RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeastyeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOM6YJR139C YRF1-5P0CX21 1796 aa20.46■□□□□ 0.87
HOM6YJR139C YRF1-8P0CX22 1796 aa20.46■□□□□ 0.87
HOM6YJR139C RPO21P04050 1733 aaKnown RBP20.46■□□□□ 0.87
HOM6YJR139C SNQ2P32568 1501 aaKnown RBP20.37■□□□□ 0.85
HOM6YJR139C GEA2P39993 1459 aaKnown RBP20.34■□□□□ 0.85
HOM6YJR139C VPS15P22219 1454 aa20.33■□□□□ 0.85
HOM6YJR139C STH1P32597 1359 aa20.27■□□□□ 0.84
HOM6YJR139C SNT2P53127 1403 aa20.25■□□□□ 0.83
HOM6YJR139C BNI1P41832 1953 aa20.24■□□□□ 0.83
HOM6YJR139C MLP2P40457 1679 aa20.22■□□□□ 0.83
HOM6YJR139C SAS10Q12136 610 aaPredicted RBP20.16■□□□□ 0.82
HOM6YJR139C ULS1Q08562 1619 aa20.16■□□□□ 0.82
HOM6YJR139C ITT1Q04638 464 aa20.12■□□□□ 0.81
HOM6YJR139C PDR15Q04182 1529 aaKnown RBP20.11■□□□□ 0.81
HOM6YJR139C RTT106P40161 455 aa20.07■□□□□ 0.8
HOM6YJR139C DRS2P39524 1355 aa20.07■□□□□ 0.8
HOM6YJR139C SPO14P36126 1683 aa20.07■□□□□ 0.8
HOM6YJR139C MET10P39692 1035 aa20.03■□□□□ 0.8
HOM6YJR139C PDR12Q02785 1511 aa19.99■□□□□ 0.79
HOM6YJR139C NUP170P38181 1502 aa19.97■□□□□ 0.79
HOM6YJR139C MMS1Q06211 1407 aa19.94■□□□□ 0.78
HOM6YJR139C IRC20Q06554 1556 aa19.94■□□□□ 0.78
HOM6YJR139C TAF7Q05021 590 aa19.93■□□□□ 0.78
HOM6YJR139C GDB1Q06625 1536 aa19.91■□□□□ 0.78
HOM6YJR139C IFH1P39520 1085 aa19.85■□□□□ 0.77
HOM6YJR139C NUP157P40064 1391 aaKnown RBP19.83■□□□□ 0.77
HOM6YJR139C IQG1Q12280 1495 aa19.78■□□□□ 0.76
HOM6YJR139C GEA1P47102 1408 aaPredicted RBP19.76■□□□□ 0.75
HOM6YJR139C PDR10P51533 1564 aa19.74■□□□□ 0.75
HOM6YJR139C DOP1Q03921 1698 aa19.72■□□□□ 0.75
HOM6YJR139C DNF2Q12675 1612 aa19.7■□□□□ 0.74
HOM6YJR139C TY3B-GQ99315 1547 aa19.69■□□□□ 0.74
HOM6YJR139C YBT1P32386 1661 aa19.68■□□□□ 0.74
HOM6YJR139C ABP1P15891 592 aaKnown RBP19.67■□□□□ 0.74
HOM6YJR139C BUD3P25558 1636 aa19.66■□□□□ 0.74
HOM6YJR139C TRM3Q07527 1436 aa19.64■□□□□ 0.73
HOM6YJR139C CAT8P39113 1433 aa19.63■□□□□ 0.73
HOM6YJR139C MIF2P35201 549 aa19.62■□□□□ 0.73
HOM6YJR139C ARO1P08566 1588 aaKnown RBP19.53■□□□□ 0.72
HOM6YJR139C CHC1P22137 1653 aaKnown RBP19.5■□□□□ 0.71
HOM6YJR139C CKB1P43639 278 aa19.43■□□□□ 0.7
HOM6YJR139C SEC7P11075 2009 aaKnown RBP19.39■□□□□ 0.69
HOM6YJR139C YSP2Q06681 1438 aa19.38■□□□□ 0.69
HOM6YJR139C BNR1P40450 1375 aa19.28■□□□□ 0.68
HOM6YJR139C YOR093CQ12275 1648 aa19.27■□□□□ 0.68
HOM6YJR139C SRB8P25648 1427 aa19.23■□□□□ 0.67
HOM6YJR139C DNF3Q12674 1656 aa19.11■□□□□ 0.65
HOM6YJR139C IKI3Q06706 1349 aaKnown RBP19.08■□□□□ 0.65
HOM6YJR139C YFR006WP43590 535 aa19.02■□□□□ 0.64
HOM6YJR139C BUD21Q08492 214 aaPredicted RBP19.02■□□□□ 0.64
HOM6YJR139C YAP3P38749 330 aa19.01■□□□□ 0.63
HOM6YJR139C SSM4P40318 1319 aa18.93■□□□□ 0.62
HOM6YJR139C NUP188P52593 1655 aaKnown RBP18.89■□□□□ 0.61
HOM6YJR139C URN1Q06525 465 aaKnown RBP18.89■□□□□ 0.61
HOM6YJR139C VMR1P38735 1592 aa18.84■□□□□ 0.61
HOM6YJR139C MAK10Q02197 733 aa18.76■□□□□ 0.59
HOM6YJR139C IPL1P38991 367 aa18.75■□□□□ 0.59
HOM6YJR139C IML1P47170 1584 aa18.74■□□□□ 0.59
HOM6YJR139C GCN2P15442 1659 aa18.71■□□□□ 0.59
HOM6YJR139C TYS1P36421 394 aaKnown RBP18.7■□□□□ 0.58
HOM6YJR139C PDR5P33302 1511 aaKnown RBP18.67■□□□□ 0.58
HOM6YJR139C USO1P25386 1790 aa18.67■□□□□ 0.58
HOM6YJR139C HAP1P0CE41 1502 aa18.64■□□□□ 0.58
HOM6YJR139C PDR11P40550 1411 aa18.55■□□□□ 0.56
HOM6YJR139C TY1B-NL2Q99337 1749 aaKnown RBP18.46■□□□□ 0.55
HOM6YJR139C PAF1P38351 445 aa18.35■□□□□ 0.53
HOM6YJR139C RAV1P47104 1357 aa18.33■□□□□ 0.53
HOM6YJR139C YMR196WQ04336 1088 aa18.32■□□□□ 0.52
HOM6YJR139C THI12P42883 340 aa18.3■□□□□ 0.52
HOM6YJR139C THI5P43534 340 aa18.3■□□□□ 0.52
HOM6YJR139C THI11P47183 340 aa18.3■□□□□ 0.52
HOM6YJR139C THI13Q07748 340 aa18.3■□□□□ 0.52
HOM6YJR139C KRE5P22023 1365 aa18.26■□□□□ 0.51
HOM6YJR139C BFR2Q06631 534 aaKnown RBP18.25■□□□□ 0.51
HOM6YJR139C NOP7P53261 605 aaKnown RBP18.22■□□□□ 0.51
HOM6YJR139C NUP192P47054 1683 aa18.22■□□□□ 0.51
HOM6YJR139C BCK1Q01389 1478 aa18.21■□□□□ 0.51
HOM6YJR139C MRX12P47084 519 aa18.2■□□□□ 0.5
HOM6YJR139C RTC1Q08281 1341 aa18.2■□□□□ 0.5
HOM6YJR139C RIA1P53893 1110 aa18.19■□□□□ 0.5
HOM6YJR139C CFT1Q06632 1357 aaKnown RBP18.18■□□□□ 0.5
HOM6YJR139C RAD9P14737 1309 aa18.12■□□□□ 0.49
HOM6YJR139C CAB1Q04430 367 aa18.1■□□□□ 0.49
HOM6YJR139C ALD4P46367 519 aaKnown RBP18.07■□□□□ 0.48
HOM6YJR139C YNR029CP53729 429 aaKnown RBP18.05■□□□□ 0.48
HOM6YJR139C TAF5P38129 798 aa17.95■□□□□ 0.46
HOM6YJR139C TY3B-IQ7LHG5 1498 aaKnown RBP17.91■□□□□ 0.46
HOM6YJR139C ESL2P36168 1195 aa17.91■□□□□ 0.46
HOM6YJR139C TAF8Q03750 510 aa17.87■□□□□ 0.45
HOM6YJR139C NAP1P25293 417 aaKnown RBP17.85■□□□□ 0.45
HOM6YJR139C PTP3P40048 928 aa17.83■□□□□ 0.44
HOM6YJR139C YAH1Q12184 172 aaKnown RBP17.75■□□□□ 0.43
HOM6YJR139C RCM1P53972 490 aa17.74■□□□□ 0.43
HOM6YJR139C APP1P53933 587 aa17.72■□□□□ 0.43
HOM6YJR139C KIP3P53086 805 aaKnown RBP17.71■□□□□ 0.43
HOM6YJR139C CPS1P27614 576 aa17.7■□□□□ 0.42
HOM6YJR139C SPE2P21182 396 aa17.69■□□□□ 0.42
HOM6YJR139C PPH3P32345 308 aa17.66■□□□□ 0.42
HOM6YJR139C ORC1P54784 914 aaPredicted RBP17.66■□□□□ 0.42
HOM6YJR139C REB1P21538 810 aa17.63■□□□□ 0.41
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms