RNA–Protein interactions for RNA: YLR009W

RLP24, Transcript of Essential protein required for ribosomal large subunit biogenesis, yeastyeast

Gene RLP24, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RLP24YLR009W GUT1P32190 709 aa8.34□□□□□ -1.07
RLP24YLR009W SEC61P32915 480 aa8.34□□□□□ -1.07
RLP24YLR009W JIP4Q03361 876 aa8.34□□□□□ -1.07
RLP24YLR009W NCR1Q12200 1170 aa8.34□□□□□ -1.07
RLP24YLR009W YEL023CP39992 682 aa8.33□□□□□ -1.08
RLP24YLR009W NOP53Q12080 455 aaKnown RBP8.33□□□□□ -1.08
RLP24YLR009W DAN4P47179 1161 aa8.32□□□□□ -1.08
RLP24YLR009W PTC4P38089 393 aa8.3□□□□□ -1.08
RLP24YLR009W BMT6Q12291 365 aa8.3□□□□□ -1.08
RLP24YLR009W SET1P38827 1080 aaKnown RBP8.28□□□□□ -1.08
RLP24YLR009W TFG1P41895 735 aaPredicted RBP8.28□□□□□ -1.08
RLP24YLR009W SOL3P38858 249 aa8.22□□□□□ -1.09
RLP24YLR009W NST1P53935 1240 aa8.22□□□□□ -1.09
RLP24YLR009W YDL129WQ07555 291 aa8.2□□□□□ -1.1
RLP24YLR009W SAP30P38429 201 aa8.18□□□□□ -1.1
RLP24YLR009W YGR273CP53329 174 aa8.17□□□□□ -1.1
RLP24YLR009W AI4P03878 556 aa8.15□□□□□ -1.1
RLP24YLR009W MPH3P0CE00 602 aa8.15□□□□□ -1.1
RLP24YLR009W PML39Q03760 334 aa8.15□□□□□ -1.1
RLP24YLR009W IFH1P39520 1085 aa8.11□□□□□ -1.11
RLP24YLR009W ILV3P39522 585 aaKnown RBP8.11□□□□□ -1.11
RLP24YLR009W DMA1P38823 416 aa8.09□□□□□ -1.11
RLP24YLR009W MID1P41821 548 aa8.08□□□□□ -1.12
RLP24YLR009W YPR148CQ06523 435 aa8.05□□□□□ -1.12
RLP24YLR009W KEX1P09620 729 aa8.04□□□□□ -1.12
RLP24YLR009W CHL1P22516 861 aaPredicted RBP8.03□□□□□ -1.12
RLP24YLR009W PRE3P38624 215 aa8.03□□□□□ -1.12
RLP24YLR009W VHR2P40041 505 aa8.02□□□□□ -1.13
RLP24YLR009W PEX29Q03370 554 aa8.02□□□□□ -1.13
RLP24YLR009W YDR344CQ05510 147 aa8.02□□□□□ -1.13
RLP24YLR009W UBP14P38237 781 aaKnown RBP8.01□□□□□ -1.13
RLP24YLR009W SLI15P38283 698 aa8.01□□□□□ -1.13
RLP24YLR009W YLR326WQ06170 240 aaKnown RBP8.01□□□□□ -1.13
RLP24YLR009W VPS70P47161 811 aa8□□□□□ -1.13
RLP24YLR009W ELP4Q02884 456 aaKnown RBP7.99□□□□□ -1.13
RLP24YLR009W ARH1P48360 493 aa7.98□□□□□ -1.13
RLP24YLR009W MPC54Q08550 464 aa7.96□□□□□ -1.14
RLP24YLR009W REF2P42073 533 aaPredicted RBP7.95□□□□□ -1.14
RLP24YLR009W RAD54P32863 898 aa7.94□□□□□ -1.14
RLP24YLR009W PCS60P38137 543 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
RLP24YLR009W HAP5Q02516 242 aa7.92□□□□□ -1.14
RLP24YLR009W YDR090CQ03193 310 aa7.92□□□□□ -1.14
RLP24YLR009W DPL1Q05567 589 aa7.92□□□□□ -1.14
RLP24YLR009W BCK2P33306 851 aa7.9□□□□□ -1.14
RLP24YLR009W KIC1P38692 1080 aa7.9□□□□□ -1.14
RLP24YLR009W NMA111P53920 997 aa7.9□□□□□ -1.14
RLP24YLR009W SPT23P35210 1082 aa7.89□□□□□ -1.15
RLP24YLR009W CDC73Q06697 393 aa7.88□□□□□ -1.15
RLP24YLR009W SAS10Q12136 610 aaPredicted RBP7.87□□□□□ -1.15
RLP24YLR009W CKB1P43639 278 aa7.86□□□□□ -1.15
RLP24YLR009W BNI4P53858 892 aa7.86□□□□□ -1.15
RLP24YLR009W RPP1BP10622 106 aaKnown RBP7.84□□□□□ -1.15
RLP24YLR009W VRP1P37370 817 aa7.84□□□□□ -1.15
RLP24YLR009W ISU2Q12056 156 aa7.84□□□□□ -1.15
RLP24YLR009W MAK21Q12176 1025 aaKnown RBP7.84□□□□□ -1.15
RLP24YLR009W COX6P00427 148 aa7.83□□□□□ -1.16
RLP24YLR009W RQC2Q12532 1038 aaKnown RBP7.83□□□□□ -1.16
RLP24YLR009W PTC2P39966 464 aaKnown RBP7.81□□□□□ -1.16
RLP24YLR009W PBS2P08018 668 aa7.79□□□□□ -1.16
RLP24YLR009W YML082WQ04533 649 aaKnown RBP7.78□□□□□ -1.16
RLP24YLR009W ORC6P38826 435 aa7.75□□□□□ -1.17
RLP24YLR009W XDJ1P39102 459 aa7.75□□□□□ -1.17
RLP24YLR009W GAP1P19145 602 aaPredicted RBP7.74□□□□□ -1.17
RLP24YLR009W PEX21P50091 288 aa7.73□□□□□ -1.17
RLP24YLR009W CSC1Q06538 782 aa7.73□□□□□ -1.17
RLP24YLR009W PDR1P12383 1068 aa7.72□□□□□ -1.17
RLP24YLR009W RAM1P22007 431 aa7.72□□□□□ -1.17
RLP24YLR009W TFB4Q12004 338 aa7.71□□□□□ -1.18
RLP24YLR009W YPR015CQ12531 247 aa7.71□□□□□ -1.18
RLP24YLR009W YRR1Q12172 810 aa7.7□□□□□ -1.18
RLP24YLR009W MAM3Q12296 706 aa7.7□□□□□ -1.18
RLP24YLR009W DSF2P38213 736 aa7.69□□□□□ -1.18
RLP24YLR009W SPB4P25808 606 aaPredicted RBP7.68□□□□□ -1.18
RLP24YLR009W TUM1Q08686 304 aaKnown RBP7.68□□□□□ -1.18
RLP24YLR009W MVP1P40959 511 aaKnown RBP7.66□□□□□ -1.18
RLP24YLR009W RGR1P19263 1082 aa7.64□□□□□ -1.19
RLP24YLR009W IES2P40154 320 aa7.64□□□□□ -1.19
RLP24YLR009W PSE1P32337 1089 aaKnown RBP7.61□□□□□ -1.19
RLP24YLR009W YPR109WQ06104 294 aa7.61□□□□□ -1.19
RLP24YLR009W GYP1Q08484 637 aa7.61□□□□□ -1.19
RLP24YLR009W NUD1P32336 851 aa7.6□□□□□ -1.19
RLP24YLR009W NUP42P49686 430 aaKnown RBP7.59□□□□□ -1.19
RLP24YLR009W DPS1P04802 557 aaKnown RBP7.58□□□□□ -1.2
RLP24YLR009W STR2P47164 639 aa7.58□□□□□ -1.2
RLP24YLR009W BUD20Q08004 166 aaPredicted RBP7.58□□□□□ -1.2
RLP24YLR009W ISM1P48526 1002 aa7.57□□□□□ -1.2
RLP24YLR009W NPL4P33755 580 aa7.56□□□□□ -1.2
RLP24YLR009W SAS4Q04003 481 aa7.56□□□□□ -1.2
RLP24YLR009W DIT2P21595 489 aa7.54□□□□□ -1.2
RLP24YLR009W PRT1P06103 763 aaKnown RBP7.53□□□□□ -1.2
RLP24YLR009W CLB5P30283 435 aa7.52□□□□□ -1.21
RLP24YLR009W GCD11P32481 527 aaKnown RBP7.51□□□□□ -1.21
RLP24YLR009W TY1A-DR4O74302 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-HP0C2I4 478 aaKnown RBP7.48□□□□□ -1.21
RLP24YLR009W TY1A-AP0CX57 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-PR1P0CX58 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-ORP0CX59 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-PR2P0CX60 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-DR5P0CX65 440 aa7.48□□□□□ -1.21
RLP24YLR009W TY1A-ER2P0CX66 440 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms