RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE8	YLR047C	TGL3	P40308	642 aa		5.11	□□□□□ -1.59
FRE8	YLR047C	EDS1	P38073	919 aa		5.11	□□□□□ -1.59
FRE8	YLR047C	NUP42	P49686	430 aa	Known RBP	5.11	□□□□□ -1.59
FRE8	YLR047C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
FRE8	YLR047C	MIF2	P35201	549 aa		5.09	□□□□□ -1.59
FRE8	YLR047C	REF2	P42073	533 aa	Predicted RBP	5.09	□□□□□ -1.59
FRE8	YLR047C	AIM7	Q12156	149 aa		5.09	□□□□□ -1.59
FRE8	YLR047C	BPT1	P14772	1559 aa		5.09	□□□□□ -1.59
FRE8	YLR047C	GUA1	P38625	525 aa	Known RBP	5.09	□□□□□ -1.59
FRE8	YLR047C	STS1	P38637	319 aa		5.09	□□□□□ -1.59
FRE8	YLR047C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
FRE8	YLR047C	NOP53	Q12080	455 aa	Known RBP	5.07	□□□□□ -1.6
FRE8	YLR047C	YFR006W	P43590	535 aa		5.06	□□□□□ -1.6
FRE8	YLR047C	SSN2	P38931	1420 aa		5.06	□□□□□ -1.6
FRE8	YLR047C	DBP1	P24784	617 aa	Known RBP	5.05	□□□□□ -1.6
FRE8	YLR047C	YOR238W	Q08634	303 aa		5.05	□□□□□ -1.6
FRE8	YLR047C	SIN3	P22579	1536 aa		5.03	□□□□□ -1.6
FRE8	YLR047C	COX6	P00427	148 aa		5.03	□□□□□ -1.6
FRE8	YLR047C	YAP5	P40574	245 aa		5.03	□□□□□ -1.6
FRE8	YLR047C	HGH1	P48362	394 aa	Known RBP	5.03	□□□□□ -1.6
FRE8	YLR047C	SKI3	P17883	1432 aa	Known RBP	5.02	□□□□□ -1.61
FRE8	YLR047C	TAF2	P23255	1407 aa		5.02	□□□□□ -1.61
FRE8	YLR047C	SSK2	P53599	1579 aa		5.02	□□□□□ -1.61
FRE8	YLR047C	PTC3	P34221	468 aa	Known RBP	5.01	□□□□□ -1.61
FRE8	YLR047C	ATF2	P53296	535 aa		5.01	□□□□□ -1.61
FRE8	YLR047C	MST1	P07236	462 aa		5.01	□□□□□ -1.61
FRE8	YLR047C	MAK21	Q12176	1025 aa	Known RBP	5.01	□□□□□ -1.61
FRE8	YLR047C	YCF1	P39109	1515 aa	Known RBP	5	□□□□□ -1.61
FRE8	YLR047C	PIB1	Q06651	286 aa		5	□□□□□ -1.61
FRE8	YLR047C	TFB3	Q03290	321 aa		4.99	□□□□□ -1.61
FRE8	YLR047C	HPC2	Q01448	625 aa		4.98	□□□□□ -1.61
FRE8	YLR047C	YDR090C	Q03193	310 aa		4.98	□□□□□ -1.61
FRE8	YLR047C	ESP1	Q03018	1630 aa		4.98	□□□□□ -1.61
FRE8	YLR047C	VHR2	P40041	505 aa		4.97	□□□□□ -1.61
FRE8	YLR047C	VMA1	P17255	1071 aa	Known RBP	4.96	□□□□□ -1.61
FRE8	YLR047C	UBP14	P38237	781 aa	Known RBP	4.96	□□□□□ -1.61
FRE8	YLR047C	PKC1	P24583	1151 aa		4.96	□□□□□ -1.62
FRE8	YLR047C	UFD4	P33202	1483 aa		4.94	□□□□□ -1.62
FRE8	YLR047C	YLR326W	Q06170	240 aa	Known RBP	4.93	□□□□□ -1.62
FRE8	YLR047C	BRL1	P38770	471 aa		4.92	□□□□□ -1.62
FRE8	YLR047C	SCC2	Q04002	1493 aa		4.91	□□□□□ -1.62
FRE8	YLR047C	YPK9	Q12697	1472 aa		4.91	□□□□□ -1.62
FRE8	YLR047C	SAM3	Q08986	587 aa		4.91	□□□□□ -1.62
FRE8	YLR047C	GLN1	P32288	370 aa	Known RBP	4.9	□□□□□ -1.63
FRE8	YLR047C	BIM1	P40013	344 aa		4.9	□□□□□ -1.63
FRE8	YLR047C	CSN12	P47130	423 aa		4.9	□□□□□ -1.63
FRE8	YLR047C	YML020W	Q03722	664 aa		4.9	□□□□□ -1.63
FRE8	YLR047C	SUB2	Q07478	446 aa	Known RBP	4.9	□□□□□ -1.63
FRE8	YLR047C	MYO2	P19524	1574 aa	Known RBP	4.89	□□□□□ -1.63
FRE8	YLR047C	ATH1	P48016	1211 aa		4.89	□□□□□ -1.63
FRE8	YLR047C	RPO31	P04051	1460 aa		4.89	□□□□□ -1.63
FRE8	YLR047C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
FRE8	YLR047C	ATG32	P40458	529 aa		4.88	□□□□□ -1.63
FRE8	YLR047C	YJL007C	P47080	104 aa		4.88	□□□□□ -1.63
FRE8	YLR047C	CDC25	P04821	1589 aa		4.88	□□□□□ -1.63
FRE8	YLR047C	GUT1	P32190	709 aa		4.88	□□□□□ -1.63
FRE8	YLR047C	PSE1	P32337	1089 aa	Known RBP	4.88	□□□□□ -1.63
FRE8	YLR047C	YGR273C	P53329	174 aa		4.88	□□□□□ -1.63
FRE8	YLR047C	GRE2	Q12068	342 aa	Known RBP	4.88	□□□□□ -1.63
FRE8	YLR047C	SSA2	P10592	639 aa	Known RBP	4.87	□□□□□ -1.63
FRE8	YLR047C	KTR1	P27810	393 aa	Known RBP	4.87	□□□□□ -1.63
FRE8	YLR047C	KIC1	P38692	1080 aa		4.87	□□□□□ -1.63
FRE8	YLR047C	CHD1	P32657	1468 aa		4.87	□□□□□ -1.63
FRE8	YLR047C	KEX1	P09620	729 aa		4.87	□□□□□ -1.63
FRE8	YLR047C	SSA1	P10591	642 aa	Known RBP	4.87	□□□□□ -1.63
FRE8	YLR047C	SOL3	P38858	249 aa		4.87	□□□□□ -1.63
FRE8	YLR047C	MET5	P47169	1442 aa		4.87	□□□□□ -1.63
FRE8	YLR047C	DNF1	P32660	1571 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	GEF1	P37020	779 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	ESC1	Q03661	1658 aa	Known RBP	4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-LR1	P0C2J3	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-F	P0CX63	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-GR2	P0CX64	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-C	P25384	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-DR2	Q03494	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY1B-DR1	Q03855	1755 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-DR3	Q07791	1770 aa	Known RBP	4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-OR1	Q12113	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-DR1	Q12472	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	TY2B-OR2	Q12501	1770 aa		4.86	□□□□□ -1.63
FRE8	YLR047C	RAD54	P32863	898 aa		4.85	□□□□□ -1.63
FRE8	YLR047C	SLX8	P40072	274 aa		4.85	□□□□□ -1.63
FRE8	YLR047C	TYW1	Q08960	810 aa	Known RBP	4.85	□□□□□ -1.63
FRE8	YLR047C	NOP8	Q08287	484 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE8	YLR047C	ERG12	P07277	443 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	ORC6	P38826	435 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	GTT3	P39996	337 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	YOL036W	Q08206	761 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	GYP5	Q12344	894 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	TY1B-BR	Q12193	1756 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	TY1B-GR3	Q12316	1755 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	TY1B-OR	Q92393	1755 aa		4.84	□□□□□ -1.63
FRE8	YLR047C	TEA1	P47988	759 aa		4.83	□□□□□ -1.64
FRE8	YLR047C	NST1	P53935	1240 aa		4.83	□□□□□ -1.64
FRE8	YLR047C	TIF1	P10081	395 aa	Known RBP	4.82	□□□□□ -1.64
FRE8	YLR047C	SET4	P42948	560 aa		4.82	□□□□□ -1.64
FRE8	YLR047C	PAN1	P32521	1480 aa		4.82	□□□□□ -1.64
FRE8	YLR047C	LTE1	P07866	1435 aa		4.82	□□□□□ -1.64
FRE8	YLR047C	RKR1	Q04781	1562 aa		4.82	□□□□□ -1.64
FRE8	YLR047C	RGR1	P19263	1082 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms