RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeastyeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKT6YKL196C YNL035CP53962 389 aaKnown RBP7.1□□□□□ -1.27
YKT6YKL196C YEL023CP39992 682 aa7.09□□□□□ -1.27
YKT6YKL196C SOL3P38858 249 aa7.08□□□□□ -1.28
YKT6YKL196C DAN4P47179 1161 aa7.08□□□□□ -1.28
YKT6YKL196C DMA1P38823 416 aa7.06□□□□□ -1.28
YKT6YKL196C NST1P53935 1240 aa7.06□□□□□ -1.28
YKT6YKL196C NOP53Q12080 455 aaKnown RBP7.06□□□□□ -1.28
YKT6YKL196C NCR1Q12200 1170 aa7.06□□□□□ -1.28
YKT6YKL196C SEC61P32915 480 aa7.05□□□□□ -1.28
YKT6YKL196C JIP4Q03361 876 aa7.05□□□□□ -1.28
YKT6YKL196C PTC4P38089 393 aa7.04□□□□□ -1.28
YKT6YKL196C YJL171CP46992 396 aa7.04□□□□□ -1.28
YKT6YKL196C ILV3P39522 585 aaKnown RBP7□□□□□ -1.29
YKT6YKL196C YGR273CP53329 174 aa6.99□□□□□ -1.29
YKT6YKL196C BMT6Q12291 365 aa6.99□□□□□ -1.29
YKT6YKL196C SAP30P38429 201 aa6.96□□□□□ -1.3
YKT6YKL196C TFG1P41895 735 aaPredicted RBP6.96□□□□□ -1.3
YKT6YKL196C MPH3P0CE00 602 aa6.95□□□□□ -1.3
YKT6YKL196C PML39Q03760 334 aa6.95□□□□□ -1.3
YKT6YKL196C YDL129WQ07555 291 aa6.95□□□□□ -1.3
YKT6YKL196C AI4P03878 556 aa6.93□□□□□ -1.3
YKT6YKL196C MID1P41821 548 aa6.93□□□□□ -1.3
YKT6YKL196C YDR344CQ05510 147 aa6.92□□□□□ -1.3
YKT6YKL196C YPR148CQ06523 435 aa6.92□□□□□ -1.3
YKT6YKL196C VHR2P40041 505 aa6.9□□□□□ -1.3
YKT6YKL196C VPS70P47161 811 aa6.9□□□□□ -1.3
YKT6YKL196C KEX1P09620 729 aa6.89□□□□□ -1.31
YKT6YKL196C UBP14P38237 781 aaKnown RBP6.89□□□□□ -1.31
YKT6YKL196C IFH1P39520 1085 aa6.88□□□□□ -1.31
YKT6YKL196C YLR326WQ06170 240 aaKnown RBP6.88□□□□□ -1.31
YKT6YKL196C SLI15P38283 698 aa6.85□□□□□ -1.31
YKT6YKL196C PCS60P38137 543 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
YKT6YKL196C YDR090CQ03193 310 aa6.82□□□□□ -1.32
YKT6YKL196C REF2P42073 533 aaPredicted RBP6.81□□□□□ -1.32
YKT6YKL196C PEX29Q03370 554 aa6.81□□□□□ -1.32
YKT6YKL196C MPC54Q08550 464 aa6.81□□□□□ -1.32
YKT6YKL196C PRE3P38624 215 aa6.8□□□□□ -1.32
YKT6YKL196C SAS10Q12136 610 aaPredicted RBP6.8□□□□□ -1.32
YKT6YKL196C RAD54P32863 898 aa6.79□□□□□ -1.32
YKT6YKL196C ELP4Q02884 456 aaKnown RBP6.78□□□□□ -1.32
YKT6YKL196C CDC73Q06697 393 aa6.78□□□□□ -1.32
YKT6YKL196C CHL1P22516 861 aaPredicted RBP6.77□□□□□ -1.33
YKT6YKL196C ARH1P48360 493 aa6.77□□□□□ -1.33
YKT6YKL196C DPL1Q05567 589 aa6.74□□□□□ -1.33
YKT6YKL196C NMA111P53920 997 aa6.73□□□□□ -1.33
YKT6YKL196C HAP5Q02516 242 aa6.73□□□□□ -1.33
YKT6YKL196C KIC1P38692 1080 aa6.72□□□□□ -1.33
YKT6YKL196C RQC2Q12532 1038 aaKnown RBP6.72□□□□□ -1.33
YKT6YKL196C CKB1P43639 278 aa6.71□□□□□ -1.34
YKT6YKL196C COX6P00427 148 aa6.7□□□□□ -1.34
YKT6YKL196C PBS2P08018 668 aa6.7□□□□□ -1.34
YKT6YKL196C SPT23P35210 1082 aa6.68□□□□□ -1.34
YKT6YKL196C MAK21Q12176 1025 aaKnown RBP6.67□□□□□ -1.34
YKT6YKL196C BCK2P33306 851 aa6.66□□□□□ -1.34
YKT6YKL196C BNI4P53858 892 aa6.66□□□□□ -1.34
YKT6YKL196C ISU2Q12056 156 aa6.66□□□□□ -1.34
YKT6YKL196C VRP1P37370 817 aa6.65□□□□□ -1.34
YKT6YKL196C ORC6P38826 435 aa6.65□□□□□ -1.34
YKT6YKL196C PDR1P12383 1068 aa6.63□□□□□ -1.35
YKT6YKL196C GAP1P19145 602 aaPredicted RBP6.63□□□□□ -1.35
YKT6YKL196C PTC2P39966 464 aaKnown RBP6.62□□□□□ -1.35
YKT6YKL196C YPR015CQ12531 247 aa6.62□□□□□ -1.35
YKT6YKL196C RAM1P22007 431 aa6.61□□□□□ -1.35
YKT6YKL196C SPB4P25808 606 aaPredicted RBP6.61□□□□□ -1.35
YKT6YKL196C DSF2P38213 736 aa6.61□□□□□ -1.35
YKT6YKL196C RPP1BP10622 106 aaKnown RBP6.6□□□□□ -1.35
YKT6YKL196C IES2P40154 320 aa6.6□□□□□ -1.35
YKT6YKL196C MAM3Q12296 706 aa6.6□□□□□ -1.35
YKT6YKL196C YML082WQ04533 649 aaKnown RBP6.59□□□□□ -1.35
YKT6YKL196C YRR1Q12172 810 aa6.59□□□□□ -1.35
YKT6YKL196C PEX21P50091 288 aa6.58□□□□□ -1.36
YKT6YKL196C CSC1Q06538 782 aa6.58□□□□□ -1.36
YKT6YKL196C MVP1P40959 511 aaKnown RBP6.57□□□□□ -1.36
YKT6YKL196C TUM1Q08686 304 aaKnown RBP6.56□□□□□ -1.36
YKT6YKL196C TFB4Q12004 338 aa6.56□□□□□ -1.36
YKT6YKL196C RGR1P19263 1082 aa6.55□□□□□ -1.36
YKT6YKL196C NUP42P49686 430 aaKnown RBP6.55□□□□□ -1.36
YKT6YKL196C XDJ1P39102 459 aa6.54□□□□□ -1.36
YKT6YKL196C DIT2P21595 489 aa6.53□□□□□ -1.36
YKT6YKL196C YPR109WQ06104 294 aa6.53□□□□□ -1.36
YKT6YKL196C STR2P47164 639 aa6.51□□□□□ -1.37
YKT6YKL196C NUD1P32336 851 aa6.5□□□□□ -1.37
YKT6YKL196C PSE1P32337 1089 aaKnown RBP6.5□□□□□ -1.37
YKT6YKL196C ISM1P48526 1002 aa6.5□□□□□ -1.37
YKT6YKL196C BUD20Q08004 166 aaPredicted RBP6.49□□□□□ -1.37
YKT6YKL196C GYP1Q08484 637 aa6.45□□□□□ -1.38
YKT6YKL196C TY1A-DR4O74302 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-HP0C2I4 478 aaKnown RBP6.43□□□□□ -1.38
YKT6YKL196C TY1A-AP0CX57 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-PR1P0CX58 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-ORP0CX59 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-PR2P0CX60 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-DR5P0CX65 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-ER2P0CX66 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-GR3P0CX67 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-LR1P0CX68 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-MR2P0CX69 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-JR2P47099 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-DR1Q03856 440 aa6.43□□□□□ -1.38
YKT6YKL196C TY1A-ML1Q04706 440 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms