RNA–Protein interactions for RNA: YLR066W

SPC3, Transcript of Subunit of signal peptidase complex, yeastyeast

Gene SPC3, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC3YLR066W SPB4P25808 606 aaPredicted RBP8.4□□□□□ -1.06
SPC3YLR066W COQ8P27697 501 aa8.39□□□□□ -1.07
SPC3YLR066W RTG1P32607 177 aa8.34□□□□□ -1.07
SPC3YLR066W BMT6Q12291 365 aa8.32□□□□□ -1.08
SPC3YLR066W MIF2P35201 549 aa8.31□□□□□ -1.08
SPC3YLR066W DSF2P38213 736 aa8.31□□□□□ -1.08
SPC3YLR066W YNL035CP53962 389 aaKnown RBP8.29□□□□□ -1.08
SPC3YLR066W GYP5Q12344 894 aa8.29□□□□□ -1.08
SPC3YLR066W PBS2P08018 668 aa8.28□□□□□ -1.08
SPC3YLR066W EDS1P38073 919 aa8.28□□□□□ -1.08
SPC3YLR066W ABP1P15891 592 aaKnown RBP8.25□□□□□ -1.09
SPC3YLR066W SEC61P32915 480 aa8.25□□□□□ -1.09
SPC3YLR066W DCW1P36091 449 aa8.24□□□□□ -1.09
SPC3YLR066W REF2P42073 533 aaPredicted RBP8.24□□□□□ -1.09
SPC3YLR066W NCR1Q12200 1170 aa8.24□□□□□ -1.09
SPC3YLR066W DAN4P47179 1161 aa8.23□□□□□ -1.09
SPC3YLR066W HTA1P04911 132 aaKnown RBP8.22□□□□□ -1.09
SPC3YLR066W HTA2P04912 132 aa8.22□□□□□ -1.09
SPC3YLR066W PTC3P34221 468 aaKnown RBP8.22□□□□□ -1.09
SPC3YLR066W YNR021WP53723 404 aaKnown RBP8.2□□□□□ -1.1
SPC3YLR066W MAK21Q12176 1025 aaKnown RBP8.2□□□□□ -1.1
SPC3YLR066W MAM3Q12296 706 aa8.2□□□□□ -1.1
SPC3YLR066W JIP4Q03361 876 aa8.19□□□□□ -1.1
SPC3YLR066W YEL023CP39992 682 aa8.17□□□□□ -1.1
SPC3YLR066W GRE2Q12068 342 aaKnown RBP8.17□□□□□ -1.1
SPC3YLR066W IES2P40154 320 aa8.13□□□□□ -1.11
SPC3YLR066W PTC4P38089 393 aa8.12□□□□□ -1.11
SPC3YLR066W DMA2P53924 522 aa8.12□□□□□ -1.11
SPC3YLR066W COX6P00427 148 aa8.11□□□□□ -1.11
SPC3YLR066W AIM7Q12156 149 aa8.11□□□□□ -1.11
SPC3YLR066W GUT1P32190 709 aa8.1□□□□□ -1.11
SPC3YLR066W SAP30P38429 201 aa8.1□□□□□ -1.11
SPC3YLR066W ATH1P48016 1211 aa8.1□□□□□ -1.11
SPC3YLR066W NST1P53935 1240 aa8.1□□□□□ -1.11
SPC3YLR066W YDL129WQ07555 291 aa8.1□□□□□ -1.11
SPC3YLR066W TFG1P41895 735 aaPredicted RBP8.09□□□□□ -1.11
SPC3YLR066W NUP42P49686 430 aaKnown RBP8.08□□□□□ -1.12
SPC3YLR066W KIN1P13185 1064 aa8.07□□□□□ -1.12
SPC3YLR066W SOL3P38858 249 aa8.07□□□□□ -1.12
SPC3YLR066W GLC3P32775 704 aa8.06□□□□□ -1.12
SPC3YLR066W DIT2P21595 489 aa8.04□□□□□ -1.12
SPC3YLR066W VHR2P40041 505 aa8.03□□□□□ -1.12
SPC3YLR066W YDR344CQ05510 147 aa8.03□□□□□ -1.12
SPC3YLR066W UBP14P38237 781 aaKnown RBP8.01□□□□□ -1.13
SPC3YLR066W YGR273CP53329 174 aa8.01□□□□□ -1.13
SPC3YLR066W YDR090CQ03193 310 aa8.01□□□□□ -1.13
SPC3YLR066W ILV3P39522 585 aaKnown RBP8□□□□□ -1.13
SPC3YLR066W HGH1P48362 394 aaKnown RBP8□□□□□ -1.13
SPC3YLR066W PML39Q03760 334 aa8□□□□□ -1.13
SPC3YLR066W YLR326WQ06170 240 aaKnown RBP8□□□□□ -1.13
SPC3YLR066W KIC1P38692 1080 aa7.99□□□□□ -1.13
SPC3YLR066W ATF2P53296 535 aa7.98□□□□□ -1.13
SPC3YLR066W PRE3P38624 215 aa7.97□□□□□ -1.13
SPC3YLR066W CHL1P22516 861 aaPredicted RBP7.96□□□□□ -1.14
SPC3YLR066W RAD54P32863 898 aa7.96□□□□□ -1.14
SPC3YLR066W MPH3P0CE00 602 aa7.95□□□□□ -1.14
SPC3YLR066W MID1P41821 548 aa7.95□□□□□ -1.14
SPC3YLR066W AI4P03878 556 aa7.94□□□□□ -1.14
SPC3YLR066W KEX1P09620 729 aa7.94□□□□□ -1.14
SPC3YLR066W RLF2Q12495 606 aa7.94□□□□□ -1.14
SPC3YLR066W PSE1P32337 1089 aaKnown RBP7.93□□□□□ -1.14
SPC3YLR066W BCK2P33306 851 aa7.91□□□□□ -1.14
SPC3YLR066W PCS60P38137 543 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
SPC3YLR066W GUA1P38625 525 aaKnown RBP7.88□□□□□ -1.15
SPC3YLR066W HPC2Q01448 625 aa7.88□□□□□ -1.15
SPC3YLR066W ORC6P38826 435 aa7.86□□□□□ -1.15
SPC3YLR066W ARH1P48360 493 aa7.86□□□□□ -1.15
SPC3YLR066W ELP4Q02884 456 aaKnown RBP7.85□□□□□ -1.15
SPC3YLR066W SSA2P10592 639 aaKnown RBP7.82□□□□□ -1.16
SPC3YLR066W RPP1BP10622 106 aaKnown RBP7.81□□□□□ -1.16
SPC3YLR066W CLB5P30283 435 aa7.81□□□□□ -1.16
SPC3YLR066W PEX29Q03370 554 aa7.81□□□□□ -1.16
SPC3YLR066W SLI15P38283 698 aa7.8□□□□□ -1.16
SPC3YLR066W MPC54Q08550 464 aa7.8□□□□□ -1.16
SPC3YLR066W BRL1P38770 471 aa7.79□□□□□ -1.16
SPC3YLR066W TEA1P47988 759 aa7.79□□□□□ -1.16
SPC3YLR066W VRP1P37370 817 aa7.78□□□□□ -1.16
SPC3YLR066W CSN12P47130 423 aa7.76□□□□□ -1.17
SPC3YLR066W HAP5Q02516 242 aa7.76□□□□□ -1.17
SPC3YLR066W TFB3Q03290 321 aa7.76□□□□□ -1.17
SPC3YLR066W CSC1Q06538 782 aa7.76□□□□□ -1.17
SPC3YLR066W GAP1P19145 602 aaPredicted RBP7.75□□□□□ -1.17
SPC3YLR066W RGR1P19263 1082 aa7.75□□□□□ -1.17
SPC3YLR066W SPT23P35210 1082 aa7.74□□□□□ -1.17
SPC3YLR066W MVP1P40959 511 aaKnown RBP7.73□□□□□ -1.17
SPC3YLR066W XDJ1P39102 459 aa7.72□□□□□ -1.17
SPC3YLR066W BNI4P53858 892 aa7.72□□□□□ -1.17
SPC3YLR066W DPL1Q05567 589 aa7.71□□□□□ -1.18
SPC3YLR066W TFB4Q12004 338 aa7.71□□□□□ -1.18
SPC3YLR066W NMA111P53920 997 aa7.7□□□□□ -1.18
SPC3YLR066W CDC73Q06697 393 aa7.68□□□□□ -1.18
SPC3YLR066W PEX21P50091 288 aa7.66□□□□□ -1.18
SPC3YLR066W HST2P53686 357 aa7.66□□□□□ -1.18
SPC3YLR066W YMR196WQ04336 1088 aa7.66□□□□□ -1.18
SPC3YLR066W PKC1P24583 1151 aa7.65□□□□□ -1.18
SPC3YLR066W KTR1P27810 393 aaKnown RBP7.65□□□□□ -1.18
SPC3YLR066W GLN1P32288 370 aaKnown RBP7.65□□□□□ -1.18
SPC3YLR066W PTC2P39966 464 aaKnown RBP7.65□□□□□ -1.18
SPC3YLR066W NIS1P53939 407 aa7.65□□□□□ -1.18
SPC3YLR066W YML082WQ04533 649 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms