.17
BUD22YMR014W IFH1P39520 1085 aa7.71□□□□□ -1.17
BUD22YMR014W CSC1Q06538 782 aa7.71□□□□□ -1.17
BUD22YMR014W TFB4Q12004 338 aa7.71□□□□□ -1.17
BUD22YMR014W THO2P53552 1597 aaKnown RBP7.69□□□□□ -1.18
BUD22YMR014W ERG12P07277 443 aa7.69□□□□□ -1.18
BUD22YMR014W REF2P42073 533 aaPredicted RBP7.69□□□□□ -1.18
BUD22YMR014W REV3P14284 1504 aa7.69□□□□□ -1.18
BUD22YMR014W AIR1P40507 360 aaKnown RBP7.67□□□□□ -1.18
BUD22YMR014W CST6P40535 587 aa7.67□□□□□ -1.18
BUD22YMR014W ORC6P38826 435 aa7.67□□□□□ -1.18
BUD22YMR014W CLA4P48562 842 aa7.67□□□□□ -1.18
BUD22YMR014W NPL4P33755 580 aa7.66□□□□□ -1.18
BUD22YMR014W TY1A-DR4O74302 440 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms