RNA–Protein interactions for RNA: YKL216W

URA1, Transcript of Dihydroorotate dehydrogenase, yeastyeast

Gene URA1, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URA1YKL216W TY1B-GR1Q12141 1755 aa12.28□□□□□ -0.44
URA1YKL216W TY1B-BLQ12490 1755 aa12.28□□□□□ -0.44
URA1YKL216W SPP41P38904 1435 aa12.27□□□□□ -0.45
URA1YKL216W SMC4Q12267 1418 aa12.27□□□□□ -0.45
URA1YKL216W NTE1Q04958 1679 aa12.26□□□□□ -0.45
URA1YKL216W DNF2Q12675 1612 aa12.22□□□□□ -0.45
URA1YKL216W YOR1P53049 1477 aa12.21□□□□□ -0.45
URA1YKL216W RPO21P04050 1733 aaKnown RBP12.21□□□□□ -0.45
URA1YKL216W TSC11P40061 1430 aa12.19□□□□□ -0.46
URA1YKL216W VTH1P40438 1549 aa12.16□□□□□ -0.46
URA1YKL216W VTH2P40890 1549 aa12.16□□□□□ -0.46
URA1YKL216W STU1P38198 1513 aa12.15□□□□□ -0.46
URA1YKL216W NUP170P38181 1502 aa12.11□□□□□ -0.47
URA1YKL216W MYO4P32492 1471 aa12.08□□□□□ -0.47
URA1YKL216W SNT2P53127 1403 aa12.06□□□□□ -0.48
URA1YKL216W SPO14P36126 1683 aa12.03□□□□□ -0.48
URA1YKL216W MET10P39692 1035 aa12.01□□□□□ -0.49
URA1YKL216W YOR093CQ12275 1648 aa12□□□□□ -0.49
URA1YKL216W ULS1Q08562 1619 aa11.99□□□□□ -0.49
URA1YKL216W SNQ2P32568 1501 aaKnown RBP11.97□□□□□ -0.49
URA1YKL216W DOP1Q03921 1698 aa11.94□□□□□ -0.5
URA1YKL216W PDR12Q02785 1511 aa11.9□□□□□ -0.5
URA1YKL216W STH1P32597 1359 aa11.9□□□□□ -0.5
URA1YKL216W TRM3Q07527 1436 aa11.88□□□□□ -0.51
URA1YKL216W RTT106P40161 455 aa11.85□□□□□ -0.51
URA1YKL216W PDR10P51533 1564 aa11.84□□□□□ -0.51
URA1YKL216W YTA7P40340 1379 aa11.84□□□□□ -0.51
URA1YKL216W IQG1Q12280 1495 aa11.83□□□□□ -0.52
URA1YKL216W BUD3P25558 1636 aa11.8□□□□□ -0.52
URA1YKL216W MLP2P40457 1679 aa11.79□□□□□ -0.52
URA1YKL216W GDB1Q06625 1536 aa11.79□□□□□ -0.52
URA1YKL216W NUP157P40064 1391 aaKnown RBP11.73□□□□□ -0.53
URA1YKL216W PDR15Q04182 1529 aaKnown RBP11.7□□□□□ -0.54
URA1YKL216W CHC1P22137 1653 aaKnown RBP11.68□□□□□ -0.54
URA1YKL216W DNF3Q12674 1656 aa11.67□□□□□ -0.54
URA1YKL216W ARO1P08566 1588 aaKnown RBP11.66□□□□□ -0.54
URA1YKL216W SEC7P11075 2009 aaKnown RBP11.57□□□□□ -0.56
URA1YKL216W YAP3P38749 330 aa11.55□□□□□ -0.56
URA1YKL216W MAK10Q02197 733 aa11.47□□□□□ -0.57
URA1YKL216W TY3B-GQ99315 1547 aa11.46□□□□□ -0.57
URA1YKL216W BNR1P40450 1375 aa11.43□□□□□ -0.58
URA1YKL216W TAF7Q05021 590 aa11.43□□□□□ -0.58
URA1YKL216W USO1P25386 1790 aa11.41□□□□□ -0.58
URA1YKL216W CAT8P39113 1433 aa11.4□□□□□ -0.58
URA1YKL216W URN1Q06525 465 aaKnown RBP11.39□□□□□ -0.59
URA1YKL216W SAS10Q12136 610 aaPredicted RBP11.38□□□□□ -0.59
URA1YKL216W IFH1P39520 1085 aa11.33□□□□□ -0.6
URA1YKL216W YSP2Q06681 1438 aa11.33□□□□□ -0.6
URA1YKL216W YBT1P32386 1661 aa11.32□□□□□ -0.6
URA1YKL216W CKB1P43639 278 aa11.29□□□□□ -0.6
URA1YKL216W YMR196WQ04336 1088 aa11.27□□□□□ -0.61
URA1YKL216W GEA1P47102 1408 aaPredicted RBP11.26□□□□□ -0.61
URA1YKL216W TY1B-NL2Q99337 1749 aaKnown RBP11.25□□□□□ -0.61
URA1YKL216W HAP1P0CE41 1502 aa11.22□□□□□ -0.61
URA1YKL216W THI12P42883 340 aa11.2□□□□□ -0.62
URA1YKL216W THI5P43534 340 aa11.2□□□□□ -0.62
URA1YKL216W THI11P47183 340 aa11.2□□□□□ -0.62
URA1YKL216W THI13Q07748 340 aa11.2□□□□□ -0.62
URA1YKL216W IML1P47170 1584 aa11.16□□□□□ -0.62
URA1YKL216W NUP188P52593 1655 aaKnown RBP11.15□□□□□ -0.62
URA1YKL216W IPL1P38991 367 aa11.15□□□□□ -0.62
URA1YKL216W YAH1Q12184 172 aaKnown RBP11.07□□□□□ -0.64
URA1YKL216W GLN1P32288 370 aaKnown RBP11.06□□□□□ -0.64
URA1YKL216W VMR1P38735 1592 aa11.06□□□□□ -0.64
URA1YKL216W SRB8P25648 1427 aa11.05□□□□□ -0.64
URA1YKL216W TYS1P36421 394 aaKnown RBP11.01□□□□□ -0.65
URA1YKL216W BUD21Q08492 214 aaPredicted RBP10.98□□□□□ -0.65
URA1YKL216W YIL055CP40523 627 aaKnown RBP10.95□□□□□ -0.66
URA1YKL216W APP1P53933 587 aa10.9□□□□□ -0.66
URA1YKL216W PRI1P10363 409 aa10.88□□□□□ -0.67
URA1YKL216W PTP3P40048 928 aa10.87□□□□□ -0.67
URA1YKL216W PDR5P33302 1511 aaKnown RBP10.86□□□□□ -0.67
URA1YKL216W BFR2Q06631 534 aaKnown RBP10.82□□□□□ -0.68
URA1YKL216W YMR074CQ04773 145 aa10.8□□□□□ -0.68
URA1YKL216W BCK1Q01389 1478 aa10.8□□□□□ -0.68
URA1YKL216W DIP2Q12220 943 aaPredicted RBP10.77□□□□□ -0.69
URA1YKL216W CFT1Q06632 1357 aaKnown RBP10.77□□□□□ -0.69
URA1YKL216W PDR11P40550 1411 aa10.76□□□□□ -0.69
URA1YKL216W MRX12P47084 519 aa10.75□□□□□ -0.69
URA1YKL216W KRE5P22023 1365 aa10.74□□□□□ -0.69
URA1YKL216W RIA1P53893 1110 aa10.73□□□□□ -0.69
URA1YKL216W REB1P21538 810 aa10.72□□□□□ -0.69
URA1YKL216W YNR029CP53729 429 aaKnown RBP10.72□□□□□ -0.69
URA1YKL216W ENT1Q12518 454 aa10.69□□□□□ -0.7
URA1YKL216W FAP1P53971 965 aa10.67□□□□□ -0.7
URA1YKL216W ENV9Q08651 330 aa10.66□□□□□ -0.7
URA1YKL216W GCN2P15442 1659 aa10.66□□□□□ -0.7
URA1YKL216W IMH1Q06704 911 aaKnown RBP10.63□□□□□ -0.71
URA1YKL216W BUD31P25337 157 aaPredicted RBP10.62□□□□□ -0.71
URA1YKL216W YRF1-2P40105 1681 aa10.62□□□□□ -0.71
URA1YKL216W NUP192P47054 1683 aa10.59□□□□□ -0.71
URA1YKL216W RRP5Q05022 1729 aaKnown RBP10.55□□□□□ -0.72
URA1YKL216W AVT3P36062 692 aa10.54□□□□□ -0.72
URA1YKL216W TY3B-IQ7LHG5 1498 aaKnown RBP10.52□□□□□ -0.73
URA1YKL216W CAB1Q04430 367 aa10.51□□□□□ -0.73
URA1YKL216W UBP1P25037 809 aa10.5□□□□□ -0.73
URA1YKL216W IKI3Q06706 1349 aaKnown RBP10.49□□□□□ -0.73
URA1YKL216W ALD4P46367 519 aaKnown RBP10.48□□□□□ -0.73
URA1YKL216W RAV1P47104 1357 aa10.45□□□□□ -0.74
URA1YKL216W RAD9P14737 1309 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms