RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YNL035CP53962 389 aaKnown RBP8.69□□□□□ -1.02
ATG38YLR211C SET1P38827 1080 aaKnown RBP8.68□□□□□ -1.02
ATG38YLR211C NST1P53935 1240 aa8.68□□□□□ -1.02
ATG38YLR211C NOP53Q12080 455 aaKnown RBP8.68□□□□□ -1.02
ATG38YLR211C SOL3P38858 249 aa8.67□□□□□ -1.02
ATG38YLR211C YEL023CP39992 682 aa8.65□□□□□ -1.02
ATG38YLR211C SEC61P32915 480 aa8.64□□□□□ -1.03
ATG38YLR211C JIP4Q03361 876 aa8.64□□□□□ -1.03
ATG38YLR211C NCR1Q12200 1170 aa8.63□□□□□ -1.03
ATG38YLR211C PTC4P38089 393 aa8.62□□□□□ -1.03
ATG38YLR211C DMA1P38823 416 aa8.57□□□□□ -1.04
ATG38YLR211C ILV3P39522 585 aaKnown RBP8.57□□□□□ -1.04
ATG38YLR211C YJL171CP46992 396 aa8.57□□□□□ -1.04
ATG38YLR211C YGR273CP53329 174 aa8.55□□□□□ -1.04
ATG38YLR211C BMT6Q12291 365 aa8.54□□□□□ -1.04
ATG38YLR211C MPH3P0CE00 602 aa8.52□□□□□ -1.05
ATG38YLR211C YDL129WQ07555 291 aa8.5□□□□□ -1.05
ATG38YLR211C AI4P03878 556 aa8.49□□□□□ -1.05
ATG38YLR211C YPR148CQ06523 435 aa8.49□□□□□ -1.05
ATG38YLR211C SAP30P38429 201 aa8.48□□□□□ -1.05
ATG38YLR211C TFG1P41895 735 aaPredicted RBP8.48□□□□□ -1.05
ATG38YLR211C PML39Q03760 334 aa8.48□□□□□ -1.05
ATG38YLR211C YDR344CQ05510 147 aa8.46□□□□□ -1.06
ATG38YLR211C MID1P41821 548 aa8.45□□□□□ -1.06
ATG38YLR211C UBP14P38237 781 aaKnown RBP8.43□□□□□ -1.06
ATG38YLR211C KEX1P09620 729 aa8.42□□□□□ -1.06
ATG38YLR211C IFH1P39520 1085 aa8.42□□□□□ -1.06
ATG38YLR211C YLR326WQ06170 240 aaKnown RBP8.42□□□□□ -1.06
ATG38YLR211C VHR2P40041 505 aa8.4□□□□□ -1.06
ATG38YLR211C VPS70P47161 811 aa8.39□□□□□ -1.07
ATG38YLR211C SLI15P38283 698 aa8.38□□□□□ -1.07
ATG38YLR211C YDR090CQ03193 310 aa8.35□□□□□ -1.07
ATG38YLR211C PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
ATG38YLR211C SAS10Q12136 610 aaPredicted RBP8.34□□□□□ -1.07
ATG38YLR211C PRE3P38624 215 aa8.32□□□□□ -1.08
ATG38YLR211C REF2P42073 533 aaPredicted RBP8.32□□□□□ -1.08
ATG38YLR211C MPC54Q08550 464 aa8.32□□□□□ -1.08
ATG38YLR211C PEX29Q03370 554 aa8.31□□□□□ -1.08
ATG38YLR211C ARH1P48360 493 aa8.3□□□□□ -1.08
ATG38YLR211C CHL1P22516 861 aaPredicted RBP8.29□□□□□ -1.08
ATG38YLR211C RAD54P32863 898 aa8.28□□□□□ -1.08
ATG38YLR211C CDC73Q06697 393 aa8.27□□□□□ -1.09
ATG38YLR211C ELP4Q02884 456 aaKnown RBP8.26□□□□□ -1.09
ATG38YLR211C DPL1Q05567 589 aa8.24□□□□□ -1.09
ATG38YLR211C NMA111P53920 997 aa8.23□□□□□ -1.09
ATG38YLR211C HAP5Q02516 242 aa8.22□□□□□ -1.09
ATG38YLR211C CKB1P43639 278 aa8.21□□□□□ -1.1
ATG38YLR211C COX6P00427 148 aa8.2□□□□□ -1.1
ATG38YLR211C PBS2P08018 668 aa8.17□□□□□ -1.1
ATG38YLR211C SPT23P35210 1082 aa8.17□□□□□ -1.1
ATG38YLR211C KIC1P38692 1080 aa8.17□□□□□ -1.1
ATG38YLR211C MAK21Q12176 1025 aaKnown RBP8.17□□□□□ -1.1
ATG38YLR211C GAP1P19145 602 aaPredicted RBP8.16□□□□□ -1.1
ATG38YLR211C BNI4P53858 892 aa8.16□□□□□ -1.1
ATG38YLR211C ISU2Q12056 156 aa8.16□□□□□ -1.1
ATG38YLR211C BCK2P33306 851 aa8.15□□□□□ -1.1
ATG38YLR211C ORC6P38826 435 aa8.15□□□□□ -1.1
ATG38YLR211C RQC2Q12532 1038 aaKnown RBP8.15□□□□□ -1.1
ATG38YLR211C VRP1P37370 817 aa8.12□□□□□ -1.11
ATG38YLR211C RAM1P22007 431 aa8.11□□□□□ -1.11
ATG38YLR211C PDR1P12383 1068 aa8.1□□□□□ -1.11
ATG38YLR211C DSF2P38213 736 aa8.1□□□□□ -1.11
ATG38YLR211C YML082WQ04533 649 aaKnown RBP8.1□□□□□ -1.11
ATG38YLR211C YPR015CQ12531 247 aa8.1□□□□□ -1.11
ATG38YLR211C PTC2P39966 464 aaKnown RBP8.09□□□□□ -1.11
ATG38YLR211C CSC1Q06538 782 aa8.06□□□□□ -1.12
ATG38YLR211C RPP1BP10622 106 aaKnown RBP8.05□□□□□ -1.12
ATG38YLR211C MVP1P40959 511 aaKnown RBP8.04□□□□□ -1.12
ATG38YLR211C MAM3Q12296 706 aa8.04□□□□□ -1.12
ATG38YLR211C RGR1P19263 1082 aa8.03□□□□□ -1.12
ATG38YLR211C SPB4P25808 606 aaPredicted RBP8.03□□□□□ -1.12
ATG38YLR211C IES2P40154 320 aa8.03□□□□□ -1.12
ATG38YLR211C NUP42P49686 430 aaKnown RBP8.03□□□□□ -1.12
ATG38YLR211C TFB4Q12004 338 aa8.03□□□□□ -1.12
ATG38YLR211C YRR1Q12172 810 aa8.03□□□□□ -1.12
ATG38YLR211C XDJ1P39102 459 aa8.01□□□□□ -1.13
ATG38YLR211C PEX21P50091 288 aa8□□□□□ -1.13
ATG38YLR211C TUM1Q08686 304 aaKnown RBP8□□□□□ -1.13
ATG38YLR211C YPR109WQ06104 294 aa7.98□□□□□ -1.13
ATG38YLR211C DIT2P21595 489 aa7.97□□□□□ -1.13
ATG38YLR211C PSE1P32337 1089 aaKnown RBP7.96□□□□□ -1.14
ATG38YLR211C STR2P47164 639 aa7.96□□□□□ -1.14
ATG38YLR211C ISM1P48526 1002 aa7.94□□□□□ -1.14
ATG38YLR211C NUD1P32336 851 aa7.93□□□□□ -1.14
ATG38YLR211C BUD20Q08004 166 aaPredicted RBP7.93□□□□□ -1.14
ATG38YLR211C SDH2P21801 266 aa7.88□□□□□ -1.15
ATG38YLR211C TY1A-DR4O74302 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-HP0C2I4 478 aaKnown RBP7.87□□□□□ -1.15
ATG38YLR211C TY1A-AP0CX57 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-PR1P0CX58 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-ORP0CX59 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-PR2P0CX60 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-DR5P0CX65 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-ER2P0CX66 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-GR3P0CX67 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-LR1P0CX68 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-MR2P0CX69 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-JR2P47099 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-DR1Q03856 440 aa7.87□□□□□ -1.15
ATG38YLR211C TY1A-ML1Q04706 440 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms