RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C GRE2Q12068 342 aaKnown RBP9.37□□□□□ -0.91
YPT6YLR262C DAN4P47179 1161 aa9.35□□□□□ -0.91
YPT6YLR262C YEL023CP39992 682 aa9.34□□□□□ -0.91
YPT6YLR262C PTC4P38089 393 aa9.33□□□□□ -0.92
YPT6YLR262C ATH1P48016 1211 aa9.32□□□□□ -0.92
YPT6YLR262C EDS1P38073 919 aa9.31□□□□□ -0.92
YPT6YLR262C COQ8P27697 501 aa9.3□□□□□ -0.92
YPT6YLR262C PTC3P34221 468 aaKnown RBP9.3□□□□□ -0.92
YPT6YLR262C SAP30P38429 201 aa9.28□□□□□ -0.92
YPT6YLR262C YDL129WQ07555 291 aa9.28□□□□□ -0.92
YPT6YLR262C GUT1P32190 709 aa9.27□□□□□ -0.93
YPT6YLR262C PML39Q03760 334 aa9.16□□□□□ -0.94
YPT6YLR262C NOP53Q12080 455 aaKnown RBP9.16□□□□□ -0.94
YPT6YLR262C CHL1P22516 861 aaPredicted RBP9.14□□□□□ -0.95
YPT6YLR262C PRE3P38624 215 aa9.12□□□□□ -0.95
YPT6YLR262C SOL3P38858 249 aa9.1□□□□□ -0.95
YPT6YLR262C NST1P53935 1240 aa9.1□□□□□ -0.95
YPT6YLR262C AI4P03878 556 aa9.07□□□□□ -0.96
YPT6YLR262C MPH3P0CE00 602 aa9.07□□□□□ -0.96
YPT6YLR262C BCK2P33306 851 aa9.05□□□□□ -0.96
YPT6YLR262C ELP4Q02884 456 aaKnown RBP9.05□□□□□ -0.96
YPT6YLR262C MID1P41821 548 aa9.04□□□□□ -0.96
YPT6YLR262C YGR273CP53329 174 aa9.03□□□□□ -0.96
YPT6YLR262C PEX29Q03370 554 aa9.02□□□□□ -0.97
YPT6YLR262C SET1P38827 1080 aaKnown RBP9.01□□□□□ -0.97
YPT6YLR262C YDR344CQ05510 147 aa8.99□□□□□ -0.97
YPT6YLR262C ILV3P39522 585 aaKnown RBP8.98□□□□□ -0.97
YPT6YLR262C ARH1P48360 493 aa8.98□□□□□ -0.97
YPT6YLR262C VRP1P37370 817 aa8.92□□□□□ -0.98
YPT6YLR262C SPT23P35210 1082 aa8.89□□□□□ -0.99
YPT6YLR262C HAP5Q02516 242 aa8.89□□□□□ -0.99
YPT6YLR262C SLI15P38283 698 aa8.88□□□□□ -0.99
YPT6YLR262C MPC54Q08550 464 aa8.88□□□□□ -0.99
YPT6YLR262C KEX1P09620 729 aa8.86□□□□□ -0.99
YPT6YLR262C XDJ1P39102 459 aa8.85□□□□□ -0.99
YPT6YLR262C BNI4P53858 892 aa8.83□□□□□ -1
YPT6YLR262C DPL1Q05567 589 aa8.83□□□□□ -1
YPT6YLR262C IFH1P39520 1085 aa8.82□□□□□ -1
YPT6YLR262C NMA111P53920 997 aa8.82□□□□□ -1
YPT6YLR262C VHR2P40041 505 aa8.81□□□□□ -1
YPT6YLR262C PTC2P39966 464 aaKnown RBP8.8□□□□□ -1
YPT6YLR262C YLR326WQ06170 240 aaKnown RBP8.8□□□□□ -1
YPT6YLR262C UBP14P38237 781 aaKnown RBP8.79□□□□□ -1
YPT6YLR262C RAD54P32863 898 aa8.75□□□□□ -1.01
YPT6YLR262C YML082WQ04533 649 aaKnown RBP8.75□□□□□ -1.01
YPT6YLR262C ISU2Q12056 156 aa8.74□□□□□ -1.01
YPT6YLR262C PCS60P38137 543 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
YPT6YLR262C CDC73Q06697 393 aa8.72□□□□□ -1.01
YPT6YLR262C RPP1BP10622 106 aaKnown RBP8.71□□□□□ -1.02
YPT6YLR262C KIC1P38692 1080 aa8.69□□□□□ -1.02
YPT6YLR262C YPR148CQ06523 435 aa8.69□□□□□ -1.02
YPT6YLR262C DPS1P04802 557 aaKnown RBP8.67□□□□□ -1.02
YPT6YLR262C REF2P42073 533 aaPredicted RBP8.66□□□□□ -1.02
YPT6YLR262C VPS70P47161 811 aa8.64□□□□□ -1.03
YPT6YLR262C YDR090CQ03193 310 aa8.64□□□□□ -1.03
YPT6YLR262C DMA1P38823 416 aa8.62□□□□□ -1.03
YPT6YLR262C YPR015CQ12531 247 aa8.6□□□□□ -1.03
YPT6YLR262C RAM1P22007 431 aa8.59□□□□□ -1.03
YPT6YLR262C PDR1P12383 1068 aa8.58□□□□□ -1.04
YPT6YLR262C PEX21P50091 288 aa8.57□□□□□ -1.04
YPT6YLR262C GYP1Q08484 637 aa8.56□□□□□ -1.04
YPT6YLR262C MAK21Q12176 1025 aaKnown RBP8.55□□□□□ -1.04
YPT6YLR262C CSC1Q06538 782 aa8.52□□□□□ -1.05
YPT6YLR262C COX6P00427 148 aa8.51□□□□□ -1.05
YPT6YLR262C TFB4Q12004 338 aa8.51□□□□□ -1.05
YPT6YLR262C YRR1Q12172 810 aa8.51□□□□□ -1.05
YPT6YLR262C RQC2Q12532 1038 aaKnown RBP8.51□□□□□ -1.05
YPT6YLR262C GAP1P19145 602 aaPredicted RBP8.49□□□□□ -1.05
YPT6YLR262C SAS4Q04003 481 aa8.48□□□□□ -1.05
YPT6YLR262C TUM1Q08686 304 aaKnown RBP8.48□□□□□ -1.05
YPT6YLR262C ORC6P38826 435 aa8.46□□□□□ -1.06
YPT6YLR262C CKB1P43639 278 aa8.46□□□□□ -1.06
YPT6YLR262C RAS1P01119 309 aa8.42□□□□□ -1.06
YPT6YLR262C NUD1P32336 851 aa8.41□□□□□ -1.06
YPT6YLR262C NPL4P33755 580 aa8.41□□□□□ -1.06
YPT6YLR262C BUD20Q08004 166 aaPredicted RBP8.41□□□□□ -1.06
YPT6YLR262C PRT1P06103 763 aaKnown RBP8.4□□□□□ -1.06
YPT6YLR262C PBS2P08018 668 aa8.4□□□□□ -1.06
YPT6YLR262C AMS1P22855 1083 aa8.4□□□□□ -1.06
YPT6YLR262C MVP1P40959 511 aaKnown RBP8.4□□□□□ -1.06
YPT6YLR262C MRF1P30775 413 aaPredicted RBP8.39□□□□□ -1.07
YPT6YLR262C STR2P47164 639 aa8.39□□□□□ -1.07
YPT6YLR262C ISM1P48526 1002 aa8.39□□□□□ -1.07
YPT6YLR262C SRC1Q03707 834 aa8.38□□□□□ -1.07
YPT6YLR262C YEL077CQ3E7X8 1277 aa8.37□□□□□ -1.07
YPT6YLR262C RGR1P19263 1082 aa8.35□□□□□ -1.07
YPT6YLR262C SDH2P21801 266 aa8.35□□□□□ -1.07
YPT6YLR262C YPR109WQ06104 294 aa8.35□□□□□ -1.07
YPT6YLR262C GCD11P32481 527 aaKnown RBP8.33□□□□□ -1.08
YPT6YLR262C SAS10Q12136 610 aaPredicted RBP8.32□□□□□ -1.08
YPT6YLR262C MAM3Q12296 706 aa8.31□□□□□ -1.08
YPT6YLR262C ERG12P07277 443 aa8.3□□□□□ -1.08
YPT6YLR262C PSE1P32337 1089 aaKnown RBP8.28□□□□□ -1.08
YPT6YLR262C SPT16P32558 1035 aaKnown RBP8.27□□□□□ -1.09
YPT6YLR262C TY1A-DR4O74302 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-HP0C2I4 478 aaKnown RBP8.26□□□□□ -1.09
YPT6YLR262C TY1A-AP0CX57 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-PR1P0CX58 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-ORP0CX59 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-PR2P0CX60 440 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms