RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W VPS29P38759 282 aa9□□□□□ -0.97
SWD2YKL018W HTA1P04911 132 aaKnown RBP8.97□□□□□ -0.97
SWD2YKL018W HTA2P04912 132 aa8.97□□□□□ -0.97
SWD2YKL018W RTG3P38165 486 aa8.97□□□□□ -0.97
SWD2YKL018W STS1P38637 319 aa8.97□□□□□ -0.97
SWD2YKL018W PTC4P38089 393 aa8.95□□□□□ -0.98
SWD2YKL018W GYP5Q12344 894 aa8.93□□□□□ -0.98
SWD2YKL018W YEL023CP39992 682 aa8.92□□□□□ -0.98
SWD2YKL018W DCW1P36091 449 aa8.86□□□□□ -0.99
SWD2YKL018W ELP4Q02884 456 aaKnown RBP8.86□□□□□ -0.99
SWD2YKL018W SRC1Q03707 834 aa8.86□□□□□ -0.99
SWD2YKL018W YDR344CQ05510 147 aa8.84□□□□□ -0.99
SWD2YKL018W RCR1P38212 213 aa8.82□□□□□ -1
SWD2YKL018W PML39Q03760 334 aa8.76□□□□□ -1.01
SWD2YKL018W ARH1P48360 493 aa8.73□□□□□ -1.01
SWD2YKL018W RAM2P29703 316 aa8.66□□□□□ -1.02
SWD2YKL018W SPT23P35210 1082 aa8.64□□□□□ -1.03
SWD2YKL018W MAK11P20484 414 aaKnown RBP8.63□□□□□ -1.03
SWD2YKL018W MIF2P35201 549 aa8.61□□□□□ -1.03
SWD2YKL018W GRE2Q12068 342 aaKnown RBP8.57□□□□□ -1.04
SWD2YKL018W MID1P41821 548 aa8.53□□□□□ -1.04
SWD2YKL018W COQ8P27697 501 aa8.52□□□□□ -1.05
SWD2YKL018W PEX29Q03370 554 aa8.52□□□□□ -1.05
SWD2YKL018W BNI4P53858 892 aa8.49□□□□□ -1.05
SWD2YKL018W HAP5Q02516 242 aa8.49□□□□□ -1.05
SWD2YKL018W YML082WQ04533 649 aaKnown RBP8.49□□□□□ -1.05
SWD2YKL018W ATH1P48016 1211 aa8.47□□□□□ -1.05
SWD2YKL018W PTC3P34221 468 aaKnown RBP8.46□□□□□ -1.06
SWD2YKL018W PTC2P39966 464 aaKnown RBP8.46□□□□□ -1.06
SWD2YKL018W EDS1P38073 919 aa8.45□□□□□ -1.06
SWD2YKL018W GUT1P32190 709 aa8.43□□□□□ -1.06
SWD2YKL018W RAS1P01119 309 aa8.41□□□□□ -1.06
SWD2YKL018W NST1P53935 1240 aa8.41□□□□□ -1.06
SWD2YKL018W SET1P38827 1080 aaKnown RBP8.4□□□□□ -1.06
SWD2YKL018W TRK1P12685 1235 aa8.38□□□□□ -1.07
SWD2YKL018W NOP53Q12080 455 aaKnown RBP8.38□□□□□ -1.07
SWD2YKL018W YPL062WQ02781 134 aa8.37□□□□□ -1.07
SWD2YKL018W AI4P03878 556 aa8.35□□□□□ -1.07
SWD2YKL018W MPH3P0CE00 602 aa8.33□□□□□ -1.08
SWD2YKL018W DMA1P38823 416 aa8.3□□□□□ -1.08
SWD2YKL018W SOL3P38858 249 aa8.27□□□□□ -1.09
SWD2YKL018W MPC54Q08550 464 aa8.27□□□□□ -1.09
SWD2YKL018W AMS1P22855 1083 aa8.26□□□□□ -1.09
SWD2YKL018W IFH1P39520 1085 aa8.25□□□□□ -1.09
SWD2YKL018W RQC2Q12532 1038 aaKnown RBP8.23□□□□□ -1.09
SWD2YKL018W ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
SWD2YKL018W YGR273CP53329 174 aa8.21□□□□□ -1.1
SWD2YKL018W NMA111P53920 997 aa8.2□□□□□ -1.1
SWD2YKL018W YPR015CQ12531 247 aa8.17□□□□□ -1.1
SWD2YKL018W VPS70P47161 811 aa8.14□□□□□ -1.11
SWD2YKL018W GYP1Q08484 637 aa8.13□□□□□ -1.11
SWD2YKL018W VHR2P40041 505 aa8.12□□□□□ -1.11
SWD2YKL018W DPL1Q05567 589 aa8.11□□□□□ -1.11
SWD2YKL018W RAM1P22007 431 aa8.1□□□□□ -1.11
SWD2YKL018W YPR148CQ06523 435 aa8.1□□□□□ -1.11
SWD2YKL018W KEX1P09620 729 aa8.09□□□□□ -1.11
SWD2YKL018W KIC1P38692 1080 aa8.06□□□□□ -1.12
SWD2YKL018W REF2P42073 533 aaPredicted RBP8.06□□□□□ -1.12
SWD2YKL018W RAD54P32863 898 aa8.05□□□□□ -1.12
SWD2YKL018W SAS4Q04003 481 aa8.05□□□□□ -1.12
SWD2YKL018W YLR326WQ06170 240 aaKnown RBP8.05□□□□□ -1.12
SWD2YKL018W YEL077CQ3E7X8 1277 aa8.05□□□□□ -1.12
SWD2YKL018W SDH2P21801 266 aa8.04□□□□□ -1.12
SWD2YKL018W UBP14P38237 781 aaKnown RBP8.04□□□□□ -1.12
SWD2YKL018W SLI15P38283 698 aa8.04□□□□□ -1.12
SWD2YKL018W CKB1P43639 278 aa8.01□□□□□ -1.13
SWD2YKL018W RPP1BP10622 106 aaKnown RBP8□□□□□ -1.13
SWD2YKL018W GBP2P25555 427 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
SWD2YKL018W ISU2Q12056 156 aa8□□□□□ -1.13
SWD2YKL018W PCS60P38137 543 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SWD2YKL018W BRE2P43132 505 aa7.99□□□□□ -1.13
SWD2YKL018W GAR1P28007 205 aaKnown RBP7.98□□□□□ -1.13
SWD2YKL018W SAS10Q12136 610 aaPredicted RBP7.95□□□□□ -1.14
SWD2YKL018W MAK21Q12176 1025 aaKnown RBP7.94□□□□□ -1.14
SWD2YKL018W GCR2Q01722 534 aa7.93□□□□□ -1.14
SWD2YKL018W YDR090CQ03193 310 aa7.93□□□□□ -1.14
SWD2YKL018W PBS2P08018 668 aa7.92□□□□□ -1.14
SWD2YKL018W CDC73Q06697 393 aa7.92□□□□□ -1.14
SWD2YKL018W COX6P00427 148 aa7.91□□□□□ -1.14
SWD2YKL018W MRF1P30775 413 aaPredicted RBP7.91□□□□□ -1.14
SWD2YKL018W SPB4P25808 606 aaPredicted RBP7.9□□□□□ -1.14
SWD2YKL018W PEX21P50091 288 aa7.89□□□□□ -1.15
SWD2YKL018W PDR1P12383 1068 aa7.85□□□□□ -1.15
SWD2YKL018W MAM3Q12296 706 aa7.84□□□□□ -1.15
SWD2YKL018W CSC1Q06538 782 aa7.81□□□□□ -1.16
SWD2YKL018W AIR1P40507 360 aaKnown RBP7.79□□□□□ -1.16
SWD2YKL018W DSF2P38213 736 aa7.78□□□□□ -1.16
SWD2YKL018W TFB4Q12004 338 aa7.78□□□□□ -1.16
SWD2YKL018W ORC6P38826 435 aa7.77□□□□□ -1.17
SWD2YKL018W TUM1Q08686 304 aaKnown RBP7.77□□□□□ -1.17
SWD2YKL018W YRR1Q12172 810 aa7.77□□□□□ -1.17
SWD2YKL018W IES2P40154 320 aa7.76□□□□□ -1.17
SWD2YKL018W ERG12P07277 443 aa7.73□□□□□ -1.17
SWD2YKL018W MVP1P40959 511 aaKnown RBP7.73□□□□□ -1.17
SWD2YKL018W ENV9Q08651 330 aa7.73□□□□□ -1.17
SWD2YKL018W GAP1P19145 602 aaPredicted RBP7.72□□□□□ -1.17
SWD2YKL018W MET22P32179 357 aa7.72□□□□□ -1.17
SWD2YKL018W NPL4P33755 580 aa7.71□□□□□ -1.18
SWD2YKL018W PRT1P06103 763 aaKnown RBP7.7□□□□□ -1.18
SWD2YKL018W RGR1P19263 1082 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms