RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	TY2B-B	Q12491	1770 aa		5.93	□□□□□ -1.46
SOD1	YJR104C	DOP1	Q03921	1698 aa		5.92	□□□□□ -1.46
SOD1	YJR104C	FAP1	P53971	965 aa		5.91	□□□□□ -1.46
SOD1	YJR104C	TOP2	P06786	1428 aa	Known RBP	5.9	□□□□□ -1.47
SOD1	YJR104C	SPO14	P36126	1683 aa		5.89	□□□□□ -1.47
SOD1	YJR104C	RPG1	P38249	964 aa	Known RBP	5.87	□□□□□ -1.47
SOD1	YJR104C	RRD1	P40454	393 aa	Known RBP	5.87	□□□□□ -1.47
SOD1	YJR104C	SPP41	P38904	1435 aa		5.86	□□□□□ -1.47
SOD1	YJR104C	DNF3	Q12674	1656 aa		5.85	□□□□□ -1.47
SOD1	YJR104C	TY1B-DR3	Q99231	1755 aa		5.85	□□□□□ -1.47
SOD1	YJR104C	TRM3	Q07527	1436 aa		5.84	□□□□□ -1.47
SOD1	YJR104C	ARO1	P08566	1588 aa	Known RBP	5.84	□□□□□ -1.48
SOD1	YJR104C	SNT2	P53127	1403 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-JR2	P47100	1755 aa	Known RBP	5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-ER2	Q03619	1755 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-MR1	Q04214	1755 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-MR2	Q04670	1755 aa	Known RBP	5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-LR1	Q12088	1755 aa	Known RBP	5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-NL1	Q12112	1755 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-GR1	Q12141	1755 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	TY1B-BL	Q12490	1755 aa		5.82	□□□□□ -1.48
SOD1	YJR104C	RPO21	P04050	1733 aa	Known RBP	5.82	□□□□□ -1.48
SOD1	YJR104C	PRI1	P10363	409 aa		5.79	□□□□□ -1.48
SOD1	YJR104C	ULS1	Q08562	1619 aa		5.78	□□□□□ -1.48
SOD1	YJR104C	PDR10	P51533	1564 aa		5.77	□□□□□ -1.49
SOD1	YJR104C	TSC11	P40061	1430 aa		5.77	□□□□□ -1.49
SOD1	YJR104C	GDB1	Q06625	1536 aa		5.77	□□□□□ -1.49
SOD1	YJR104C	RPL17A	P05740	184 aa	Known RBP	5.76	□□□□□ -1.49
SOD1	YJR104C	RPL17B	P46990	184 aa	Known RBP	5.76	□□□□□ -1.49
SOD1	YJR104C	VTH1	P40438	1549 aa		5.74	□□□□□ -1.49
SOD1	YJR104C	VTH2	P40890	1549 aa		5.74	□□□□□ -1.49
SOD1	YJR104C	MET10	P39692	1035 aa		5.72	□□□□□ -1.49
SOD1	YJR104C	MAK10	Q02197	733 aa		5.72	□□□□□ -1.49
SOD1	YJR104C	REB1	P21538	810 aa		5.71	□□□□□ -1.5
SOD1	YJR104C	YAH1	Q12184	172 aa	Known RBP	5.71	□□□□□ -1.5
SOD1	YJR104C	IQG1	Q12280	1495 aa		5.71	□□□□□ -1.5
SOD1	YJR104C	YIL055C	P40523	627 aa	Known RBP	5.7	□□□□□ -1.5
SOD1	YJR104C	AAD16	Q02895	342 aa		5.7	□□□□□ -1.5
SOD1	YJR104C	PDR12	Q02785	1511 aa		5.68	□□□□□ -1.5
SOD1	YJR104C	SSA1	P10591	642 aa	Known RBP	5.67	□□□□□ -1.5
SOD1	YJR104C	BNR1	P40450	1375 aa		5.67	□□□□□ -1.5
SOD1	YJR104C	SMC4	Q12267	1418 aa		5.66	□□□□□ -1.5
SOD1	YJR104C	SSN2	P38931	1420 aa		5.65	□□□□□ -1.5
SOD1	YJR104C	YAP3	P38749	330 aa		5.65	□□□□□ -1.5
SOD1	YJR104C	MYO4	P32492	1471 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	TY3B-G	Q99315	1547 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	THI12	P42883	340 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	THI5	P43534	340 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	THI11	P47183	340 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	THI13	Q07748	340 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	USO1	P25386	1790 aa		5.64	□□□□□ -1.51
SOD1	YJR104C	YSP2	Q06681	1438 aa		5.63	□□□□□ -1.51
SOD1	YJR104C	YMR074C	Q04773	145 aa		5.62	□□□□□ -1.51
SOD1	YJR104C	CHC1	P22137	1653 aa	Known RBP	5.61	□□□□□ -1.51
SOD1	YJR104C	SNQ2	P32568	1501 aa	Known RBP	5.61	□□□□□ -1.51
SOD1	YJR104C	BUD3	P25558	1636 aa		5.59	□□□□□ -1.51
SOD1	YJR104C	YTA7	P40340	1379 aa		5.59	□□□□□ -1.51
SOD1	YJR104C	YMR196W	Q04336	1088 aa		5.59	□□□□□ -1.51
SOD1	YJR104C	YOR1	P53049	1477 aa		5.58	□□□□□ -1.52
SOD1	YJR104C	APP1	P53933	587 aa		5.58	□□□□□ -1.52
SOD1	YJR104C	STU1	P38198	1513 aa		5.55	□□□□□ -1.52
SOD1	YJR104C	POL1	P13382	1468 aa		5.55	□□□□□ -1.52
SOD1	YJR104C	NUP157	P40064	1391 aa	Known RBP	5.55	□□□□□ -1.52
SOD1	YJR104C	TSR3	Q12094	313 aa	Known RBP	5.54	□□□□□ -1.52
SOD1	YJR104C	MLP2	P40457	1679 aa		5.53	□□□□□ -1.52
SOD1	YJR104C	HAP1	P0CE41	1502 aa		5.51	□□□□□ -1.53
SOD1	YJR104C	BUD31	P25337	157 aa	Predicted RBP	5.5	□□□□□ -1.53
SOD1	YJR104C	PRY3	P47033	881 aa		5.5	□□□□□ -1.53
SOD1	YJR104C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.49	□□□□□ -1.53
SOD1	YJR104C	SPT21	P35209	758 aa		5.49	□□□□□ -1.53
SOD1	YJR104C	RIM101	P33400	625 aa		5.46	□□□□□ -1.54
SOD1	YJR104C	PTP3	P40048	928 aa		5.46	□□□□□ -1.54
SOD1	YJR104C	BCK1	Q01389	1478 aa		5.45	□□□□□ -1.54
SOD1	YJR104C	YBT1	P32386	1661 aa		5.43	□□□□□ -1.54
SOD1	YJR104C	RTT106	P40161	455 aa		5.42	□□□□□ -1.54
SOD1	YJR104C	STH1	P32597	1359 aa		5.4	□□□□□ -1.55
SOD1	YJR104C	VMR1	P38735	1592 aa		5.38	□□□□□ -1.55
SOD1	YJR104C	NUP188	P52593	1655 aa	Known RBP	5.37	□□□□□ -1.55
SOD1	YJR104C	IML1	P47170	1584 aa		5.35	□□□□□ -1.55
SOD1	YJR104C	MRPL32	P25348	183 aa		5.35	□□□□□ -1.55
SOD1	YJR104C	YBL086C	P38177	466 aa		5.35	□□□□□ -1.55
SOD1	YJR104C	URN1	Q06525	465 aa	Known RBP	5.35	□□□□□ -1.55
SOD1	YJR104C	ENV9	Q08651	330 aa		5.35	□□□□□ -1.55
SOD1	YJR104C	PDR11	P40550	1411 aa		5.34	□□□□□ -1.55
SOD1	YJR104C	SSP1	P38871	571 aa		5.33	□□□□□ -1.56
SOD1	YJR104C	SEC7	P11075	2009 aa	Known RBP	5.32	□□□□□ -1.56
SOD1	YJR104C	OXP1	P28273	1286 aa		5.29	□□□□□ -1.56
SOD1	YJR104C	YKR023W	P36119	530 aa	Known RBP	5.29	□□□□□ -1.56
SOD1	YJR104C	DMA1	P38823	416 aa		5.29	□□□□□ -1.56
SOD1	YJR104C	GTT3	P39996	337 aa		5.29	□□□□□ -1.56
SOD1	YJR104C	UGA2	P38067	497 aa		5.28	□□□□□ -1.56
SOD1	YJR104C	IMH1	Q06704	911 aa	Known RBP	5.28	□□□□□ -1.56
SOD1	YJR104C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
SOD1	YJR104C	ENT1	Q12518	454 aa		5.28	□□□□□ -1.56
SOD1	YJR104C	UBP1	P25037	809 aa		5.26	□□□□□ -1.57
SOD1	YJR104C	YRF1-2	P40105	1681 aa		5.24	□□□□□ -1.57
SOD1	YJR104C	SSA4	P22202	642 aa	Known RBP	5.23	□□□□□ -1.57
SOD1	YJR104C	IPL1	P38991	367 aa		5.23	□□□□□ -1.57
SOD1	YJR104C	PDR5	P33302	1511 aa	Known RBP	5.22	□□□□□ -1.57
SOD1	YJR104C	TOM1	Q03280	3268 aa		5.21	□□□□□ -1.57

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