RNA–Protein interactions for RNA: YLR306W

UBC12, Transcript of Enzyme that mediates the conjugation of Rub1p, yeastyeast

Gene UBC12, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC12YLR306W GRE2Q12068 342 aaKnown RBP11.74□□□□□ -0.53
UBC12YLR306W NCR1Q12200 1170 aa11.72□□□□□ -0.53
UBC12YLR306W DAN4P47179 1161 aa11.71□□□□□ -0.53
UBC12YLR306W BMT6Q12291 365 aa11.7□□□□□ -0.54
UBC12YLR306W NOP53Q12080 455 aaKnown RBP11.69□□□□□ -0.54
UBC12YLR306W GUT1P32190 709 aa11.68□□□□□ -0.54
UBC12YLR306W ATH1P48016 1211 aa11.67□□□□□ -0.54
UBC12YLR306W YEL023CP39992 682 aa11.66□□□□□ -0.54
UBC12YLR306W PTC4P38089 393 aa11.65□□□□□ -0.54
UBC12YLR306W TFG1P41895 735 aaPredicted RBP11.59□□□□□ -0.55
UBC12YLR306W NST1P53935 1240 aa11.56□□□□□ -0.56
UBC12YLR306W YDL129WQ07555 291 aa11.54□□□□□ -0.56
UBC12YLR306W SOL3P38858 249 aa11.52□□□□□ -0.57
UBC12YLR306W SAP30P38429 201 aa11.47□□□□□ -0.57
UBC12YLR306W SET1P38827 1080 aaKnown RBP11.47□□□□□ -0.57
UBC12YLR306W AI4P03878 556 aa11.44□□□□□ -0.58
UBC12YLR306W MPH3P0CE00 602 aa11.43□□□□□ -0.58
UBC12YLR306W YGR273CP53329 174 aa11.42□□□□□ -0.58
UBC12YLR306W PML39Q03760 334 aa11.4□□□□□ -0.58
UBC12YLR306W ILV3P39522 585 aaKnown RBP11.36□□□□□ -0.59
UBC12YLR306W CHL1P22516 861 aaPredicted RBP11.33□□□□□ -0.6
UBC12YLR306W PRE3P38624 215 aa11.32□□□□□ -0.6
UBC12YLR306W IFH1P39520 1085 aa11.29□□□□□ -0.6
UBC12YLR306W MID1P41821 548 aa11.28□□□□□ -0.6
UBC12YLR306W YDR344CQ05510 147 aa11.24□□□□□ -0.61
UBC12YLR306W ARH1P48360 493 aa11.23□□□□□ -0.61
UBC12YLR306W YPR148CQ06523 435 aa11.23□□□□□ -0.61
UBC12YLR306W KEX1P09620 729 aa11.21□□□□□ -0.61
UBC12YLR306W UBP14P38237 781 aaKnown RBP11.19□□□□□ -0.62
UBC12YLR306W ELP4Q02884 456 aaKnown RBP11.19□□□□□ -0.62
UBC12YLR306W SLI15P38283 698 aa11.18□□□□□ -0.62
UBC12YLR306W PEX29Q03370 554 aa11.18□□□□□ -0.62
UBC12YLR306W YLR326WQ06170 240 aaKnown RBP11.18□□□□□ -0.62
UBC12YLR306W BCK2P33306 851 aa11.16□□□□□ -0.62
UBC12YLR306W MPC54Q08550 464 aa11.15□□□□□ -0.62
UBC12YLR306W VHR2P40041 505 aa11.13□□□□□ -0.63
UBC12YLR306W HAP5Q02516 242 aa11.11□□□□□ -0.63
UBC12YLR306W SPT23P35210 1082 aa11.09□□□□□ -0.63
UBC12YLR306W DPL1Q05567 589 aa11.09□□□□□ -0.63
UBC12YLR306W RAD54P32863 898 aa11.06□□□□□ -0.64
UBC12YLR306W PCS60P38137 543 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
UBC12YLR306W BNI4P53858 892 aa11.06□□□□□ -0.64
UBC12YLR306W REF2P42073 533 aaPredicted RBP11.04□□□□□ -0.64
UBC12YLR306W NMA111P53920 997 aa11.04□□□□□ -0.64
UBC12YLR306W YDR090CQ03193 310 aa11.04□□□□□ -0.64
UBC12YLR306W VPS70P47161 811 aa11.02□□□□□ -0.65
UBC12YLR306W VRP1P37370 817 aa11.01□□□□□ -0.65
UBC12YLR306W DMA1P38823 416 aa11□□□□□ -0.65
UBC12YLR306W XDJ1P39102 459 aa10.98□□□□□ -0.65
UBC12YLR306W CDC73Q06697 393 aa10.98□□□□□ -0.65
UBC12YLR306W YML082WQ04533 649 aaKnown RBP10.97□□□□□ -0.65
UBC12YLR306W ISU2Q12056 156 aa10.97□□□□□ -0.65
UBC12YLR306W PTC2P39966 464 aaKnown RBP10.95□□□□□ -0.66
UBC12YLR306W RPP1BP10622 106 aaKnown RBP10.94□□□□□ -0.66
UBC12YLR306W KIC1P38692 1080 aa10.94□□□□□ -0.66
UBC12YLR306W MAK21Q12176 1025 aaKnown RBP10.93□□□□□ -0.66
UBC12YLR306W SAS10Q12136 610 aaPredicted RBP10.9□□□□□ -0.66
UBC12YLR306W CKB1P43639 278 aa10.89□□□□□ -0.67
UBC12YLR306W COX6P00427 148 aa10.88□□□□□ -0.67
UBC12YLR306W GAP1P19145 602 aaPredicted RBP10.86□□□□□ -0.67
UBC12YLR306W RAM1P22007 431 aa10.85□□□□□ -0.67
UBC12YLR306W YPR015CQ12531 247 aa10.82□□□□□ -0.68
UBC12YLR306W ORC6P38826 435 aa10.81□□□□□ -0.68
UBC12YLR306W CSC1Q06538 782 aa10.81□□□□□ -0.68
UBC12YLR306W TFB4Q12004 338 aa10.78□□□□□ -0.68
UBC12YLR306W PBS2P08018 668 aa10.76□□□□□ -0.69
UBC12YLR306W PDR1P12383 1068 aa10.76□□□□□ -0.69
UBC12YLR306W PEX21P50091 288 aa10.74□□□□□ -0.69
UBC12YLR306W YRR1Q12172 810 aa10.71□□□□□ -0.69
UBC12YLR306W DPS1P04802 557 aaKnown RBP10.67□□□□□ -0.7
UBC12YLR306W DSF2P38213 736 aa10.67□□□□□ -0.7
UBC12YLR306W MVP1P40959 511 aaKnown RBP10.67□□□□□ -0.7
UBC12YLR306W TUM1Q08686 304 aaKnown RBP10.67□□□□□ -0.7
UBC12YLR306W RGR1P19263 1082 aa10.64□□□□□ -0.71
UBC12YLR306W MAM3Q12296 706 aa10.64□□□□□ -0.71
UBC12YLR306W SAS4Q04003 481 aa10.63□□□□□ -0.71
UBC12YLR306W GYP1Q08484 637 aa10.62□□□□□ -0.71
UBC12YLR306W NUD1P32336 851 aa10.61□□□□□ -0.71
UBC12YLR306W PSE1P32337 1089 aaKnown RBP10.61□□□□□ -0.71
UBC12YLR306W STR2P47164 639 aa10.6□□□□□ -0.71
UBC12YLR306W BUD20Q08004 166 aaPredicted RBP10.6□□□□□ -0.71
UBC12YLR306W RQC2Q12532 1038 aaKnown RBP10.6□□□□□ -0.71
UBC12YLR306W ISM1P48526 1002 aa10.58□□□□□ -0.72
UBC12YLR306W YPR109WQ06104 294 aa10.58□□□□□ -0.72
UBC12YLR306W PRT1P06103 763 aaKnown RBP10.55□□□□□ -0.72
UBC12YLR306W IES2P40154 320 aa10.55□□□□□ -0.72
UBC12YLR306W SDH2P21801 266 aa10.52□□□□□ -0.73
UBC12YLR306W SPB4P25808 606 aaPredicted RBP10.52□□□□□ -0.73
UBC12YLR306W NPL4P33755 580 aa10.52□□□□□ -0.73
UBC12YLR306W NUP42P49686 430 aaKnown RBP10.52□□□□□ -0.73
UBC12YLR306W CLB5P30283 435 aa10.49□□□□□ -0.73
UBC12YLR306W TY1A-DR4O74302 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-HP0C2I4 478 aaKnown RBP10.48□□□□□ -0.73
UBC12YLR306W TY1A-AP0CX57 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-PR1P0CX58 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-ORP0CX59 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-PR2P0CX60 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-DR5P0CX65 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-ER2P0CX66 440 aa10.48□□□□□ -0.73
UBC12YLR306W TY1A-GR3P0CX67 440 aa10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms