RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C DMA1P38823 416 aa9.08□□□□□ -0.96
PML39YML107C PTC4P38089 393 aa9.06□□□□□ -0.96
PML39YML107C YEL023CP39992 682 aa9.06□□□□□ -0.96
PML39YML107C YDL129WQ07555 291 aa9.04□□□□□ -0.96
PML39YML107C MIF2P35201 549 aa9.03□□□□□ -0.96
PML39YML107C GRE2Q12068 342 aaKnown RBP9.02□□□□□ -0.97
PML39YML107C MAK11P20484 414 aaKnown RBP8.98□□□□□ -0.97
PML39YML107C RAM2P29703 316 aa8.97□□□□□ -0.97
PML39YML107C CHL1P22516 861 aaPredicted RBP8.95□□□□□ -0.98
PML39YML107C ATH1P48016 1211 aa8.95□□□□□ -0.98
PML39YML107C PTC3P34221 468 aaKnown RBP8.92□□□□□ -0.98
PML39YML107C PRE3P38624 215 aa8.92□□□□□ -0.98
PML39YML107C GUT1P32190 709 aa8.9□□□□□ -0.98
PML39YML107C BCK2P33306 851 aa8.9□□□□□ -0.98
PML39YML107C EDS1P38073 919 aa8.9□□□□□ -0.98
PML39YML107C PML39Q03760 334 aa8.89□□□□□ -0.99
PML39YML107C COQ8P27697 501 aa8.87□□□□□ -0.99
PML39YML107C ELP4Q02884 456 aaKnown RBP8.82□□□□□ -1
PML39YML107C YDR344CQ05510 147 aa8.77□□□□□ -1.01
PML39YML107C MID1P41821 548 aa8.76□□□□□ -1.01
PML39YML107C VRP1P37370 817 aa8.75□□□□□ -1.01
PML39YML107C SOL3P38858 249 aa8.75□□□□□ -1.01
PML39YML107C NST1P53935 1240 aa8.74□□□□□ -1.01
PML39YML107C PEX29Q03370 554 aa8.73□□□□□ -1.01
PML39YML107C AI4P03878 556 aa8.71□□□□□ -1.02
PML39YML107C MPH3P0CE00 602 aa8.71□□□□□ -1.02
PML39YML107C ARH1P48360 493 aa8.71□□□□□ -1.02
PML39YML107C NOP53Q12080 455 aaKnown RBP8.69□□□□□ -1.02
PML39YML107C XDJ1P39102 459 aa8.68□□□□□ -1.02
PML39YML107C SET1P38827 1080 aaKnown RBP8.65□□□□□ -1.02
PML39YML107C YGR273CP53329 174 aa8.65□□□□□ -1.02
PML39YML107C SPT23P35210 1082 aa8.63□□□□□ -1.03
PML39YML107C ILV3P39522 585 aaKnown RBP8.63□□□□□ -1.03
PML39YML107C HAP5Q02516 242 aa8.61□□□□□ -1.03
PML39YML107C MPC54Q08550 464 aa8.56□□□□□ -1.04
PML39YML107C IFH1P39520 1085 aa8.54□□□□□ -1.04
PML39YML107C BNI4P53858 892 aa8.54□□□□□ -1.04
PML39YML107C SAS10Q12136 610 aaPredicted RBP8.54□□□□□ -1.04
PML39YML107C DPS1P04802 557 aaKnown RBP8.53□□□□□ -1.04
PML39YML107C SLI15P38283 698 aa8.53□□□□□ -1.04
PML39YML107C PTC2P39966 464 aaKnown RBP8.53□□□□□ -1.04
PML39YML107C NMA111P53920 997 aa8.52□□□□□ -1.05
PML39YML107C DPL1Q05567 589 aa8.49□□□□□ -1.05
PML39YML107C VPS70P47161 811 aa8.48□□□□□ -1.05
PML39YML107C YML082WQ04533 649 aaKnown RBP8.48□□□□□ -1.05
PML39YML107C KEX1P09620 729 aa8.46□□□□□ -1.06
PML39YML107C YPR148CQ06523 435 aa8.44□□□□□ -1.06
PML39YML107C CKB1P43639 278 aa8.4□□□□□ -1.06
PML39YML107C ISU2Q12056 156 aa8.4□□□□□ -1.06
PML39YML107C VHR2P40041 505 aa8.39□□□□□ -1.07
PML39YML107C CDC73Q06697 393 aa8.38□□□□□ -1.07
PML39YML107C UBP14P38237 781 aaKnown RBP8.37□□□□□ -1.07
PML39YML107C YLR326WQ06170 240 aaKnown RBP8.37□□□□□ -1.07
PML39YML107C SPB4P25808 606 aaPredicted RBP8.36□□□□□ -1.07
PML39YML107C RAD54P32863 898 aa8.33□□□□□ -1.08
PML39YML107C PCS60P38137 543 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08 RIP-Chip
PML39YML107C YPR015CQ12531 247 aa8.32□□□□□ -1.08
PML39YML107C RPP1BP10622 106 aaKnown RBP8.31□□□□□ -1.08
PML39YML107C GYP1Q08484 637 aa8.3□□□□□ -1.08
PML39YML107C RAM1P22007 431 aa8.29□□□□□ -1.08
PML39YML107C REF2P42073 533 aaPredicted RBP8.29□□□□□ -1.08
PML39YML107C PBS2P08018 668 aa8.27□□□□□ -1.09
PML39YML107C PDR1P12383 1068 aa8.27□□□□□ -1.09
PML39YML107C KIC1P38692 1080 aa8.26□□□□□ -1.09
PML39YML107C RAS1P01119 309 aa8.24□□□□□ -1.09
PML39YML107C LEU3P08638 886 aa8.24□□□□□ -1.09
PML39YML107C SRC1Q03707 834 aa8.24□□□□□ -1.09
PML39YML107C PEX21P50091 288 aa8.2□□□□□ -1.1
PML39YML107C YDR090CQ03193 310 aa8.2□□□□□ -1.1
PML39YML107C DSF2P38213 736 aa8.19□□□□□ -1.1
PML39YML107C SAS4Q04003 481 aa8.19□□□□□ -1.1
PML39YML107C MAK21Q12176 1025 aaKnown RBP8.19□□□□□ -1.1
PML39YML107C MAM3Q12296 706 aa8.18□□□□□ -1.1
PML39YML107C AMS1P22855 1083 aa8.16□□□□□ -1.1
PML39YML107C YRR1Q12172 810 aa8.16□□□□□ -1.1
PML39YML107C COX6P00427 148 aa8.15□□□□□ -1.1
PML39YML107C LEO1P38439 464 aa8.12□□□□□ -1.11
PML39YML107C IES2P40154 320 aa8.11□□□□□ -1.11
PML39YML107C CSC1Q06538 782 aa8.11□□□□□ -1.11
PML39YML107C TUM1Q08686 304 aaKnown RBP8.11□□□□□ -1.11
PML39YML107C MRF1P30775 413 aaPredicted RBP8.1□□□□□ -1.11
PML39YML107C BUD20Q08004 166 aaPredicted RBP8.1□□□□□ -1.11
PML39YML107C YEL077CQ3E7X8 1277 aa8.1□□□□□ -1.11
PML39YML107C PRT1P06103 763 aaKnown RBP8.09□□□□□ -1.11
PML39YML107C TFB4Q12004 338 aa8.09□□□□□ -1.11
PML39YML107C SDH2P21801 266 aa8.08□□□□□ -1.12
PML39YML107C RPN1P38764 993 aaKnown RBP8.08□□□□□ -1.12
PML39YML107C TRK1P12685 1235 aa8.07□□□□□ -1.12
PML39YML107C GAP1P19145 602 aaPredicted RBP8.06□□□□□ -1.12
PML39YML107C NUD1P32336 851 aa8.05□□□□□ -1.12
PML39YML107C NPL4P33755 580 aa8.05□□□□□ -1.12
PML39YML107C STR2P47164 639 aa8.04□□□□□ -1.12
PML39YML107C ISM1P48526 1002 aa8.04□□□□□ -1.12
PML39YML107C ERG12P07277 443 aa8.02□□□□□ -1.13
PML39YML107C ORC6P38826 435 aa8.02□□□□□ -1.13
PML39YML107C GCD11P32481 527 aaKnown RBP8.01□□□□□ -1.13
PML39YML107C NUP42P49686 430 aaKnown RBP8.01□□□□□ -1.13
PML39YML107C YNR021WP53723 404 aaKnown RBP8.01□□□□□ -1.13
PML39YML107C DIT2P21595 489 aa8□□□□□ -1.13
PML39YML107C MVP1P40959 511 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms