RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W VPS15P22219 1454 aa7.19□□□□□ -1.26
ABF1YKL112W YOR093CQ12275 1648 aa7.19□□□□□ -1.26
ABF1YKL112W TOP2P06786 1428 aaKnown RBP7.18□□□□□ -1.26
ABF1YKL112W MMS22Q06164 1454 aa7.18□□□□□ -1.26
ABF1YKL112W NTE1Q04958 1679 aa7.17□□□□□ -1.26
ABF1YKL112W TRM732Q03496 1420 aa7.16□□□□□ -1.26
ABF1YKL112W RPO21P04050 1733 aaKnown RBP7.14□□□□□ -1.27
ABF1YKL112W NUP159P40477 1460 aa7.14□□□□□ -1.27
ABF1YKL112W FAP1P53971 965 aa7.13□□□□□ -1.27
ABF1YKL112W URN1Q06525 465 aaKnown RBP7.13□□□□□ -1.27
ABF1YKL112W SPO14P36126 1683 aa7.08□□□□□ -1.28
ABF1YKL112W NUP170P38181 1502 aa7.07□□□□□ -1.28
ABF1YKL112W DOP1Q03921 1698 aa7.02□□□□□ -1.29
ABF1YKL112W SPP41P38904 1435 aa7.01□□□□□ -1.29
ABF1YKL112W SMC4Q12267 1418 aa7.01□□□□□ -1.29
ABF1YKL112W VTH1P40438 1549 aa7□□□□□ -1.29
ABF1YKL112W VTH2P40890 1549 aa7□□□□□ -1.29
ABF1YKL112W SNT2P53127 1403 aa6.99□□□□□ -1.29
ABF1YKL112W POL1P13382 1468 aa6.98□□□□□ -1.29
ABF1YKL112W TSC11P40061 1430 aa6.98□□□□□ -1.29
ABF1YKL112W ULS1Q08562 1619 aa6.96□□□□□ -1.29
ABF1YKL112W YOR1P53049 1477 aa6.96□□□□□ -1.29
ABF1YKL112W TRM3Q07527 1436 aa6.93□□□□□ -1.3
ABF1YKL112W MYO4P32492 1471 aa6.92□□□□□ -1.3
ABF1YKL112W PDR12Q02785 1511 aa6.9□□□□□ -1.31
ABF1YKL112W DNF3Q12674 1656 aa6.89□□□□□ -1.31
ABF1YKL112W SNQ2P32568 1501 aaKnown RBP6.89□□□□□ -1.31
ABF1YKL112W CHC1P22137 1653 aaKnown RBP6.85□□□□□ -1.31
ABF1YKL112W PDR15Q04182 1529 aaKnown RBP6.85□□□□□ -1.31
ABF1YKL112W GDB1Q06625 1536 aa6.85□□□□□ -1.31
ABF1YKL112W BUD3P25558 1636 aa6.84□□□□□ -1.31
ABF1YKL112W STU1P38198 1513 aa6.84□□□□□ -1.31
ABF1YKL112W PDR10P51533 1564 aa6.83□□□□□ -1.32
ABF1YKL112W MET10P39692 1035 aa6.83□□□□□ -1.32
ABF1YKL112W IQG1Q12280 1495 aa6.82□□□□□ -1.32
ABF1YKL112W ARO1P08566 1588 aaKnown RBP6.82□□□□□ -1.32
ABF1YKL112W MLP2P40457 1679 aa6.81□□□□□ -1.32
ABF1YKL112W USO1P25386 1790 aa6.76□□□□□ -1.33
ABF1YKL112W LEO1P38439 464 aa6.76□□□□□ -1.33
ABF1YKL112W SEC7P11075 2009 aaKnown RBP6.74□□□□□ -1.33
ABF1YKL112W STH1P32597 1359 aa6.71□□□□□ -1.33
ABF1YKL112W PRI1P10363 409 aa6.71□□□□□ -1.33
ABF1YKL112W PRY3P47033 881 aa6.71□□□□□ -1.33
ABF1YKL112W TY3B-GQ99315 1547 aa6.69□□□□□ -1.34
ABF1YKL112W YTA7P40340 1379 aa6.68□□□□□ -1.34
ABF1YKL112W NUP157P40064 1391 aaKnown RBP6.67□□□□□ -1.34
ABF1YKL112W AAD16Q02895 342 aa6.66□□□□□ -1.34
ABF1YKL112W DMA1P38823 416 aa6.65□□□□□ -1.34
ABF1YKL112W IOC4Q04213 475 aa6.65□□□□□ -1.34
ABF1YKL112W NAP1P25293 417 aaKnown RBP6.65□□□□□ -1.35
ABF1YKL112W SIS2P36024 562 aa6.65□□□□□ -1.35
ABF1YKL112W TY1B-NL2Q99337 1749 aaKnown RBP6.63□□□□□ -1.35
ABF1YKL112W YAP3P38749 330 aa6.62□□□□□ -1.35
ABF1YKL112W RTT106P40161 455 aa6.61□□□□□ -1.35
ABF1YKL112W MAK10Q02197 733 aa6.6□□□□□ -1.35
ABF1YKL112W BNR1P40450 1375 aa6.6□□□□□ -1.35
ABF1YKL112W HAP1P0CE41 1502 aa6.58□□□□□ -1.36
ABF1YKL112W YRB30P53107 440 aaPredicted RBP6.58□□□□□ -1.36
ABF1YKL112W ISW2Q08773 1120 aa6.55□□□□□ -1.36
ABF1YKL112W YFR016CP43597 1233 aaKnown RBP6.55□□□□□ -1.36
ABF1YKL112W NUP188P52593 1655 aaKnown RBP6.53□□□□□ -1.36
ABF1YKL112W GLN1P32288 370 aaKnown RBP6.51□□□□□ -1.37
ABF1YKL112W YSP2Q06681 1438 aa6.51□□□□□ -1.37
ABF1YKL112W YMR196WQ04336 1088 aa6.51□□□□□ -1.37
ABF1YKL112W RPG1P38249 964 aaKnown RBP6.5□□□□□ -1.37
ABF1YKL112W YBT1P32386 1661 aa6.5□□□□□ -1.37
ABF1YKL112W EBP2P36049 427 aaKnown RBP6.49□□□□□ -1.37
ABF1YKL112W AIM44Q99299 758 aa6.48□□□□□ -1.37
ABF1YKL112W IML1P47170 1584 aa6.47□□□□□ -1.37
ABF1YKL112W YAH1Q12184 172 aaKnown RBP6.47□□□□□ -1.37
ABF1YKL112W AVT3P36062 692 aa6.47□□□□□ -1.37
ABF1YKL112W DIP2Q12220 943 aaPredicted RBP6.46□□□□□ -1.38
ABF1YKL112W CAT8P39113 1433 aa6.45□□□□□ -1.38
ABF1YKL112W THI12P42883 340 aa6.44□□□□□ -1.38
ABF1YKL112W THI5P43534 340 aa6.44□□□□□ -1.38
ABF1YKL112W THI11P47183 340 aa6.44□□□□□ -1.38
ABF1YKL112W THI13Q07748 340 aa6.44□□□□□ -1.38
ABF1YKL112W IFH1P39520 1085 aa6.42□□□□□ -1.38
ABF1YKL112W KRI1P42846 591 aaKnown RBP6.42□□□□□ -1.38
ABF1YKL112W CAB3P36076 571 aa6.41□□□□□ -1.38
ABF1YKL112W YCK3P39962 524 aa6.41□□□□□ -1.38
ABF1YKL112W VMR1P38735 1592 aa6.41□□□□□ -1.38
ABF1YKL112W YIL055CP40523 627 aaKnown RBP6.38□□□□□ -1.39
ABF1YKL112W RPS0BP46654 252 aaKnown RBP6.37□□□□□ -1.39
ABF1YKL112W TSR3Q12094 313 aaKnown RBP6.33□□□□□ -1.4
ABF1YKL112W SNU71P53207 620 aaKnown RBP6.31□□□□□ -1.4
ABF1YKL112W HAA1Q12753 694 aaKnown RBP6.31□□□□□ -1.4
ABF1YKL112W IPL1P38991 367 aa6.31□□□□□ -1.4
ABF1YKL112W ORC1P54784 914 aaPredicted RBP6.31□□□□□ -1.4
ABF1YKL112W YMR074CQ04773 145 aa6.31□□□□□ -1.4
ABF1YKL112W BCK1Q01389 1478 aa6.3□□□□□ -1.4
ABF1YKL112W PTP3P40048 928 aa6.28□□□□□ -1.4
ABF1YKL112W YRF1-2P40105 1681 aa6.28□□□□□ -1.4
ABF1YKL112W TOP1P04786 769 aa6.27□□□□□ -1.41
ABF1YKL112W GEA1P47102 1408 aaPredicted RBP6.27□□□□□ -1.41
ABF1YKL112W APP1P53933 587 aa6.27□□□□□ -1.41
ABF1YKL112W CKB1P43639 278 aa6.23□□□□□ -1.41
ABF1YKL112W LEU3P08638 886 aa6.22□□□□□ -1.41
ABF1YKL112W MNN4P36044 1178 aa6.22□□□□□ -1.41
ABF1YKL112W PDR11P40550 1411 aa6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms